RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 B4GALNT4Q76KP1 1039 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 EXOC6BQ9Y2D4 811 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 SYT1P21579 422 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 LACTBP83111 547 aaPredicted RBP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 MYRIPQ8NFW9 859 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 STMN4Q9H169 189 aaPredicted RBP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 AFAP1L1Q8TED9 768 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 RUSC2Q8N2Y8 1516 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 BUB1BO60566 1050 aaPredicted RBP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 INPP5BP32019 993 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 CCDC96Q2M329 555 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 PIBF1Q8WXW3 757 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 NOL3O60936 208 aaKnown RBP12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 LMNTD2Q8IXW0 634 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 COMMD10Q9Y6G5 202 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 TERF1P54274 439 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 ST5P78524 1137 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 ZNF408Q9H9D4 720 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 MACROD2A1Z1Q3 448 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 RHOXF2BP0C7M4 288 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 RFC4P35249 363 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 GPR162Q16538 588 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 FEZ2Q9UHY8 353 aaPredicted RBP12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 CCDC50Q8IVM0 306 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 TTC14Q96N46 770 aa12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
SLC6A4-201ENST00000261707 C6orf229H3BNL8 230 aa12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 RARSP54136 660 aaKnown RBP12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 KIAA0753Q2KHM9 967 aa12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 ATP11AP98196 1134 aa12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 PUS7Q96PZ0 661 aaKnown RBP12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 SAMD15Q9P1V8 674 aa12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 HMGB1P09429 215 aaKnown RBP12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 DNAJC25Q9H1X3 360 aa12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 IFI16Q16666 785 aaKnown RBP12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 AOPEPQ8N6M6 819 aa12.29□□□□□ -0.44
SLC6A4-201ENST00000261707 GLRX3O76003 335 aaKnown RBP12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 BMP2KLQ5H9B9 411 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 DDX23Q9BUQ8 820 aaKnown RBP12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 MRPS9P82933 396 aaKnown RBP12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 PPFIBP2Q8ND30 876 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 PPP1R14CQ8TAE6 165 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 KIF3CO14782 793 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 LPXNO60711 386 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 PCK1P35558 622 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 CYLC1P35663 651 aaPredicted RBP12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 TMX3Q96JJ7 454 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 IGHDP01880 384 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 RAB3GAP1Q15042 981 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 TAF12Q16514 161 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 FMNL3Q8IVF7 1028 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 KIF1BPQ96EK5 621 aa12.28□□□□□ -0.44
SLC6A4-201ENST00000261707 DDX12PQ92771 950 aa12.27□□□□□ -0.44
SLC6A4-201ENST00000261707 STIM2Q9P246 746 aa12.27□□□□□ -0.44
SLC6A4-201ENST00000261707 LRP2BPQ9P2M1 347 aa12.27□□□□□ -0.44
SLC6A4-201ENST00000261707 ARFGAP2Q8N6H7 521 aa12.27□□□□□ -0.44
SLC6A4-201ENST00000261707 CTAGE1Q96RT6 745 aa12.27□□□□□ -0.44
SLC6A4-201ENST00000261707 GOLIM4O00461 696 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 N4BP3O15049 544 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 FERP16591 822 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 CUL5Q93034 780 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 CAPZA3Q96KX2 299 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 KANK3Q6NY19 840 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 ANKRD30BQ9BXX2 1392 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 CTNNA2P26232 953 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 EVCP57679 992 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 SNX21Q969T3 373 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 EHMT1Q9H9B1 1298 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 RASAL2Q9UJF2 1139 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 LUC7L2Q9Y383 392 aaKnown RBP12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 BIRC2Q13490 618 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
SLC6A4-201ENST00000261707 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
SLC6A4-201ENST00000261707 IKBKGQ9Y6K9 419 aa12.26□□□□□ -0.45
SLC6A4-201ENST00000261707 TUBBP07437 444 aa12.26□□□□□ -0.45
SLC6A4-201ENST00000261707 CCT2P78371 535 aaKnown RBP12.26□□□□□ -0.45
SLC6A4-201ENST00000261707 CAVIN4Q5BKX8 364 aa12.26□□□□□ -0.45
SLC6A4-201ENST00000261707 SELENOOQ9BVL4 669 aa12.26□□□□□ -0.45
SLC6A4-201ENST00000261707 HDAC9Q9UKV0 1011 aa12.26□□□□□ -0.45
SLC6A4-201ENST00000261707 PPP2R3AQ06190 1150 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms