RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.45
TTC39A-201ENST00000262675 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.45
TTC39A-201ENST00000262675 FKBP4Q02790 459 aaKnown RBP eCLIP12.21□□□□□ -0.45
TTC39A-201ENST00000262675 LDHDQ86WU2 507 aa12.21□□□□□ -0.45
TTC39A-201ENST00000262675 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
TTC39A-201ENST00000262675 USP16Q9Y5T5 823 aa12.21□□□□□ -0.45
TTC39A-201ENST00000262675 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
TTC39A-201ENST00000262675 COL13A1Q5TAT6 717 aaPredicted RBP12.2□□□□□ -0.46
TTC39A-201ENST00000262675 CC2D2BQ6DHV5 1058 aa12.2□□□□□ -0.46
TTC39A-201ENST00000262675 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
TTC39A-201ENST00000262675 HSPA1AP0DMV8 641 aaKnown RBP12.2□□□□□ -0.46
TTC39A-201ENST00000262675 HSPA1BP0DMV9 641 aaKnown RBP12.2□□□□□ -0.46
TTC39A-201ENST00000262675 TAF7Q15545 349 aaPredicted RBP12.2□□□□□ -0.46
TTC39A-201ENST00000262675 C7orf43Q8WVR3 580 aa12.2□□□□□ -0.46
TTC39A-201ENST00000262675 PNNQ9H307 717 aaKnown RBP12.2□□□□□ -0.46
TTC39A-201ENST00000262675 RTL5Q5HYW3 569 aaPredicted RBP12.19□□□□□ -0.46
TTC39A-201ENST00000262675 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
TTC39A-201ENST00000262675 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
TTC39A-201ENST00000262675 ERVV-1B6SEH8 477 aa12.19□□□□□ -0.46
TTC39A-201ENST00000262675 KCNQ3O43525 872 aa12.19□□□□□ -0.46
TTC39A-201ENST00000262675 PNMA8AQ86V59 439 aaPredicted RBP12.19□□□□□ -0.46
TTC39A-201ENST00000262675 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
TTC39A-201ENST00000262675 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
TTC39A-201ENST00000262675 IBTKQ9P2D0 1353 aaPredicted RBP12.19□□□□□ -0.46
TTC39A-201ENST00000262675 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
TTC39A-201ENST00000262675 GTF2E1P29083 439 aaPredicted RBP12.18□□□□□ -0.46
TTC39A-201ENST00000262675 CCDC24Q8N4L8 307 aa12.18□□□□□ -0.46
TTC39A-201ENST00000262675 MCM10Q7L590 875 aa12.18□□□□□ -0.46
TTC39A-201ENST00000262675 TAF1DQ9H5J8 278 aaPredicted RBP12.18□□□□□ -0.46
TTC39A-201ENST00000262675 HACL1Q9UJ83 578 aa12.18□□□□□ -0.46
TTC39A-201ENST00000262675 PSMD1Q99460 953 aa12.17□□□□□ -0.46
TTC39A-201ENST00000262675 KDM3BQ7LBC6 1761 aa12.17□□□□□ -0.46
TTC39A-201ENST00000262675 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
TTC39A-201ENST00000262675 MAPK8IP3Q9UPT6 1336 aa12.17□□□□□ -0.46
TTC39A-201ENST00000262675 CNTNAP1P78357 1384 aa12.17□□□□□ -0.46
TTC39A-201ENST00000262675 ERBB4Q15303 1308 aa12.16□□□□□ -0.46
TTC39A-201ENST00000262675 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
TTC39A-201ENST00000262675 BCAR3O75815 825 aa12.16□□□□□ -0.46
TTC39A-201ENST00000262675 IARSP41252 1262 aaKnown RBP12.16□□□□□ -0.46
TTC39A-201ENST00000262675 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
TTC39A-201ENST00000262675 KIF6Q6ZMV9 814 aa12.16□□□□□ -0.46
TTC39A-201ENST00000262675 NBPF15Q8N660 670 aa12.16□□□□□ -0.46
TTC39A-201ENST00000262675 JDP2Q8WYK2 163 aa12.16□□□□□ -0.46
TTC39A-201ENST00000262675 TMEM88BA6NKF7 163 aa12.15□□□□□ -0.46
TTC39A-201ENST00000262675 CRY2Q49AN0 593 aa12.15□□□□□ -0.46
TTC39A-201ENST00000262675 GPC2Q8N158 579 aa12.15□□□□□ -0.46
TTC39A-201ENST00000262675 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
TTC39A-201ENST00000262675 AIDAQ96BJ3 306 aa12.15□□□□□ -0.46
TTC39A-201ENST00000262675 NUP98P52948 1817 aa12.15□□□□□ -0.46
TTC39A-201ENST00000262675 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
TTC39A-201ENST00000262675 FZD9O00144 591 aa12.15□□□□□ -0.47
TTC39A-201ENST00000262675 PRDM10Q9NQV6 1147 aa12.15□□□□□ -0.47
TTC39A-201ENST00000262675 DLG5Q8TDM6 1919 aa12.14□□□□□ -0.47
TTC39A-201ENST00000262675 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
TTC39A-201ENST00000262675 SYNE4Q8N205 404 aa12.14□□□□□ -0.47
TTC39A-201ENST00000262675 TMX4Q9H1E5 349 aaPredicted RBP12.14□□□□□ -0.47
TTC39A-201ENST00000262675 VPS33BQ9H267 617 aa12.14□□□□□ -0.47
TTC39A-201ENST00000262675 MAP3K15Q6ZN16 1313 aa12.14□□□□□ -0.47
TTC39A-201ENST00000262675 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
TTC39A-201ENST00000262675 HOXA10P31260 410 aaPredicted RBP12.13□□□□□ -0.47
TTC39A-201ENST00000262675 EPHX2P34913 555 aa12.13□□□□□ -0.47
TTC39A-201ENST00000262675 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
TTC39A-201ENST00000262675 EIF6P56537 245 aaKnown RBP12.13□□□□□ -0.47
TTC39A-201ENST00000262675 RPGRQ92834 1020 aaKnown RBP12.13□□□□□ -0.47
TTC39A-201ENST00000262675 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
TTC39A-201ENST00000262675 IL16Q14005 1332 aa12.13□□□□□ -0.47
TTC39A-201ENST00000262675 RBM17Q96I25 401 aaKnown RBP12.13□□□□□ -0.47
TTC39A-201ENST00000262675 MKRN1Q9UHC7 482 aaKnown RBP12.13□□□□□ -0.47
TTC39A-201ENST00000262675 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
TTC39A-201ENST00000262675 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
TTC39A-201ENST00000262675 C8orf34Q49A92 452 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 PARP10Q53GL7 1025 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 CRAMP1Q96RY5 1269 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
TTC39A-201ENST00000262675 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 NFE2L2Q16236 605 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 HLFQ16534 295 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 EAPPQ56P03 285 aaPredicted RBP12.12□□□□□ -0.47
TTC39A-201ENST00000262675 PPP1R42Q7Z4L9 355 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 DAXXQ9UER7 740 aaPredicted RBP12.12□□□□□ -0.47
TTC39A-201ENST00000262675 ZNF541Q9H0D2 1346 aa12.12□□□□□ -0.47
TTC39A-201ENST00000262675 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
TTC39A-201ENST00000262675 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
TTC39A-201ENST00000262675 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
TTC39A-201ENST00000262675 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
TTC39A-201ENST00000262675 SNED1Q8TER0 1413 aa12.11□□□□□ -0.47
TTC39A-201ENST00000262675 NBR1Q14596 966 aa12.11□□□□□ -0.47
TTC39A-201ENST00000262675 RASSF10A6NK89 507 aa12.1□□□□□ -0.47
TTC39A-201ENST00000262675 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
TTC39A-201ENST00000262675 CAPN15O75808 1086 aa12.1□□□□□ -0.47
TTC39A-201ENST00000262675 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
TTC39A-201ENST00000262675 SUPT20HQ8NEM7 779 aa12.1□□□□□ -0.47
TTC39A-201ENST00000262675 MAP2K1Q02750 393 aaPredicted RBP12.09□□□□□ -0.47
TTC39A-201ENST00000262675 GIGYF2Q6Y7W6 1299 aaKnown RBP12.09□□□□□ -0.47
TTC39A-201ENST00000262675 ZNF34Q8IZ26 560 aa12.09□□□□□ -0.47
TTC39A-201ENST00000262675 ABCC12Q96J65 1359 aa12.09□□□□□ -0.47
TTC39A-201ENST00000262675 LMOD3Q0VAK6 560 aa12.09□□□□□ -0.47
TTC39A-201ENST00000262675 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms