RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 IPO8O15397 1037 aaKnown RBP31.19■■■□□ 2.58
SSBP4-201ENST00000270061 AAMPQ13685 434 aa31.19■■■□□ 2.58
SSBP4-201ENST00000270061 GIGYF2Q6Y7W6 1299 aaKnown RBP31.19■■■□□ 2.58
SSBP4-201ENST00000270061 PANK1Q8TE04 598 aa31.19■■■□□ 2.58
SSBP4-201ENST00000270061 ZNF622Q969S3 477 aaKnown RBP eCLIP31.19■■■□□ 2.58
SSBP4-201ENST00000270061 CHPF2Q9P2E5 772 aa31.19■■■□□ 2.58
SSBP4-201ENST00000270061 COPS6Q7L5N1 327 aa31.17■■■□□ 2.58
SSBP4-201ENST00000270061 GTF2E1P29083 439 aaPredicted RBP31.17■■■□□ 2.58
SSBP4-201ENST00000270061 AIMP1Q12904 312 aaKnown RBP31.17■■■□□ 2.58
SSBP4-201ENST00000270061 ATF7IPQ6VMQ6 1270 aa31.17■■■□□ 2.58
SSBP4-201ENST00000270061 NYXQ9GZU5 481 aa31.17■■■□□ 2.58
SSBP4-201ENST00000270061 GPTP24298 496 aa31.16■■■□□ 2.58
SSBP4-201ENST00000270061 MRPL50Q8N5N7 158 aaKnown RBP31.16■■■□□ 2.58
SSBP4-201ENST00000270061 XAGE3Q8WTP9 111 aa31.16■■■□□ 2.58
SSBP4-201ENST00000270061 DBF4Q9UBU7 674 aaPredicted RBP31.16■■■□□ 2.58
SSBP4-201ENST00000270061 NOB1Q9ULX3 412 aaKnown RBP31.16■■■□□ 2.58
SSBP4-201ENST00000270061 ANKRD36CQ5JPF3 1778 aa31.16■■■□□ 2.58
SSBP4-201ENST00000270061 ADCY9O60503 1353 aa31.16■■■□□ 2.58
SSBP4-201ENST00000270061 SBF1O95248 1867 aa31.15■■■□□ 2.58
SSBP4-201ENST00000270061 RLBP1P12271 317 aa31.15■■■□□ 2.58
SSBP4-201ENST00000270061 DZIP1LQ8IYY4 767 aaKnown RBP31.15■■■□□ 2.58
SSBP4-201ENST00000270061 ARHGAP45Q92619 1136 aa31.15■■■□□ 2.58
SSBP4-201ENST00000270061 ELL2O00472 640 aaPredicted RBP31.14■■■□□ 2.58
SSBP4-201ENST00000270061 SRGNP10124 158 aa31.14■■■□□ 2.58
SSBP4-201ENST00000270061 UBN2Q6ZU65 1347 aa31.14■■■□□ 2.58
SSBP4-201ENST00000270061 ZNF34Q8IZ26 560 aa31.14■■■□□ 2.58
SSBP4-201ENST00000270061 COG6Q9Y2V7 657 aa31.14■■■□□ 2.58
SSBP4-201ENST00000270061 TRIM27P14373 513 aa31.13■■■□□ 2.57
SSBP4-201ENST00000270061 TNNQ9UQP3 1299 aa31.12■■■□□ 2.57
SSBP4-201ENST00000270061 ARFGEF2Q9Y6D5 1785 aa31.12■■■□□ 2.57
SSBP4-201ENST00000270061 STYK1Q6J9G0 422 aa31.12■■■□□ 2.57
SSBP4-201ENST00000270061 MASTLQ96GX5 879 aa31.12■■■□□ 2.57
SSBP4-201ENST00000270061 SLX4Q8IY92 1834 aa31.11■■■□□ 2.57
SSBP4-201ENST00000270061 IBTKQ9P2D0 1353 aaPredicted RBP31.11■■■□□ 2.57
SSBP4-201ENST00000270061 CNKSR1Q969H4 720 aa31.11■■■□□ 2.57
SSBP4-201ENST00000270061 HYPKQ9NX55 129 aa31.11■■■□□ 2.57
SSBP4-201ENST00000270061 NUTM1Q86Y26 1132 aa31.1■■■□□ 2.57
SSBP4-201ENST00000270061 PARP10Q53GL7 1025 aa31.1■■■□□ 2.57
SSBP4-201ENST00000270061 HSP90AB3PQ58FF7 597 aa31.1■■■□□ 2.57
SSBP4-201ENST00000270061 SUSD4Q5VX71 490 aa31.1■■■□□ 2.57
SSBP4-201ENST00000270061 FTSJ3Q8IY81 847 aaKnown RBP31.1■■■□□ 2.57
SSBP4-201ENST00000270061 CCDC88AQ3V6T2 1871 aa31.09■■■□□ 2.57
SSBP4-201ENST00000270061 KLRG2A4D1S0 409 aaPredicted RBP31.09■■■□□ 2.57
SSBP4-201ENST00000270061 MVPQ14764 893 aaKnown RBP31.09■■■□□ 2.57
SSBP4-201ENST00000270061 PPP1R42Q7Z4L9 355 aa31.08■■■□□ 2.57
SSBP4-201ENST00000270061 CLUAP1Q96AJ1 413 aa31.08■■■□□ 2.57
SSBP4-201ENST00000270061 TNRC6CQ9HCJ0 1690 aaKnown RBP31.08■■■□□ 2.57
SSBP4-201ENST00000270061 ERFEQ4G0M1 354 aa31.07■■■□□ 2.56
SSBP4-201ENST00000270061 CHMP4AQ9BY43 222 aa31.07■■■□□ 2.56
SSBP4-201ENST00000270061 ABCC12Q96J65 1359 aa31.07■■■□□ 2.56
SSBP4-201ENST00000270061 NPR1P16066 1061 aa31.07■■■□□ 2.56
SSBP4-201ENST00000270061 C9orf131Q5VYM1 1079 aa31.06■■■□□ 2.56
SSBP4-201ENST00000270061 NTSR2O95665 410 aa31.05■■■□□ 2.56
SSBP4-201ENST00000270061 PRPF40BQ6NWY9 871 aaKnown RBP31.05■■■□□ 2.56
SSBP4-201ENST00000270061 ANKRD13DQ6ZTN6 518 aa31.05■■■□□ 2.56
SSBP4-201ENST00000270061 PLBD2Q8NHP8 589 aa31.05■■■□□ 2.56
SSBP4-201ENST00000270061 FER1L6Q2WGJ9 1857 aa31.05■■■□□ 2.56
SSBP4-201ENST00000270061 C21orf2O43822 256 aa31.05■■■□□ 2.56
SSBP4-201ENST00000270061 TCIRG1Q13488 830 aa31.05■■■□□ 2.56
SSBP4-201ENST00000270061 ZNF219Q9P2Y4 722 aaPredicted RBP31.05■■■□□ 2.56
SSBP4-201ENST00000270061 ZNF526Q8TF50 670 aaPredicted RBP31.04■■■□□ 2.56
SSBP4-201ENST00000270061 GPBP1L1Q9HC44 474 aaPredicted RBP31.04■■■□□ 2.56
SSBP4-201ENST00000270061 KDM2BQ8NHM5 1336 aa31.04■■■□□ 2.56
SSBP4-201ENST00000270061 RASSF7Q02833 373 aa31.03■■■□□ 2.56
SSBP4-201ENST00000270061 CCDC30Q5VVM6 783 aa31.03■■■□□ 2.56
SSBP4-201ENST00000270061 UTP14AQ9BVJ6 771 aaKnown RBP31.03■■■□□ 2.56
SSBP4-201ENST00000270061 RNF181Q9P0P0 153 aa31.03■■■□□ 2.56
SSBP4-201ENST00000270061 RIC1Q4ADV7 1423 aa31.03■■■□□ 2.56
SSBP4-201ENST00000270061 DDX19BQ9UMR2 479 aa31.02■■■□□ 2.56
SSBP4-201ENST00000270061 CENPQQ7L2Z9 268 aaPredicted RBP31.01■■■□□ 2.55
SSBP4-201ENST00000270061 NLRP10Q86W26 655 aa31.01■■■□□ 2.55
SSBP4-201ENST00000270061 CRY2Q49AN0 593 aa31■■■□□ 2.55
SSBP4-201ENST00000270061 ALDH1B1P30837 517 aa31■■■□□ 2.55
SSBP4-201ENST00000270061 API5Q9BZZ5 524 aaKnown RBP31■■■□□ 2.55
SSBP4-201ENST00000270061 NFKBIEO00221 500 aa30.99■■■□□ 2.55
SSBP4-201ENST00000270061 LMNB1P20700 586 aa30.99■■■□□ 2.55
SSBP4-201ENST00000270061 SOGA3Q5TF21 947 aa30.99■■■□□ 2.55
SSBP4-201ENST00000270061 PHAXQ9H814 394 aaKnown RBP30.99■■■□□ 2.55
SSBP4-201ENST00000270061 TMEM57Q8N5G2 664 aa30.98■■■□□ 2.55
SSBP4-201ENST00000270061 TCERG1O14776 1098 aaKnown RBP30.97■■■□□ 2.55
SSBP4-201ENST00000270061 CACNA1FO60840 1977 aa30.97■■■□□ 2.55
SSBP4-201ENST00000270061 DICER1Q9UPY3 1922 aaKnown RBP30.97■■■□□ 2.55
SSBP4-201ENST00000270061 RPGRQ92834 1020 aaKnown RBP30.97■■■□□ 2.55
SSBP4-201ENST00000270061 ABCC4O15439 1325 aa30.97■■■□□ 2.55
SSBP4-201ENST00000270061 RIC3Q7Z5B4 369 aa30.96■■■□□ 2.55
SSBP4-201ENST00000270061 TRMT112Q9UI30 125 aaKnown RBP30.96■■■□□ 2.55
SSBP4-201ENST00000270061 PTPRCP08575 1304 aa30.95■■■□□ 2.55
SSBP4-201ENST00000270061 NLRP3Q96P20 1036 aa30.95■■■□□ 2.55
SSBP4-201ENST00000270061 SLC10A5Q5PT55 438 aa30.94■■■□□ 2.54
SSBP4-201ENST00000270061 ITPRIPQ8IWB1 547 aa30.94■■■□□ 2.54
SSBP4-201ENST00000270061 C7orf43Q8WVR3 580 aa30.94■■■□□ 2.54
SSBP4-201ENST00000270061 STK31Q9BXU1 1019 aa30.94■■■□□ 2.54
SSBP4-201ENST00000270061 LAMB2P55268 1798 aa30.94■■■□□ 2.54
SSBP4-201ENST00000270061 ISCA1Q9BUE6 129 aa30.94■■■□□ 2.54
SSBP4-201ENST00000270061 TIAM2Q8IVF5 1701 aa30.93■■■□□ 2.54
SSBP4-201ENST00000270061 ATP5J2-PTCD1G3V325 749 aa30.93■■■□□ 2.54
SSBP4-201ENST00000270061 PRELPP51888 382 aa30.93■■■□□ 2.54
SSBP4-201ENST00000270061 TAOK3Q9H2K8 898 aa30.93■■■□□ 2.54
SSBP4-201ENST00000270061 SH3TC1Q8TE82 1336 aa30.92■■■□□ 2.54
SSBP4-201ENST00000270061 HOXA10P31260 410 aaPredicted RBP30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms