RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 LRP6O75581 1613 aa12.88□□□□□ -0.35
GTF3C2-201ENST00000264720 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
GTF3C2-201ENST00000264720 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 UTP14CQ5TAP6 766 aaKnown RBP12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 UBR2Q8IWV8 1755 aa12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 U2AF2P26368 475 aaKnown RBP eCLIP12.87□□□□□ -0.356e-12■■■□□ 15.3
GTF3C2-201ENST00000264720 PIGBQ92521 554 aa12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 PAPPAQ13219 1627 aa12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
GTF3C2-201ENST00000264720 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 STARD3NLO95772 234 aa12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 VPS72Q15906 364 aa12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 KIF20AO95235 890 aa12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 GTPBP4Q9BZE4 634 aaKnown RBP12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
GTF3C2-201ENST00000264720 METTL22Q9BUU2 404 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-201ENST00000264720 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
GTF3C2-201ENST00000264720 ITGB4P16144 1822 aa12.85□□□□□ -0.35
GTF3C2-201ENST00000264720 A0A0G2JS52 829 aa12.85□□□□□ -0.35
GTF3C2-201ENST00000264720 KIAA2012Q0VF49 1180 aa12.85□□□□□ -0.35
GTF3C2-201ENST00000264720 PLBD2Q8NHP8 589 aa12.85□□□□□ -0.35
GTF3C2-201ENST00000264720 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
GTF3C2-201ENST00000264720 ASAP1Q9ULH1 1129 aa12.84□□□□□ -0.35
GTF3C2-201ENST00000264720 BCL9O00512 1426 aa12.84□□□□□ -0.35
GTF3C2-201ENST00000264720 GRM8O00222 908 aa12.84□□□□□ -0.35
GTF3C2-201ENST00000264720 FNBP4Q8N3X1 1017 aaPredicted RBP12.84□□□□□ -0.35
GTF3C2-201ENST00000264720 MYD88Q99836 296 aa12.84□□□□□ -0.35
GTF3C2-201ENST00000264720 RBSNQ9H1K0 784 aa12.84□□□□□ -0.35
GTF3C2-201ENST00000264720 USP21Q9UK80 565 aa12.84□□□□□ -0.35
GTF3C2-201ENST00000264720 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
GTF3C2-201ENST00000264720 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
GTF3C2-201ENST00000264720 HSP90AB4PQ58FF6 505 aa12.83□□□□□ -0.36
GTF3C2-201ENST00000264720 ZKSCAN5Q9Y2L8 839 aa12.83□□□□□ -0.36
GTF3C2-201ENST00000264720 NBPF7P0C2Y1 421 aaPredicted RBP12.83□□□□□ -0.36
GTF3C2-201ENST00000264720 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.36
GTF3C2-201ENST00000264720 APBB1O00213 710 aa12.83□□□□□ -0.36
GTF3C2-201ENST00000264720 CWF19L2Q2TBE0 894 aaKnown RBP12.83□□□□□ -0.36
GTF3C2-201ENST00000264720 A1BGP04217 495 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 SSH3Q8TE77 659 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 GLI3P10071 1580 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 SRGAP3O43295 1099 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 LRP10Q7Z4F1 713 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 LRRCC1Q9C099 1032 aa12.82□□□□□ -0.36
GTF3C2-201ENST00000264720 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 NEURL1BA8MQ27 555 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 DNAJC10Q8IXB1 793 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 PPP1R9BQ96SB3 815 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 KIF3AQ9Y496 699 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 SYCE3A1L190 88 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 HSPA1LP34931 641 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 BMP2KLQ5H9B9 411 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 MARCH10Q8NA82 808 aaPredicted RBP12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 BCL9LQ86UU0 1499 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 KIF6Q6ZMV9 814 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 EXOC6BQ9Y2D4 811 aa12.81□□□□□ -0.36
GTF3C2-201ENST00000264720 UTYO14607 1347 aa12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 GCKRQ14397 625 aa12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 CCDC39Q9UFE4 941 aa12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 DOT1LQ8TEK3 1739 aa12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 SURF6O75683 361 aaKnown RBP12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 POLA2Q14181 598 aa12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
GTF3C2-201ENST00000264720 CHAF1AQ13111 956 aaPredicted RBP12.79□□□□□ -0.36
GTF3C2-201ENST00000264720 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
GTF3C2-201ENST00000264720 MTX1Q13505 466 aa12.79□□□□□ -0.36
GTF3C2-201ENST00000264720 SECISBP2LQ93073 1101 aaKnown RBP12.79□□□□□ -0.36
GTF3C2-201ENST00000264720 ACSBG1Q96GR2 724 aa12.79□□□□□ -0.36
GTF3C2-201ENST00000264720 TERF1P54274 439 aa12.79□□□□□ -0.36
GTF3C2-201ENST00000264720 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 ARFGEF2Q9Y6D5 1785 aa12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 APPP05067 770 aa12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 ERC1Q8IUD2 1116 aa12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 TMX1Q9H3N1 280 aa12.78□□□□□ -0.36
GTF3C2-201ENST00000264720 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms