RNA–Protein interactions for RNA: ENST00000265164.6

CASP6-201, Transcript of caspase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP6, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-201ENST00000265164 GPTP24298 496 aa25.39■■□□□ 1.66
CASP6-201ENST00000265164 RARSP54136 660 aaKnown RBP25.39■■□□□ 1.66
CASP6-201ENST00000265164 TWISTNBQ3B726 338 aaPredicted RBP25.39■■□□□ 1.66
CASP6-201ENST00000265164 NUTM1Q86Y26 1132 aa25.39■■□□□ 1.66
CASP6-201ENST00000265164 TSPYL6Q8N831 410 aa25.39■■□□□ 1.66
CASP6-201ENST00000265164 ZNF428Q96B54 188 aa25.39■■□□□ 1.66
CASP6-201ENST00000265164 VAMP4O75379 141 aa25.38■■□□□ 1.65
CASP6-201ENST00000265164 ELL2O00472 640 aaPredicted RBP25.37■■□□□ 1.65
CASP6-201ENST00000265164 ANKRD36CQ5JPF3 1778 aa25.37■■□□□ 1.65
CASP6-201ENST00000265164 GIGYF2Q6Y7W6 1299 aaKnown RBP25.37■■□□□ 1.65
CASP6-201ENST00000265164 NEFLP07196 543 aa25.36■■□□□ 1.65
CASP6-201ENST00000265164 GTF2E1P29083 439 aaPredicted RBP25.36■■□□□ 1.65
CASP6-201ENST00000265164 ERFEQ4G0M1 354 aa25.36■■□□□ 1.65
CASP6-201ENST00000265164 KDM2BQ8NHM5 1336 aa25.35■■□□□ 1.65
CASP6-201ENST00000265164 BCAR3O75815 825 aa25.35■■□□□ 1.65
CASP6-201ENST00000265164 NPR1P16066 1061 aa25.35■■□□□ 1.65
CASP6-201ENST00000265164 RRP1P56182 461 aaKnown RBP25.35■■□□□ 1.65
CASP6-201ENST00000265164 SUSD4Q5VX71 490 aa25.35■■□□□ 1.65
CASP6-201ENST00000265164 ZNF34Q8IZ26 560 aa25.35■■□□□ 1.65
CASP6-201ENST00000265164 ZC3H4Q9UPT8 1303 aaKnown RBP25.34■■□□□ 1.65
CASP6-201ENST00000265164 NYXQ9GZU5 481 aa25.34■■□□□ 1.65
CASP6-201ENST00000265164 C7orf43Q8WVR3 580 aa25.33■■□□□ 1.65
CASP6-201ENST00000265164 IBTKQ9P2D0 1353 aaPredicted RBP25.33■■□□□ 1.65
CASP6-201ENST00000265164 TOMM70O94826 608 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 ALDH1L2Q3SY69 923 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 OLFM4Q6UX06 510 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 COPS6Q7L5N1 327 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.32■■□□□ 1.64
CASP6-201ENST00000265164 RRAGCQ9HB90 399 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 NTSR2O95665 410 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 HSPA6P17066 643 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 AIMP1Q12904 312 aaKnown RBP25.32■■□□□ 1.64
CASP6-201ENST00000265164 SSH1Q8WYL5 1049 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 TAOK3Q9H2K8 898 aa25.32■■□□□ 1.64
CASP6-201ENST00000265164 LTBP3Q9NS15 1303 aa25.31■■□□□ 1.64
CASP6-201ENST00000265164 CRY2Q49AN0 593 aa25.31■■□□□ 1.64
CASP6-201ENST00000265164 XAGE3Q8WTP9 111 aa25.31■■□□□ 1.64
CASP6-201ENST00000265164 DDX21Q9NR30 783 aaKnown RBP eCLIP25.31■■□□□ 1.64
CASP6-201ENST00000265164 SMC4Q9NTJ3 1288 aa25.31■■□□□ 1.64
CASP6-201ENST00000265164 CHPF2Q9P2E5 772 aa25.31■■□□□ 1.64
CASP6-201ENST00000265164 BCL2L13Q9BXK5 485 aa25.3■■□□□ 1.64
CASP6-201ENST00000265164 RIC1Q4ADV7 1423 aa25.29■■□□□ 1.64
CASP6-201ENST00000265164 GLTPD2A6NH11 291 aa25.29■■□□□ 1.64
CASP6-201ENST00000265164 GTF3C3Q9Y5Q9 886 aa25.29■■□□□ 1.64
CASP6-201ENST00000265164 SOGA3Q5TF21 947 aa25.28■■□□□ 1.64
CASP6-201ENST00000265164 HDGFL1Q5TGJ6 251 aa25.28■■□□□ 1.64
CASP6-201ENST00000265164 PLIN1O60240 522 aa25.27■■□□□ 1.64
CASP6-201ENST00000265164 CCDC93Q567U6 631 aa25.27■■□□□ 1.64
CASP6-201ENST00000265164 C3orf67Q6ZVT6 689 aa25.27■■□□□ 1.64
CASP6-201ENST00000265164 LAMB2P55268 1798 aa25.27■■□□□ 1.64
CASP6-201ENST00000265164 HOXB7P09629 217 aa25.27■■□□□ 1.64
CASP6-201ENST00000265164 ALDH1B1P30837 517 aa25.26■■□□□ 1.63
CASP6-201ENST00000265164 BRPF1P55201 1214 aaPredicted RBP25.26■■□□□ 1.63
CASP6-201ENST00000265164 PARP10Q53GL7 1025 aa25.26■■□□□ 1.63
CASP6-201ENST00000265164 PPP1R42Q7Z4L9 355 aa25.26■■□□□ 1.63
CASP6-201ENST00000265164 CHMP4AQ9BY43 222 aa25.26■■□□□ 1.63
CASP6-201ENST00000265164 WDR90Q96KV7 1748 aa25.26■■□□□ 1.63
CASP6-201ENST00000265164 SLC51AQ86UW1 340 aa25.25■■□□□ 1.63
CASP6-201ENST00000265164 C16orf71Q8IYS4 520 aaPredicted RBP25.25■■□□□ 1.63
CASP6-201ENST00000265164 SNED1Q8TER0 1413 aa25.25■■□□□ 1.63
CASP6-201ENST00000265164 IRX6P78412 446 aaPredicted RBP25.24■■□□□ 1.63
CASP6-201ENST00000265164 RBM46Q8TBY0 533 aaKnown RBP25.24■■□□□ 1.63
CASP6-201ENST00000265164 FRAT1Q92837 279 aaPredicted RBP25.24■■□□□ 1.63
CASP6-201ENST00000265164 TCERG1O14776 1098 aaKnown RBP25.23■■□□□ 1.63
CASP6-201ENST00000265164 CCDC30Q5VVM6 783 aa25.23■■□□□ 1.63
CASP6-201ENST00000265164 MRPL50Q8N5N7 158 aaKnown RBP25.23■■□□□ 1.63
CASP6-201ENST00000265164 UTP14AQ9BVJ6 771 aaKnown RBP25.23■■□□□ 1.63
CASP6-201ENST00000265164 FKBP4Q02790 459 aaKnown RBP eCLIP25.22■■□□□ 1.63
CASP6-201ENST00000265164 NLRP10Q86W26 655 aa25.22■■□□□ 1.63
CASP6-201ENST00000265164 RPGRQ92834 1020 aaKnown RBP25.22■■□□□ 1.63
CASP6-201ENST00000265164 DBF4Q9UBU7 674 aaPredicted RBP25.22■■□□□ 1.63
CASP6-201ENST00000265164 POTECB2RU33 542 aa25.22■■□□□ 1.63
CASP6-201ENST00000265164 HOXA10P31260 410 aaPredicted RBP25.22■■□□□ 1.63
CASP6-201ENST00000265164 TCIRG1Q13488 830 aa25.22■■□□□ 1.63
CASP6-201ENST00000265164 SYNE4Q8N205 404 aa25.22■■□□□ 1.63
CASP6-201ENST00000265164 ZNF277Q9NRM2 450 aaPredicted RBP25.22■■□□□ 1.63
CASP6-201ENST00000265164 KIF16BQ96L93 1317 aa25.21■■□□□ 1.63
CASP6-201ENST00000265164 HSP90AB3PQ58FF7 597 aa25.21■■□□□ 1.63
CASP6-201ENST00000265164 IPO8O15397 1037 aaKnown RBP25.2■■□□□ 1.62
CASP6-201ENST00000265164 DPY19L2Q6NUT2 758 aa25.2■■□□□ 1.62
CASP6-201ENST00000265164 RTKN2Q8IZC4 609 aa25.2■■□□□ 1.62
CASP6-201ENST00000265164 STK31Q9BXU1 1019 aa25.2■■□□□ 1.62
CASP6-201ENST00000265164 DDX60Q8IY21 1712 aaKnown RBP25.19■■□□□ 1.62
CASP6-201ENST00000265164 VEGFAP15692 232 aaPredicted RBP25.19■■□□□ 1.62
CASP6-201ENST00000265164 SLC10A5Q5PT55 438 aa25.19■■□□□ 1.62
CASP6-201ENST00000265164 ZKSCAN2Q63HK3 967 aa25.19■■□□□ 1.62
CASP6-201ENST00000265164 PLBD2Q8NHP8 589 aa25.19■■□□□ 1.62
CASP6-201ENST00000265164 NOB1Q9ULX3 412 aaKnown RBP25.19■■□□□ 1.62
CASP6-201ENST00000265164 DDNO94850 711 aaPredicted RBP25.18■■□□□ 1.62
CASP6-201ENST00000265164 NLRP3Q96P20 1036 aa25.18■■□□□ 1.62
CASP6-201ENST00000265164 TAF1P21675 1872 aa25.18■■□□□ 1.62
CASP6-201ENST00000265164 SLC4A2P04920 1241 aa25.17■■□□□ 1.62
CASP6-201ENST00000265164 ANKRD13DQ6ZTN6 518 aa25.17■■□□□ 1.62
CASP6-201ENST00000265164 RBM17Q96I25 401 aaKnown RBP25.17■■□□□ 1.62
CASP6-201ENST00000265164 CRAMP1Q96RY5 1269 aa25.17■■□□□ 1.62
CASP6-201ENST00000265164 HCLS1P14317 486 aaPredicted RBP25.17■■□□□ 1.62
CASP6-201ENST00000265164 PDE3AQ14432 1141 aa25.17■■□□□ 1.62
CASP6-201ENST00000265164 HYPKQ9NX55 129 aa25.17■■□□□ 1.62
CASP6-201ENST00000265164 TRMT112Q9UI30 125 aaKnown RBP25.17■■□□□ 1.62
CASP6-201ENST00000265164 COL4A5P29400 1685 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms