RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 RSPH14Q9UHP6 348 aa13.25□□□□□ -0.29
CDH2-201ENST00000269141 CCDC158Q5M9N0 1113 aa13.24□□□□□ -0.29
CDH2-201ENST00000269141 IFIT5Q13325 482 aaKnown RBP13.24□□□□□ -0.29
CDH2-201ENST00000269141 LINS1Q8NG48 757 aa13.24□□□□□ -0.29
CDH2-201ENST00000269141 MTMR7Q9Y216 660 aa13.24□□□□□ -0.29
CDH2-201ENST00000269141 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
CDH2-201ENST00000269141 FAM89AQ96GI7 184 aa13.24□□□□□ -0.29
CDH2-201ENST00000269141 CPS1P31327 1500 aa13.24□□□□□ -0.29
CDH2-201ENST00000269141 VPS37CA5D8V6 355 aaPredicted RBP13.23□□□□□ -0.29
CDH2-201ENST00000269141 IDH1O75874 414 aaKnown RBP13.23□□□□□ -0.29
CDH2-201ENST00000269141 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
CDH2-201ENST00000269141 ADGRL3Q9HAR2 1447 aa13.23□□□□□ -0.29
CDH2-201ENST00000269141 SDSP20132 328 aa13.23□□□□□ -0.29
CDH2-201ENST00000269141 ZRSR1Q15695 479 aaKnown RBP13.23□□□□□ -0.29
CDH2-201ENST00000269141 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
CDH2-201ENST00000269141 ZPR1O75312 459 aa13.23□□□□□ -0.29
CDH2-201ENST00000269141 C8orf34Q49A92 452 aa13.23□□□□□ -0.29
CDH2-201ENST00000269141 MCTP1Q6DN14 999 aa13.23□□□□□ -0.29
CDH2-201ENST00000269141 ABCF2Q9UG63 623 aa13.23□□□□□ -0.29
CDH2-201ENST00000269141 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
CDH2-201ENST00000269141 H0YHG0 523 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 SARNPP82979 210 aaKnown RBP13.22□□□□□ -0.29
CDH2-201ENST00000269141 ATP8B2P98198 1209 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 SMC5Q8IY18 1101 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 CCDC24Q8N4L8 307 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 RAD21O60216 631 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 RNF20Q5VTR2 975 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 STK3Q13188 491 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 C10orf67Q8IYJ2 551 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 PAIP2Q9BPZ3 127 aaKnown RBP13.22□□□□□ -0.29
CDH2-201ENST00000269141 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 RNF214Q8ND24 703 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
CDH2-201ENST00000269141 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
CDH2-201ENST00000269141 IQSEC3Q9UPP2 1182 aaPredicted RBP13.22□□□□□ -0.29
CDH2-201ENST00000269141 PDE1AP54750 535 aa13.21□□□□□ -0.29
CDH2-201ENST00000269141 HELBQ8NG08 1087 aaPredicted RBP13.21□□□□□ -0.29
CDH2-201ENST00000269141 ARHGEF28Q8N1W1 1705 aaKnown RBP13.21□□□□□ -0.29
CDH2-201ENST00000269141 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
CDH2-201ENST00000269141 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
CDH2-201ENST00000269141 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
CDH2-201ENST00000269141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDH2-201ENST00000269141 FAM184AQ8NB25 1140 aa13.21□□□□□ -0.29
CDH2-201ENST00000269141 WWC3Q9ULE0 1092 aa13.21□□□□□ -0.29
CDH2-201ENST00000269141 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.3
CDH2-201ENST00000269141 RRP12Q5JTH9 1297 aaKnown RBP13.21□□□□□ -0.3
CDH2-201ENST00000269141 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 RASSF4Q9H2L5 321 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 LRRFIP1Q32MZ4 808 aaKnown RBP13.2□□□□□ -0.3
CDH2-201ENST00000269141 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
CDH2-201ENST00000269141 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
CDH2-201ENST00000269141 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
CDH2-201ENST00000269141 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 BMP2KLQ5H9B9 411 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
CDH2-201ENST00000269141 KDM2BQ8NHM5 1336 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 IFT172Q9UG01 1749 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 GIMAP7Q8NHV1 300 aa13.2□□□□□ -0.3
CDH2-201ENST00000269141 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 H3BQV1 296 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 CYP27B1O15528 508 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 TRDNQ13061 729 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 TTC22Q5TAA0 569 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 IFFO2Q5TF58 517 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 CTR9Q6PD62 1173 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 USP44Q9H0E7 712 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 RIMS1Q86UR5 1692 aaKnown RBP13.19□□□□□ -0.3
CDH2-201ENST00000269141 TEX13AQ9BXU3 409 aaPredicted RBP13.19□□□□□ -0.3
CDH2-201ENST00000269141 ECHDC1Q9NTX5 307 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 CDK12Q9NYV4 1490 aaPredicted RBP13.19□□□□□ -0.3
CDH2-201ENST00000269141 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
CDH2-201ENST00000269141 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDH2-201ENST00000269141 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
CDH2-201ENST00000269141 MYO3AQ8NEV4 1616 aa13.18□□□□□ -0.3
CDH2-201ENST00000269141 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
CDH2-201ENST00000269141 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
CDH2-201ENST00000269141 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
CDH2-201ENST00000269141 ZNF594Q96JF6 807 aaPredicted RBP13.18□□□□□ -0.3
CDH2-201ENST00000269141 MYOM1P52179 1685 aa13.18□□□□□ -0.3
CDH2-201ENST00000269141 KDM4FA0A1W2PPD8 638 aa13.18□□□□□ -0.3
CDH2-201ENST00000269141 PPFIA3O75145 1194 aa13.18□□□□□ -0.3
CDH2-201ENST00000269141 IGHMBP2P38935 993 aaKnown RBP13.18□□□□□ -0.3
CDH2-201ENST00000269141 PRPF40BQ6NWY9 871 aaKnown RBP13.18□□□□□ -0.3
CDH2-201ENST00000269141 SMC3Q9UQE7 1217 aa13.18□□□□□ -0.3
CDH2-201ENST00000269141 LRCH2Q5VUJ6 765 aa13.18□□□□□ -0.3
CDH2-201ENST00000269141 PLEKHM2Q8IWE5 1019 aa13.18□□□□□ -0.3
CDH2-201ENST00000269141 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
CDH2-201ENST00000269141 USP21Q9UK80 565 aa13.17□□□□□ -0.3
CDH2-201ENST00000269141 PNPLA6Q8IY17 1366 aa13.17□□□□□ -0.3
CDH2-201ENST00000269141 CPLX1O14810 134 aa13.17□□□□□ -0.3
CDH2-201ENST00000269141 ALDH1L1O75891 902 aa13.17□□□□□ -0.3
CDH2-201ENST00000269141 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
CDH2-201ENST00000269141 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
CDH2-201ENST00000269141 RABEP1Q15276 862 aa13.17□□□□□ -0.3
CDH2-201ENST00000269141 SKIDA1Q1XH10 827 aa13.17□□□□□ -0.3
CDH2-201ENST00000269141 ZNF652Q9Y2D9 606 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms