RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
CHCHD3-201ENST00000262570 ALDH1L1O75891 902 aa21.06■□□□□ 0.96
CHCHD3-201ENST00000262570 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
CHCHD3-201ENST00000262570 NYXQ9GZU5 481 aa21.06■□□□□ 0.96
CHCHD3-201ENST00000262570 GCKRQ14397 625 aa21.06■□□□□ 0.96
CHCHD3-201ENST00000262570 PRR5LQ6MZQ0 368 aa21.06■□□□□ 0.96
CHCHD3-201ENST00000262570 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.06■□□□□ 0.96
CHCHD3-201ENST00000262570 CCT4P50991 539 aaKnown RBP21.05■□□□□ 0.96
CHCHD3-201ENST00000262570 INTS3Q68E01 1043 aaKnown RBP21.05■□□□□ 0.96
CHCHD3-201ENST00000262570 DZIP1LQ8IYY4 767 aaKnown RBP21.05■□□□□ 0.96
CHCHD3-201ENST00000262570 CNBD1Q8NA66 436 aa21.05■□□□□ 0.96
CHCHD3-201ENST00000262570 TRMT112Q9UI30 125 aaKnown RBP21.05■□□□□ 0.96
CHCHD3-201ENST00000262570 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
CHCHD3-201ENST00000262570 NUTM1Q86Y26 1132 aa21.04■□□□□ 0.96
CHCHD3-201ENST00000262570 NRXN2Q9P2S2 1712 aa21.03■□□□□ 0.96
CHCHD3-201ENST00000262570 RLBP1P12271 317 aa21.03■□□□□ 0.96
CHCHD3-201ENST00000262570 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
CHCHD3-201ENST00000262570 ZBTB38Q8NAP3 1195 aaPredicted RBP21.03■□□□□ 0.96
CHCHD3-201ENST00000262570 FAM89AQ96GI7 184 aa21.03■□□□□ 0.96
CHCHD3-201ENST00000262570 SH3TC1Q8TE82 1336 aa21.02■□□□□ 0.96
CHCHD3-201ENST00000262570 NPHP1O15259 732 aa21.02■□□□□ 0.96
CHCHD3-201ENST00000262570 PCCAP05165 728 aaPredicted RBP21.02■□□□□ 0.96
CHCHD3-201ENST00000262570 MS4A1P11836 297 aa21.02■□□□□ 0.96
CHCHD3-201ENST00000262570 GTF2E1P29083 439 aaPredicted RBP21.02■□□□□ 0.96
CHCHD3-201ENST00000262570 RRP1P56182 461 aaKnown RBP21.02■□□□□ 0.96
CHCHD3-201ENST00000262570 ERFEQ4G0M1 354 aa21.02■□□□□ 0.96
CHCHD3-201ENST00000262570 AFDNP55196 1824 aaKnown RBP21.02■□□□□ 0.95
CHCHD3-201ENST00000262570 H7C1W4 665 aa21.02■□□□□ 0.95
CHCHD3-201ENST00000262570 SYNE4Q8N205 404 aa21.02■□□□□ 0.95
CHCHD3-201ENST00000262570 CCDC24Q8N4L8 307 aa21.02■□□□□ 0.95
CHCHD3-201ENST00000262570 TMEM57Q8N5G2 664 aa21.02■□□□□ 0.95
CHCHD3-201ENST00000262570 ST5P78524 1137 aa21.01■□□□□ 0.95
CHCHD3-201ENST00000262570 PDE3AQ14432 1141 aa21.01■□□□□ 0.95
CHCHD3-201ENST00000262570 SLC10A5Q5PT55 438 aa21.01■□□□□ 0.95
CHCHD3-201ENST00000262570 PANK1Q8TE04 598 aa21.01■□□□□ 0.95
CHCHD3-201ENST00000262570 RTL5Q5HYW3 569 aaPredicted RBP21■□□□□ 0.95
CHCHD3-201ENST00000262570 GRM8O00222 908 aa20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 CASP7P55210 303 aa20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 JARID2Q92833 1246 aaPredicted RBP20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 BRIP1Q9BX63 1249 aa20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 USP44Q9H0E7 712 aa20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 C9orf78Q9NZ63 289 aaPredicted RBP20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 SUPT16HQ9Y5B9 1047 aaKnown RBP20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 C10orf71Q711Q0 1435 aa20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 ABCC12Q96J65 1359 aa20.99■□□□□ 0.95
CHCHD3-201ENST00000262570 C20orf194Q5TEA3 1177 aa20.98■□□□□ 0.95
CHCHD3-201ENST00000262570 UBE3BQ7Z3V4 1068 aa20.98■□□□□ 0.95
CHCHD3-201ENST00000262570 UTYO14607 1347 aa20.98■□□□□ 0.95
CHCHD3-201ENST00000262570 CDHR2Q9BYE9 1310 aa20.98■□□□□ 0.95
CHCHD3-201ENST00000262570 IRS4O14654 1257 aaPredicted RBP20.97■□□□□ 0.95
CHCHD3-201ENST00000262570 CENPBP07199 599 aaPredicted RBP20.97■□□□□ 0.95
CHCHD3-201ENST00000262570 NBPF7P0C2Y1 421 aaPredicted RBP20.97■□□□□ 0.95
CHCHD3-201ENST00000262570 PPP1R1BQ9UD71 204 aaPredicted RBP20.97■□□□□ 0.95
CHCHD3-201ENST00000262570 CD2APQ9Y5K6 639 aa20.97■□□□□ 0.95
CHCHD3-201ENST00000262570 LRP5O75197 1615 aa20.97■□□□□ 0.95
CHCHD3-201ENST00000262570 HCLS1P14317 486 aaPredicted RBP20.97■□□□□ 0.95
CHCHD3-201ENST00000262570 N4BP2Q86UW6 1770 aaPredicted RBP20.96■□□□□ 0.95
CHCHD3-201ENST00000262570 RIC1Q4ADV7 1423 aa20.96■□□□□ 0.95
CHCHD3-201ENST00000262570 KLRG2A4D1S0 409 aaPredicted RBP20.96■□□□□ 0.95
CHCHD3-201ENST00000262570 HSP90B1P14625 803 aaKnown RBP20.95■□□□□ 0.94
CHCHD3-201ENST00000262570 ITPRIPQ8IWB1 547 aa20.95■□□□□ 0.94
CHCHD3-201ENST00000262570 PDE6BP35913 854 aa20.94■□□□□ 0.94
CHCHD3-201ENST00000262570 NLRP3Q96P20 1036 aa20.94■□□□□ 0.94
CHCHD3-201ENST00000262570 PLA2G12BQ9BX93 195 aa20.94■□□□□ 0.94
CHCHD3-201ENST00000262570 FHDC1Q9C0D6 1143 aaPredicted RBP20.94■□□□□ 0.94
CHCHD3-201ENST00000262570 TGFB2P61812 414 aa20.93■□□□□ 0.94
CHCHD3-201ENST00000262570 MVPQ14764 893 aaKnown RBP20.93■□□□□ 0.94
CHCHD3-201ENST00000262570 KLHL34Q8N239 644 aa20.93■□□□□ 0.94
CHCHD3-201ENST00000262570 MEIS3Q99687 375 aa20.93■□□□□ 0.94
CHCHD3-201ENST00000262570 COG6Q9Y2V7 657 aa20.93■□□□□ 0.94
CHCHD3-201ENST00000262570 ZBTB7BO15156 539 aaPredicted RBP20.93■□□□□ 0.94
CHCHD3-201ENST00000262570 PDE8AO60658 829 aa20.93■□□□□ 0.94
CHCHD3-201ENST00000262570 C3orf67Q6ZVT6 689 aa20.93■□□□□ 0.94
CHCHD3-201ENST00000262570 KIF13BQ9NQT8 1826 aa20.92■□□□□ 0.94
CHCHD3-201ENST00000262570 GNAI3P08754 354 aa20.92■□□□□ 0.94
CHCHD3-201ENST00000262570 CRY2Q49AN0 593 aa20.92■□□□□ 0.94
CHCHD3-201ENST00000262570 SYT17Q9BSW7 474 aa20.92■□□□□ 0.94
CHCHD3-201ENST00000262570 PDZRN3Q9UPQ7 1066 aa20.92■□□□□ 0.94
CHCHD3-201ENST00000262570 ANKRD31Q8N7Z5 1873 aa20.91■□□□□ 0.94
CHCHD3-201ENST00000262570 UBTFL1P0CB47 393 aaPredicted RBP20.91■□□□□ 0.94
CHCHD3-201ENST00000262570 KAZALD1Q96I82 304 aa20.91■□□□□ 0.94
CHCHD3-201ENST00000262570 SUCLG2Q96I99 432 aa20.91■□□□□ 0.94
CHCHD3-201ENST00000262570 DDX19BQ9UMR2 479 aa20.91■□□□□ 0.94
CHCHD3-201ENST00000262570 SRGNP10124 158 aa20.9■□□□□ 0.94
CHCHD3-201ENST00000262570 SF3B3Q15393 1217 aaKnown RBP20.9■□□□□ 0.94
CHCHD3-201ENST00000262570 TNRC6CQ9HCJ0 1690 aaKnown RBP20.9■□□□□ 0.94
CHCHD3-201ENST00000262570 DDX60Q8IY21 1712 aaKnown RBP20.89■□□□□ 0.94
CHCHD3-201ENST00000262570 H0YIN7 160 aa20.89■□□□□ 0.94
CHCHD3-201ENST00000262570 CHRNA5P30532 468 aa20.89■□□□□ 0.94
CHCHD3-201ENST00000262570 FOXO4P98177 505 aa20.89■□□□□ 0.94
CHCHD3-201ENST00000262570 EPHA10Q5JZY3 1008 aa20.89■□□□□ 0.94
CHCHD3-201ENST00000262570 C2CD5Q86YS7 1000 aa20.89■□□□□ 0.94
CHCHD3-201ENST00000262570 A0A0G2JLW4 131 aa20.89■□□□□ 0.93
CHCHD3-201ENST00000262570 DPEP1P16444 411 aa20.89■□□□□ 0.93
CHCHD3-201ENST00000262570 KCNA3P22001 575 aa20.89■□□□□ 0.93
CHCHD3-201ENST00000262570 CTSWP56202 376 aa20.89■□□□□ 0.93
CHCHD3-201ENST00000262570 NLGN2Q8NFZ4 835 aa20.89■□□□□ 0.93
CHCHD3-201ENST00000262570 TTLL11Q8NHH1 800 aa20.89■□□□□ 0.93
CHCHD3-201ENST00000262570 HDAC5Q9UQL6 1122 aa20.89■□□□□ 0.93
CHCHD3-201ENST00000262570 CSF1RP07333 972 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms