RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 UNC13BO14795 1591 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 FGFR1OPO95684 399 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 SPECC1LQ69YQ0 1117 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 CCDC12Q8WUD4 166 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 FLIIQ13045 1269 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 ANKS4BQ8N8V4 417 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 CLGNO14967 610 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 CCDC102BQ68D86 513 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 CABP1Q9NZU7 370 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 PAFAH1B1P43034 410 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 DACT1Q9NYF0 836 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 ARFGAP2Q8N6H7 521 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 HSPA4P34932 840 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 ARHGAP25P42331 645 aa13.45□□□□□ -0.26
DNMT3A-201ENST00000264709 PTGS1P23219 599 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 NOS1P29475 1434 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 ZNF75DP51815 510 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 MYOM2P54296 1465 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 CNGA4Q8IV77 575 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 AFAP1Q8N556 730 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 MAGI3Q5TCQ9 1506 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 VPS36Q86VN1 386 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 GPR161Q8N6U8 529 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 GDPD2Q9HCC8 539 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 BRD3Q15059 726 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 DYDC1Q8WWB3 177 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 WASHC4Q2M389 1173 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 CCDC43Q96MW1 224 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 TRMT1Q9NXH9 659 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 ARHGAP6O43182 974 aa13.44□□□□□ -0.26
DNMT3A-201ENST00000264709 WDR7Q9Y4E6 1490 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 CDC25BP30305 580 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 CTDP1Q9Y5B0 961 aaPredicted RBP13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 MYCBPQ99417 103 aaPredicted RBP13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 CEP152O94986 1710 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 FAM114A1Q8IWE2 563 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 UBASH3AP57075 661 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 GOLGA5Q8TBA6 731 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 TM6SF1Q9BZW5 370 aa13.43□□□□□ -0.26
DNMT3A-201ENST00000264709 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 TACO1Q9BSH4 297 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 RTL1A6NKG5 1358 aa13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 KIAA0232Q92628 1395 aa13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 KRI1Q8N9T8 703 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 CLSTN2Q9H4D0 955 aa13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 PTPRTO14522 1441 aa13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 CT47A1Q5JQC4 288 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 EFCC1Q9HA90 598 aa13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 TMEM87AQ8NBN3 555 aa13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 DNM1Q05193 864 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 ZGPATQ8N5A5 531 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 TAF4BQ92750 862 aa13.42□□□□□ -0.26
DNMT3A-201ENST00000264709 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 NEUROD6Q96NK8 337 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 RBM28Q9NW13 759 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 SPTLC3Q9NUV7 552 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 RIMS2Q9UQ26 1411 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 STK3Q13188 491 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 EFCAB8A8MWE9 144 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 GBP6Q6ZN66 633 aa13.41□□□□□ -0.26
DNMT3A-201ENST00000264709 ABCC4O15439 1325 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 FKBP15Q5T1M5 1219 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 CHMLP26374 656 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 HYPKQ9NX55 129 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 FAM76AQ8TAV0 307 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 ATP10BO94823 1461 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 CNNM3Q8NE01 707 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 ZNF830Q96NB3 372 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 SYKP43405 635 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 TRIM14Q14142 442 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 MCM6Q14566 821 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 SMC1AQ14683 1233 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 SAMD9LQ8IVG5 1584 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 SETD1BQ9UPS6 1966 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 ZNF518AQ6AHZ1 1483 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 STMN4Q9H169 189 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 RMND1Q9NWS8 449 aa13.4□□□□□ -0.26
DNMT3A-201ENST00000264709 PLCH2O75038 1416 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 CHMP4BP1P59074 171 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 YEATS2Q9ULM3 1422 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 KRT86O43790 486 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 SSR1P43307 286 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms