RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 KDM2BQ8NHM5 1336 aa9.64□□□□□ -0.87
COL6A5-201ENST00000265379 AACSQ86V21 672 aa9.64□□□□□ -0.87
COL6A5-201ENST00000265379 ANKRD18AQ8IVF6 992 aa9.64□□□□□ -0.87
COL6A5-201ENST00000265379 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
COL6A5-201ENST00000265379 IL2RBP14784 551 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 NEK4P51957 841 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 PARP10Q53GL7 1025 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 PAF1Q8N7H5 531 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 NEMFO60524 1076 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 VAMP4O75379 141 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 CCDC184Q52MB2 194 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 NOL7Q9UMY1 257 aaKnown RBP9.63□□□□□ -0.87
COL6A5-201ENST00000265379 SLC5A1P13866 664 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 IFIT5Q13325 482 aaKnown RBP9.63□□□□□ -0.87
COL6A5-201ENST00000265379 NFKBIBQ15653 356 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 CNNM2Q9H8M5 875 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 MSH5O43196 834 aa9.63□□□□□ -0.87
COL6A5-201ENST00000265379 FOXD4L6Q3SYB3 417 aaPredicted RBP9.63□□□□□ -0.87
COL6A5-201ENST00000265379 FOXD4L3Q6VB84 417 aaPredicted RBP9.63□□□□□ -0.87
COL6A5-201ENST00000265379 CBFA2T2O43439 604 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 GSTO1P78417 241 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 WASHC4Q2M389 1173 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 PHF23Q9BUL5 403 aaPredicted RBP9.62□□□□□ -0.87
COL6A5-201ENST00000265379 CARMIL3Q8ND23 1372 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 CFAP57Q96MR6 1250 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 ZSCAN16Q9H4T2 348 aaPredicted RBP9.62□□□□□ -0.87
COL6A5-201ENST00000265379 LUC7LQ9NQ29 371 aaKnown RBP9.62□□□□□ -0.87
COL6A5-201ENST00000265379 ABCC6O95255 1503 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 MAP3K12Q12852 859 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 NYXQ9GZU5 481 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 CCDC12Q8WUD4 166 aaPredicted RBP9.62□□□□□ -0.87
COL6A5-201ENST00000265379 DDX21Q9NR30 783 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL6A5-201ENST00000265379 LIMCH1Q9UPQ0 1083 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 ERLIN2O94905 339 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 LDHCP07864 332 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 CNNM1Q9NRU3 951 aa9.62□□□□□ -0.87
COL6A5-201ENST00000265379 GOLGA6L10A6NI86 522 aa9.61□□□□□ -0.87
COL6A5-201ENST00000265379 EXOC5O00471 708 aa9.61□□□□□ -0.87
COL6A5-201ENST00000265379 ANKRD18BA2A2Z9 1011 aa9.61□□□□□ -0.87
COL6A5-201ENST00000265379 HS1BP3Q53T59 392 aa9.61□□□□□ -0.87
COL6A5-201ENST00000265379 KDRP35968 1356 aa9.61□□□□□ -0.87
COL6A5-201ENST00000265379 CCDC175P0C221 793 aa9.61□□□□□ -0.87
COL6A5-201ENST00000265379 HOXA7P31268 230 aaPredicted RBP9.61□□□□□ -0.87
COL6A5-201ENST00000265379 RBM25P49756 843 aaKnown RBP9.6□□□□□ -0.87
COL6A5-201ENST00000265379 GRM8O00222 908 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 NEUROD6Q96NK8 337 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 STIM1Q13586 685 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 PDRG1Q9NUG6 133 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 GCP02774 474 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 MCM10Q7L590 875 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 GIMAP7Q8NHV1 300 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
COL6A5-201ENST00000265379 NASPP49321 788 aaPredicted RBP9.6□□□□□ -0.87
COL6A5-201ENST00000265379 SYCP1Q15431 976 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 CAVIN4Q5BKX8 364 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 TMCO5BA8MYB1 307 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 PLCG2P16885 1265 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 SMARCE1Q969G3 411 aa9.6□□□□□ -0.87
COL6A5-201ENST00000265379 TSPY26PQ9H489 355 aa9.59□□□□□ -0.87
COL6A5-201ENST00000265379 MYO1BO43795 1136 aa9.59□□□□□ -0.87
COL6A5-201ENST00000265379 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
COL6A5-201ENST00000265379 DDX19AQ9NUU7 478 aaKnown RBP9.59□□□□□ -0.87
COL6A5-201ENST00000265379 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
COL6A5-201ENST00000265379 SEPT7Q16181 437 aaKnown RBP9.59□□□□□ -0.87
COL6A5-201ENST00000265379 LEKR1Q6ZMV7 388 aa9.59□□□□□ -0.87
COL6A5-201ENST00000265379 CEP57L1Q8IYX8 460 aa9.59□□□□□ -0.87
COL6A5-201ENST00000265379 TRAK2O60296 914 aa9.59□□□□□ -0.87
COL6A5-201ENST00000265379 KIF20AO95235 890 aa9.59□□□□□ -0.87
COL6A5-201ENST00000265379 KANK3Q6NY19 840 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 CCDC152Q4G0S7 254 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 MCM4P33991 863 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 MYH11P35749 1972 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 METP08581 1390 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 TUBB4BP68371 445 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 ARHGAP23Q9P227 1491 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 FAM43AQ8N2R8 423 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 DCAF8L1A6NGE4 600 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 EZRP15311 586 aaKnown RBP9.58□□□□□ -0.88
COL6A5-201ENST00000265379 KIF5BP33176 963 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 SMTNL1A8MU46 457 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 TMEM132AQ24JP5 1023 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 LRRC27Q9C0I9 530 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 KRT23Q9C075 422 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 ANKRD2Q9GZV1 360 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 GPR108Q9NPR9 543 aa9.58□□□□□ -0.88
COL6A5-201ENST00000265379 LRRFIP2Q9Y608 721 aaKnown RBP9.58□□□□□ -0.88
COL6A5-201ENST00000265379 ZNF853P0CG23 659 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 FEZ1Q99689 392 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 ATG3Q9NT62 314 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 FOXO3O43524 673 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 RAB34Q9BZG1 259 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 RNMTO43148 476 aaKnown RBP9.57□□□□□ -0.88
COL6A5-201ENST00000265379 KLHL40Q2TBA0 621 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 FILIP1LQ4L180 1135 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 AIDAQ96BJ3 306 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 IQSEC2Q5JU85 1478 aa9.57□□□□□ -0.88
COL6A5-201ENST00000265379 VPS37CA5D8V6 355 aaPredicted RBP9.57□□□□□ -0.88
COL6A5-201ENST00000265379 CALM1P0DP23 149 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms