RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
GYPC-201ENST00000259254 USP42Q9H9J4 1324 aaKnown RBP19.61■□□□□ 0.73
GYPC-201ENST00000259254 GNAI3P08754 354 aa19.61■□□□□ 0.73
GYPC-201ENST00000259254 GCKRQ14397 625 aa19.61■□□□□ 0.73
GYPC-201ENST00000259254 ISCA1Q9BUE6 129 aa19.61■□□□□ 0.73
GYPC-201ENST00000259254 UBTFL1P0CB47 393 aaPredicted RBP19.6■□□□□ 0.73
GYPC-201ENST00000259254 AAMPQ13685 434 aa19.6■□□□□ 0.73
GYPC-201ENST00000259254 CLEC4GQ6UXB4 293 aa19.6■□□□□ 0.73
GYPC-201ENST00000259254 CCDC191Q8NCU4 936 aa19.6■□□□□ 0.73
GYPC-201ENST00000259254 GRM8O00222 908 aa19.59■□□□□ 0.73
GYPC-201ENST00000259254 RGL2O15211 777 aa19.59■□□□□ 0.73
GYPC-201ENST00000259254 YY1P25490 414 aa19.59■□□□□ 0.73
GYPC-201ENST00000259254 BICDL1Q6ZP65 573 aa19.59■□□□□ 0.73
GYPC-201ENST00000259254 USP44Q9H0E7 712 aa19.59■□□□□ 0.73
GYPC-201ENST00000259254 C1orf115Q9H7X2 142 aa19.59■□□□□ 0.73
GYPC-201ENST00000259254 ZBTB40Q9NUA8 1239 aa19.59■□□□□ 0.73
GYPC-201ENST00000259254 NIP7Q9Y221 180 aaKnown RBP eCLIP19.59■□□□□ 0.73
GYPC-201ENST00000259254 ARFGEF2Q9Y6D5 1785 aa19.58■□□□□ 0.73
GYPC-201ENST00000259254 NLRP10Q86W26 655 aa19.58■□□□□ 0.72
GYPC-201ENST00000259254 BCL2L12Q9HB09 334 aa19.58■□□□□ 0.72
GYPC-201ENST00000259254 FAM177BA6PVY3 158 aa19.57■□□□□ 0.72
GYPC-201ENST00000259254 GNAI2P04899 355 aa19.57■□□□□ 0.72
GYPC-201ENST00000259254 TRIM28Q13263 835 aaKnown RBP19.57■□□□□ 0.72
GYPC-201ENST00000259254 PARP10Q53GL7 1025 aa19.57■□□□□ 0.72
GYPC-201ENST00000259254 ZNF34Q8IZ26 560 aa19.57■□□□□ 0.72
GYPC-201ENST00000259254 NLGN2Q8NFZ4 835 aa19.57■□□□□ 0.72
GYPC-201ENST00000259254 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
GYPC-201ENST00000259254 NBPF7P0C2Y1 421 aaPredicted RBP19.56■□□□□ 0.72
GYPC-201ENST00000259254 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
GYPC-201ENST00000259254 TBC1D9BQ66K14 1250 aa19.56■□□□□ 0.72
GYPC-201ENST00000259254 UBE3BQ7Z3V4 1068 aa19.56■□□□□ 0.72
GYPC-201ENST00000259254 JARID2Q92833 1246 aaPredicted RBP19.56■□□□□ 0.72
GYPC-201ENST00000259254 HDAC5Q9UQL6 1122 aa19.56■□□□□ 0.72
GYPC-201ENST00000259254 UBN2Q6ZU65 1347 aa19.55■□□□□ 0.72
GYPC-201ENST00000259254 GYS1P13807 737 aa19.55■□□□□ 0.72
GYPC-201ENST00000259254 SETDB2Q96T68 719 aa19.55■□□□□ 0.72
GYPC-201ENST00000259254 TRMT112Q9UI30 125 aaKnown RBP19.55■□□□□ 0.72
GYPC-201ENST00000259254 LRRFIP2Q9Y608 721 aaKnown RBP19.55■□□□□ 0.72
GYPC-201ENST00000259254 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
GYPC-201ENST00000259254 CCDC136Q96JN2 1154 aa19.54■□□□□ 0.72
GYPC-201ENST00000259254 UTP14AQ9BVJ6 771 aaKnown RBP19.54■□□□□ 0.72
GYPC-201ENST00000259254 CD2APQ9Y5K6 639 aa19.54■□□□□ 0.72
GYPC-201ENST00000259254 IBTKQ9P2D0 1353 aaPredicted RBP19.54■□□□□ 0.72
GYPC-201ENST00000259254 SCN7AQ01118 1682 aa19.53■□□□□ 0.72
GYPC-201ENST00000259254 GPR162Q16538 588 aa19.53■□□□□ 0.72
GYPC-201ENST00000259254 SUSD4Q5VX71 490 aa19.53■□□□□ 0.72
GYPC-201ENST00000259254 KIF13BQ9NQT8 1826 aa19.53■□□□□ 0.72
GYPC-201ENST00000259254 UTYO14607 1347 aa19.52■□□□□ 0.72
GYPC-201ENST00000259254 H7C1W4 665 aa19.52■□□□□ 0.72
GYPC-201ENST00000259254 PCCAP05165 728 aaPredicted RBP19.52■□□□□ 0.72
GYPC-201ENST00000259254 ZBTB38Q8NAP3 1195 aaPredicted RBP19.52■□□□□ 0.72
GYPC-201ENST00000259254 FAM89AQ96GI7 184 aa19.52■□□□□ 0.72
GYPC-201ENST00000259254 SUCLG2Q96I99 432 aa19.52■□□□□ 0.72
GYPC-201ENST00000259254 PCDHB15Q9Y5E8 787 aa19.52■□□□□ 0.72
GYPC-201ENST00000259254 UTRNP46939 3433 aa19.51■□□□□ 0.71
GYPC-201ENST00000259254 NPHP1O15259 732 aa19.51■□□□□ 0.71
GYPC-201ENST00000259254 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
GYPC-201ENST00000259254 NFIXQ14938 502 aa19.51■□□□□ 0.71
GYPC-201ENST00000259254 NLGN1Q8N2Q7 840 aa19.51■□□□□ 0.71
GYPC-201ENST00000259254 BCORQ6W2J9 1755 aa19.51■□□□□ 0.71
GYPC-201ENST00000259254 N4BP2Q86UW6 1770 aaPredicted RBP19.5■□□□□ 0.71
GYPC-201ENST00000259254 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
GYPC-201ENST00000259254 NBPF5PQ86XG9 351 aaPredicted RBP19.5■□□□□ 0.71
GYPC-201ENST00000259254 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
GYPC-201ENST00000259254 SH3TC1Q8TE82 1336 aa19.5■□□□□ 0.71
GYPC-201ENST00000259254 CARMIL3Q8ND23 1372 aa19.49■□□□□ 0.71
GYPC-201ENST00000259254 NTSR2O95665 410 aa19.49■□□□□ 0.71
GYPC-201ENST00000259254 NYXQ9GZU5 481 aa19.49■□□□□ 0.71
GYPC-201ENST00000259254 KIAA1551Q9HCM1 1747 aa19.48■□□□□ 0.71
GYPC-201ENST00000259254 IRS4O14654 1257 aaPredicted RBP19.48■□□□□ 0.71
GYPC-201ENST00000259254 MMP10P09238 476 aa19.48■□□□□ 0.71
GYPC-201ENST00000259254 CASP7P55210 303 aa19.48■□□□□ 0.71
GYPC-201ENST00000259254 CEP85Q6P2H3 762 aa19.48■□□□□ 0.71
GYPC-201ENST00000259254 NUTM1Q86Y26 1132 aa19.48■□□□□ 0.71
GYPC-201ENST00000259254 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
GYPC-201ENST00000259254 BICC1Q9H694 974 aaKnown RBP19.48■□□□□ 0.71
GYPC-201ENST00000259254 TPTE2Q6XPS3 522 aa19.47■□□□□ 0.71
GYPC-201ENST00000259254 SYNE4Q8N205 404 aa19.47■□□□□ 0.71
GYPC-201ENST00000259254 ANKRD44Q8N8A2 993 aa19.47■□□□□ 0.71
GYPC-201ENST00000259254 RWDD1Q9H446 243 aaPredicted RBP19.47■□□□□ 0.71
GYPC-201ENST00000259254 CDHR2Q9BYE9 1310 aa19.47■□□□□ 0.71
GYPC-201ENST00000259254 HMMRO75330 724 aa19.46■□□□□ 0.71
GYPC-201ENST00000259254 HSP90B1P14625 803 aaKnown RBP19.46■□□□□ 0.71
GYPC-201ENST00000259254 YBX3P16989 372 aaKnown RBP eCLIP19.46■□□□□ 0.716e-12■■□□□ 12.7
GYPC-201ENST00000259254 ERFEQ4G0M1 354 aa19.46■□□□□ 0.71
GYPC-201ENST00000259254 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
GYPC-201ENST00000259254 ANKRD36CQ5JPF3 1778 aa19.45■□□□□ 0.7
GYPC-201ENST00000259254 SERPINB2P05120 415 aa19.45■□□□□ 0.7
GYPC-201ENST00000259254 HCLS1P14317 486 aaPredicted RBP19.45■□□□□ 0.7
GYPC-201ENST00000259254 TM4SF1P30408 202 aa19.45■□□□□ 0.7
GYPC-201ENST00000259254 EPHA10Q5JZY3 1008 aa19.45■□□□□ 0.7
GYPC-201ENST00000259254 CNBD1Q8NA66 436 aa19.45■□□□□ 0.7
GYPC-201ENST00000259254 KAZALD1Q96I82 304 aa19.45■□□□□ 0.7
GYPC-201ENST00000259254 NUP98P52948 1817 aa19.45■□□□□ 0.7
GYPC-201ENST00000259254 AFDNP55196 1824 aaKnown RBP19.45■□□□□ 0.7
GYPC-201ENST00000259254 SRGAP3O43295 1099 aa19.44■□□□□ 0.7
GYPC-201ENST00000259254 ATP8B2P98198 1209 aa19.44■□□□□ 0.7
GYPC-201ENST00000259254 DDR1Q08345 913 aa19.44■□□□□ 0.7
GYPC-201ENST00000259254 LMBR1LQ6UX01 489 aa19.44■□□□□ 0.7
GYPC-201ENST00000259254 PARP3Q9Y6F1 533 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms