RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 PDCL2Q8N4E4 241 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 MAP3K5Q99683 1374 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 ARHGEF12Q9NZN5 1544 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 EPB41L2O43491 1005 aaKnown RBP15.39■□□□□ 0.05
SMG9-201ENST00000270066 SCLT1Q96NL6 688 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 NEK1Q96PY6 1258 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 UTP14AQ9BVJ6 771 aaKnown RBP15.39■□□□□ 0.05
SMG9-201ENST00000270066 NCKAP5LQ9HCH0 1330 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 IARSP41252 1262 aaKnown RBP15.39■□□□□ 0.05
SMG9-201ENST00000270066 FKBP15Q5T1M5 1219 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 CCDC183Q5T5S1 534 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 IL15P40933 162 aaPredicted RBP15.39■□□□□ 0.05
SMG9-201ENST00000270066 CFAP100Q494V2 611 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 LEKR1Q6ZMV7 388 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 TBC1D9Q6ZT07 1266 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 ATP2B3Q16720 1220 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 YTHDC2Q9H6S0 1430 aaKnown RBP15.38■□□□□ 0.05
SMG9-201ENST00000270066 SLC39A6Q13433 755 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 MRPL50Q8N5N7 158 aaKnown RBP15.38■□□□□ 0.05
SMG9-201ENST00000270066 CCDC82Q8N4S0 544 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 PYM1Q9BRP8 204 aaKnown RBP15.38■□□□□ 0.05
SMG9-201ENST00000270066 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
SMG9-201ENST00000270066 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
SMG9-201ENST00000270066 DCAF5Q96JK2 942 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 HDAC9Q9UKV0 1011 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 USP16Q9Y5T5 823 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 ATP10AO60312 1499 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 PCDH11XQ9BZA7 1347 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 PCDH11YQ9BZA8 1340 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
SMG9-201ENST00000270066 GOLGA6L10A6NI86 522 aa15.37■□□□□ 0.05
SMG9-201ENST00000270066 KRT23Q9C075 422 aa15.37■□□□□ 0.05
SMG9-201ENST00000270066 SYCE3A1L190 88 aa15.37■□□□□ 0.05
SMG9-201ENST00000270066 SOS1Q07889 1333 aaPredicted RBP15.37■□□□□ 0.05
SMG9-201ENST00000270066 PARD3Q8TEW0 1356 aa15.37■□□□□ 0.05
SMG9-201ENST00000270066 CCT2P78371 535 aaKnown RBP15.37■□□□□ 0.05
SMG9-201ENST00000270066 GUCY1B3Q02153 619 aa15.37■□□□□ 0.05
SMG9-201ENST00000270066 CAMK4Q16566 473 aa15.37■□□□□ 0.05
SMG9-201ENST00000270066 KIAA1328Q86T90 577 aa15.37■□□□□ 0.05
SMG9-201ENST00000270066 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMG9-201ENST00000270066 MAST1Q9Y2H9 1570 aa15.37■□□□□ 0.05
SMG9-201ENST00000270066 METAP2P50579 478 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMG9-201ENST00000270066 JAKMIP3Q5VZ66 844 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 TAF4BQ92750 862 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 NUCB1Q02818 461 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 WDR78Q5VTH9 848 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 JARID2Q92833 1246 aaPredicted RBP15.36■□□□□ 0.05
SMG9-201ENST00000270066 ERLIN1O75477 346 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 GCP02774 474 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 MCM5P33992 734 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 ATP8B2P98198 1209 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 PBRM1Q86U86 1689 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 CALRP27797 417 aaKnown RBP15.36■□□□□ 0.05
SMG9-201ENST00000270066 ZNF804AQ7Z570 1209 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
SMG9-201ENST00000270066 TRAF1Q13077 416 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 SIRT1Q96EB6 747 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 CALML4Q96GE6 196 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 MEIS3Q99687 375 aa15.36■□□□□ 0.05
SMG9-201ENST00000270066 AMPD3Q01432 767 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 FILIP1Q7Z7B0 1213 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 ANKRD44Q8N8A2 993 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 MPHOSPH6Q99547 160 aaKnown RBP15.35■□□□□ 0.05
SMG9-201ENST00000270066 CNNM2Q9H8M5 875 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 UHRF1BP1Q6BDS2 1440 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 IP6K1Q92551 441 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
SMG9-201ENST00000270066 LMBR1LQ6UX01 489 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 CABLES1Q8TDN4 633 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 CDCA7Q9BWT1 371 aaPredicted RBP15.35■□□□□ 0.05
SMG9-201ENST00000270066 TCP11L1Q9NUJ3 509 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 ATP7AQ04656 1500 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 GJB2P29033 226 aa15.35■□□□□ 0.05
SMG9-201ENST00000270066 KCNA6P17658 529 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 CYP7A1P22680 504 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 CETN2P41208 172 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 TMTC2Q8N394 836 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 CNNM3Q8NE01 707 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 LINS1Q8NG48 757 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 HAND2P61296 217 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 C8orf58Q8NAV2 365 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 RTCBQ9Y3I0 505 aaKnown RBP15.34■□□□□ 0.05
SMG9-201ENST00000270066 HOXC9P31274 260 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 ARHGAP29Q52LW3 1261 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 TPTE2Q6XPS3 522 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 UBA5Q9GZZ9 404 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 DDX19AQ9NUU7 478 aaKnown RBP15.34■□□□□ 0.05
SMG9-201ENST00000270066 A0A1W2PP64 1363 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 AXDND1Q5T1B0 1012 aaPredicted RBP15.34■□□□□ 0.05
SMG9-201ENST00000270066 VPS36Q86VN1 386 aa15.34■□□□□ 0.05
SMG9-201ENST00000270066 ORC3Q9UBD5 711 aaPredicted RBP15.34■□□□□ 0.05
SMG9-201ENST00000270066 WTAPQ15007 396 aa15.33■□□□□ 0.05
SMG9-201ENST00000270066 SPA17Q15506 151 aa15.33■□□□□ 0.05
SMG9-201ENST00000270066 FAM177A1Q8N128 213 aaPredicted RBP15.33■□□□□ 0.05
SMG9-201ENST00000270066 NFATC2IPQ8NCF5 419 aa15.33■□□□□ 0.05
SMG9-201ENST00000270066 CCDC150Q8NCX0 1101 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms