RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
SGCA-201ENST00000262018 SCNN1DP51172 638 aa17.55■□□□□ 0.4
SGCA-201ENST00000262018 CIAPIN1Q6FI81 312 aa17.55■□□□□ 0.4
SGCA-201ENST00000262018 USP50Q70EL3 339 aaPredicted RBP17.55■□□□□ 0.4
SGCA-201ENST00000262018 SAPCD2Q86UD0 394 aa17.55■□□□□ 0.4
SGCA-201ENST00000262018 CELF2O95319 508 aaKnown RBP17.54■□□□□ 0.4
SGCA-201ENST00000262018 HMOX1P09601 288 aa17.54■□□□□ 0.4
SGCA-201ENST00000262018 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
SGCA-201ENST00000262018 MTHFSDQ2M296 383 aaKnown RBP17.54■□□□□ 0.4
SGCA-201ENST00000262018 KLRG2A4D1S0 409 aaPredicted RBP17.53■□□□□ 0.4
SGCA-201ENST00000262018 ALDH1B1P30837 517 aa17.52■□□□□ 0.4
SGCA-201ENST00000262018 PSMD1Q99460 953 aa17.52■□□□□ 0.4
SGCA-201ENST00000262018 FAM177BA6PVY3 158 aa17.51■□□□□ 0.39
SGCA-201ENST00000262018 ZNF790Q6PG37 636 aa17.51■□□□□ 0.39
SGCA-201ENST00000262018 TPTE2Q6XPS3 522 aa17.51■□□□□ 0.39
SGCA-201ENST00000262018 HHIPL1Q96JK4 782 aa17.51■□□□□ 0.39
SGCA-201ENST00000262018 COL4A5P29400 1685 aa17.5■□□□□ 0.39
SGCA-201ENST00000262018 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
SGCA-201ENST00000262018 ZNF408Q9H9D4 720 aa17.5■□□□□ 0.39
SGCA-201ENST00000262018 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
SGCA-201ENST00000262018 TEFQ10587 303 aa17.49■□□□□ 0.39
SGCA-201ENST00000262018 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
SGCA-201ENST00000262018 ZIC5Q96T25 663 aa17.49■□□□□ 0.39
SGCA-201ENST00000262018 GLIS2Q9BZE0 524 aaPredicted RBP17.49■□□□□ 0.39
SGCA-201ENST00000262018 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
SGCA-201ENST00000262018 BCORQ6W2J9 1755 aa17.49■□□□□ 0.39
SGCA-201ENST00000262018 FMNL2Q96PY5 1086 aa17.48■□□□□ 0.39
SGCA-201ENST00000262018 ADARB2Q9NS39 739 aaKnown RBP17.48■□□□□ 0.39
SGCA-201ENST00000262018 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
SGCA-201ENST00000262018 NOGQ13253 232 aa17.47■□□□□ 0.39
SGCA-201ENST00000262018 NIP7Q9Y221 180 aaKnown RBP eCLIP17.47■□□□□ 0.39
SGCA-201ENST00000262018 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
SGCA-201ENST00000262018 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
SGCA-201ENST00000262018 CC2D2BQ6DHV5 1058 aa17.47■□□□□ 0.39
SGCA-201ENST00000262018 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
SGCA-201ENST00000262018 GPRC5DQ9NZD1 345 aa17.46■□□□□ 0.39
SGCA-201ENST00000262018 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
SGCA-201ENST00000262018 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
SGCA-201ENST00000262018 KCNQ3O43525 872 aa17.43■□□□□ 0.38
SGCA-201ENST00000262018 HUNKP57058 714 aa17.43■□□□□ 0.38
SGCA-201ENST00000262018 TCERG1O14776 1098 aaKnown RBP17.42■□□□□ 0.38
SGCA-201ENST00000262018 PPIP5K2O43314 1243 aa17.41■□□□□ 0.38
SGCA-201ENST00000262018 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
SGCA-201ENST00000262018 PGAP2Q9UHJ9 254 aa17.41■□□□□ 0.38
SGCA-201ENST00000262018 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
SGCA-201ENST00000262018 TRPA1O75762 1119 aa17.4■□□□□ 0.38
SGCA-201ENST00000262018 GMPSP49915 693 aaPredicted RBP17.4■□□□□ 0.38
SGCA-201ENST00000262018 CRY2Q49AN0 593 aa17.4■□□□□ 0.38
SGCA-201ENST00000262018 GRIPAP1Q4V328 841 aa17.4■□□□□ 0.38
SGCA-201ENST00000262018 CDC37L1Q7L3B6 337 aa17.4■□□□□ 0.38
SGCA-201ENST00000262018 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
SGCA-201ENST00000262018 SAGE1Q9NXZ1 904 aa17.4■□□□□ 0.38
SGCA-201ENST00000262018 PRAMEF22A3QJZ6 481 aa17.39■□□□□ 0.38
SGCA-201ENST00000262018 BTBD11A6QL63 1104 aa17.39■□□□□ 0.38
SGCA-201ENST00000262018 CXCL9Q07325 125 aa17.39■□□□□ 0.38
SGCA-201ENST00000262018 AOC3Q16853 763 aa17.39■□□□□ 0.38
SGCA-201ENST00000262018 NUTM1Q86Y26 1132 aa17.39■□□□□ 0.38
SGCA-201ENST00000262018 CFAP53Q96M91 514 aa17.39■□□□□ 0.38
SGCA-201ENST00000262018 GTF3C3Q9Y5Q9 886 aa17.39■□□□□ 0.38
SGCA-201ENST00000262018 ABCC12Q96J65 1359 aa17.39■□□□□ 0.37
SGCA-201ENST00000262018 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
SGCA-201ENST00000262018 HIRAP54198 1017 aaPredicted RBP17.38■□□□□ 0.37
SGCA-201ENST00000262018 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
SGCA-201ENST00000262018 HLFQ16534 295 aa17.38■□□□□ 0.37
SGCA-201ENST00000262018 CTU1Q7Z7A3 348 aaKnown RBP17.38■□□□□ 0.37
SGCA-201ENST00000262018 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
SGCA-201ENST00000262018 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
SGCA-201ENST00000262018 ZC3H15Q8WU90 426 aaKnown RBP17.38■□□□□ 0.37
SGCA-201ENST00000262018 PPEF1O14829 653 aaPredicted RBP17.38■□□□□ 0.37
SGCA-201ENST00000262018 RGMBQ6NW40 437 aa17.38■□□□□ 0.37
SGCA-201ENST00000262018 GCC1Q96CN9 775 aa17.38■□□□□ 0.37
SGCA-201ENST00000262018 BCL2L13Q9BXK5 485 aa17.38■□□□□ 0.37
SGCA-201ENST00000262018 RNF186Q9NXI6 227 aa17.38■□□□□ 0.37
SGCA-201ENST00000262018 FAM155AB1AL88 458 aaPredicted RBP17.37■□□□□ 0.37
SGCA-201ENST00000262018 RGL2O15211 777 aa17.37■□□□□ 0.37
SGCA-201ENST00000262018 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
SGCA-201ENST00000262018 HOXA10P31260 410 aaPredicted RBP17.37■□□□□ 0.37
SGCA-201ENST00000262018 WDR43Q15061 677 aaKnown RBP eCLIP17.37■□□□□ 0.37
SGCA-201ENST00000262018 DLK2Q6UY11 383 aa17.37■□□□□ 0.37
SGCA-201ENST00000262018 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
SGCA-201ENST00000262018 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
SGCA-201ENST00000262018 NYXQ9GZU5 481 aa17.37■□□□□ 0.37
SGCA-201ENST00000262018 ZNRF3Q9ULT6 936 aa17.37■□□□□ 0.37
SGCA-201ENST00000262018 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
SGCA-201ENST00000262018 HPS5Q9UPZ3 1129 aa17.37■□□□□ 0.37
SGCA-201ENST00000262018 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
SGCA-201ENST00000262018 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
SGCA-201ENST00000262018 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
SGCA-201ENST00000262018 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
SGCA-201ENST00000262018 CCDC102AQ96A19 550 aa17.35■□□□□ 0.37
SGCA-201ENST00000262018 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
SGCA-201ENST00000262018 TMX4Q9H1E5 349 aaPredicted RBP17.35■□□□□ 0.37
SGCA-201ENST00000262018 ZNF157P51786 506 aaPredicted RBP17.34■□□□□ 0.37
SGCA-201ENST00000262018 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
SGCA-201ENST00000262018 CDHR2Q9BYE9 1310 aa17.33■□□□□ 0.37
SGCA-201ENST00000262018 RAD17O75943 681 aa17.33■□□□□ 0.36
SGCA-201ENST00000262018 C2orf69Q8N8R5 385 aa17.33■□□□□ 0.36
SGCA-201ENST00000262018 VPS33BQ9H267 617 aa17.33■□□□□ 0.36
SGCA-201ENST00000262018 GBA2Q9HCG7 927 aaPredicted RBP17.33■□□□□ 0.36
SGCA-201ENST00000262018 SHTN1A0MZ66 631 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms