RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 MTMR7Q9Y216 660 aa17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 MYO5BQ9ULV0 1848 aa17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 NEURL1BA8MQ27 555 aa17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 TRIM29Q14134 588 aa17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 HELBQ8NG08 1087 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 CTNNA3Q9UI47 895 aa17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 TRPC5Q9UL62 973 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 DHX16O60231 1041 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 HCLS1P14317 486 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 TDO2P48775 406 aa17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 BRPF1P55201 1214 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 TFCP2Q12800 502 aa17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 SART3Q15020 963 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 STK3Q13188 491 aa17.28■□□□□ 0.36
PDLIM2-201ENST00000265810 MAP3K12Q12852 859 aa17.27■□□□□ 0.36
PDLIM2-201ENST00000265810 C6orf229H3BNL8 230 aa17.27■□□□□ 0.35
PDLIM2-201ENST00000265810 PIGBQ92521 554 aa17.27■□□□□ 0.35
PDLIM2-201ENST00000265810 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.35
PDLIM2-201ENST00000265810 LOC102724428A0A0B4J2F2 783 aa17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 KDM4AO75164 1064 aa17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 CASTP20810 708 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 SIK1P57059 783 aa17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 C8orf34Q49A92 452 aa17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 SH3TC1Q8TE82 1336 aa17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 ST5P78524 1137 aa17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 PDRG1Q9NUG6 133 aa17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
PDLIM2-201ENST00000265810 DEKP35659 375 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-201ENST00000265810 NYXQ9GZU5 481 aa17.25■□□□□ 0.35
PDLIM2-201ENST00000265810 IQSEC3Q9UPP2 1182 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-201ENST00000265810 SLC3A2P08195 630 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-201ENST00000265810 ZNF594Q96JF6 807 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-201ENST00000265810 KRT32Q14532 448 aa17.24■□□□□ 0.35
PDLIM2-201ENST00000265810 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-201ENST00000265810 C3P01024 1663 aa17.24■□□□□ 0.35
PDLIM2-201ENST00000265810 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
PDLIM2-201ENST00000265810 PARP10Q53GL7 1025 aa17.24■□□□□ 0.35
PDLIM2-201ENST00000265810 ZNF622Q969S3 477 aaKnown RBP eCLIP17.24■□□□□ 0.35
PDLIM2-201ENST00000265810 ERBB4Q15303 1308 aa17.24■□□□□ 0.35
PDLIM2-201ENST00000265810 TIMM10P62072 90 aa17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 ANKRD1Q15327 319 aa17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 IMMTQ16891 758 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 KDRP35968 1356 aa17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 ZBTB1Q9Y2K1 713 aa17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 SOS2Q07890 1332 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 ITGA6P23229 1130 aa17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 U3KPZ7 1027 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-201ENST00000265810 EYA2O00167 538 aa17.22■□□□□ 0.35
PDLIM2-201ENST00000265810 KCNQ4P56696 695 aa17.22■□□□□ 0.35
PDLIM2-201ENST00000265810 RASSF8Q8NHQ8 419 aa17.22■□□□□ 0.35
PDLIM2-201ENST00000265810 TBC1D32Q96NH3 1257 aa17.22■□□□□ 0.35
PDLIM2-201ENST00000265810 THRAP3Q9Y2W1 955 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-201ENST00000265810 TTC41PQ6P2S7 1318 aa17.22■□□□□ 0.35
PDLIM2-201ENST00000265810 UBR1Q8IWV7 1749 aa17.22■□□□□ 0.35
PDLIM2-201ENST00000265810 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
PDLIM2-201ENST00000265810 CERKQ8TCT0 537 aa17.21■□□□□ 0.35
PDLIM2-201ENST00000265810 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-201ENST00000265810 PDE8AO60658 829 aa17.21■□□□□ 0.35
PDLIM2-201ENST00000265810 UQCRFS1P1P0C7P4 283 aa17.21■□□□□ 0.35
PDLIM2-201ENST00000265810 TTF1Q15361 905 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-201ENST00000265810 HEG1Q9ULI3 1381 aa17.21■□□□□ 0.34
PDLIM2-201ENST00000265810 MINDY4BA8MYZ0 360 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 NAPBQ9H115 298 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 APBA3O96018 575 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 ESYT1Q9BSJ8 1104 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 SEC24BO95487 1268 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 MST1RQ04912 1400 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 GOLGA6L3A6NEY3 463 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 CRKLP46109 303 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 SSH3Q8TE77 659 aa17.2■□□□□ 0.34
PDLIM2-201ENST00000265810 MARCH6O60337 910 aa17.19■□□□□ 0.34
PDLIM2-201ENST00000265810 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-201ENST00000265810 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
PDLIM2-201ENST00000265810 NCAPD2Q15021 1401 aa17.19■□□□□ 0.34
PDLIM2-201ENST00000265810 SAFBQ15424 915 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDLIM2-201ENST00000265810 PDCP20941 246 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 DBNDD2Q9BQY9 259 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 A0A1B0GUL7 405 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 TNNI3KQ59H18 835 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 VPS53Q5VIR6 699 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 SEPT12Q8IYM1 358 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 CWC22Q9HCG8 908 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 FPGT-TNNI3KV9GXZ4 949 aa17.18■□□□□ 0.34
PDLIM2-201ENST00000265810 PRKCSHP14314 528 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-201ENST00000265810 NSFL1CQ9UNZ2 370 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-201ENST00000265810 MAP3K15Q6ZN16 1313 aa17.17■□□□□ 0.34
PDLIM2-201ENST00000265810 DCCP43146 1447 aa17.17■□□□□ 0.34
PDLIM2-201ENST00000265810 ZNF213O14771 459 aa17.17■□□□□ 0.34
PDLIM2-201ENST00000265810 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms