RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 SHANK3Q9BYB0 1731 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 XRCC6P12956 609 aaKnown RBP eCLIP12.66□□□□□ -0.38
COMMD9-201ENST00000263401 NMIQ13287 307 aaPredicted RBP12.66□□□□□ -0.38
COMMD9-201ENST00000263401 SLFNL1Q499Z3 407 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
COMMD9-201ENST00000263401 GAS2L3Q86XJ1 694 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 ZNF594Q96JF6 807 aaPredicted RBP12.66□□□□□ -0.38
COMMD9-201ENST00000263401 CARD10Q9BWT7 1032 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
COMMD9-201ENST00000263401 PARP4Q9UKK3 1724 aaKnown RBP12.66□□□□□ -0.38
COMMD9-201ENST00000263401 A0A0D9SFI3 127 aa12.65□□□□□ -0.38
COMMD9-201ENST00000263401 CYP2E1P05181 493 aaPredicted RBP12.65□□□□□ -0.38
COMMD9-201ENST00000263401 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
COMMD9-201ENST00000263401 GOLGA6L3A6NEY3 463 aa12.65□□□□□ -0.38
COMMD9-201ENST00000263401 NCLP19338 710 aaKnown RBP12.65□□□□□ -0.38
COMMD9-201ENST00000263401 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
COMMD9-201ENST00000263401 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
COMMD9-201ENST00000263401 CASP7P55210 303 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 KCPQ6ZWJ8 1503 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 A0A0G2JS52 829 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 LARGE1O95461 756 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 GPATCH3Q96I76 525 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 DBNDD2Q9BQY9 259 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 FSD1Q9BTV5 496 aa12.64□□□□□ -0.39
COMMD9-201ENST00000263401 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
COMMD9-201ENST00000263401 SYNE4Q8N205 404 aa12.63□□□□□ -0.39
COMMD9-201ENST00000263401 DNAJC2Q99543 621 aaKnown RBP12.63□□□□□ -0.39
COMMD9-201ENST00000263401 AK2P54819 239 aa12.63□□□□□ -0.39
COMMD9-201ENST00000263401 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
COMMD9-201ENST00000263401 DNAJC10Q8IXB1 793 aa12.63□□□□□ -0.39
COMMD9-201ENST00000263401 LAMB4A4D0S4 1761 aa12.63□□□□□ -0.39
COMMD9-201ENST00000263401 ERVV-2B6SEH9 535 aa12.63□□□□□ -0.39
COMMD9-201ENST00000263401 ANAPC15P60006 121 aa12.63□□□□□ -0.39
COMMD9-201ENST00000263401 FOXO4P98177 505 aa12.63□□□□□ -0.39
COMMD9-201ENST00000263401 PIGBQ92521 554 aa12.63□□□□□ -0.39
COMMD9-201ENST00000263401 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
COMMD9-201ENST00000263401 DDX49Q9Y6V7 483 aaKnown RBP12.63□□□□□ -0.39
COMMD9-201ENST00000263401 ABCC6O95255 1503 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
COMMD9-201ENST00000263401 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 CCDC129Q6ZRS4 1044 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 EVI5LQ96CN4 794 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
COMMD9-201ENST00000263401 TMOD3Q9NYL9 352 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
COMMD9-201ENST00000263401 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 NUCB2P80303 420 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 LRRC24Q50LG9 513 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
COMMD9-201ENST00000263401 GDPD2Q9HCC8 539 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 NSFL1CQ9UNZ2 370 aaKnown RBP12.62□□□□□ -0.39
COMMD9-201ENST00000263401 HDAC5Q9UQL6 1122 aa12.62□□□□□ -0.39
COMMD9-201ENST00000263401 PUS3Q9BZE2 481 aaKnown RBP12.61□□□□□ -0.39
COMMD9-201ENST00000263401 COPRSQ9NQ92 184 aa12.61□□□□□ -0.39
COMMD9-201ENST00000263401 LMBRD1Q9NUN5 540 aa12.61□□□□□ -0.39
COMMD9-201ENST00000263401 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
COMMD9-201ENST00000263401 KCNJ4P48050 445 aa12.61□□□□□ -0.39
COMMD9-201ENST00000263401 TIMM10P62072 90 aa12.61□□□□□ -0.39
COMMD9-201ENST00000263401 DDX46Q7L014 1031 aaKnown RBP12.61□□□□□ -0.39
COMMD9-201ENST00000263401 NEUROD6Q96NK8 337 aa12.61□□□□□ -0.39
COMMD9-201ENST00000263401 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
COMMD9-201ENST00000263401 CUL4AQ13619 759 aa12.6□□□□□ -0.39
COMMD9-201ENST00000263401 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-201ENST00000263401 RABL6Q3YEC7 729 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-201ENST00000263401 TTC14Q96N46 770 aa12.6□□□□□ -0.39
COMMD9-201ENST00000263401 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
COMMD9-201ENST00000263401 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-201ENST00000263401 CAVIN1Q6NZI2 390 aaKnown RBP12.6□□□□□ -0.39
COMMD9-201ENST00000263401 CCDC171Q6TFL3 1326 aa12.6□□□□□ -0.39
COMMD9-201ENST00000263401 H7C1W4 665 aa12.6□□□□□ -0.39
COMMD9-201ENST00000263401 GPTP24298 496 aa12.6□□□□□ -0.39
COMMD9-201ENST00000263401 FAM89AQ96GI7 184 aa12.6□□□□□ -0.39
COMMD9-201ENST00000263401 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 COL15A1P39059 1388 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 TCHHQ07283 1943 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 TJP1Q07157 1748 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 GOLGA6L22H0YM25 854 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 ATG9AQ7Z3C6 839 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 NECAB1Q8N987 351 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 SLC4A9Q96Q91 983 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
COMMD9-201ENST00000263401 CREB3L3Q68CJ9 461 aa12.58□□□□□ -0.4
COMMD9-201ENST00000263401 RUFY2Q8WXA3 655 aa12.58□□□□□ -0.4
COMMD9-201ENST00000263401 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
COMMD9-201ENST00000263401 HLFQ16534 295 aa12.58□□□□□ -0.4
COMMD9-201ENST00000263401 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
COMMD9-201ENST00000263401 CCDC83Q8IWF9 413 aa12.58□□□□□ -0.4
COMMD9-201ENST00000263401 NECTIN1Q15223 517 aa12.57□□□□□ -0.4
COMMD9-201ENST00000263401 L1TD1Q5T7N2 865 aaKnown RBP12.57□□□□□ -0.4
COMMD9-201ENST00000263401 GRPEL1Q9HAV7 217 aa12.57□□□□□ -0.4
COMMD9-201ENST00000263401 PAPPAQ13219 1627 aa12.57□□□□□ -0.4
COMMD9-201ENST00000263401 BRD1O95696 1058 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms