RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ZNF330Q9Y3S2 320 aaPredicted RBP34.01■■■■□ 3.03
CCM2-201ENST00000258781 ERC1Q8IUD2 1116 aa34■■■■□ 3.03
CCM2-201ENST00000258781 IL1RAPL2Q9NP60 686 aa34■■■■□ 3.03
CCM2-201ENST00000258781 CRKLP46109 303 aaKnown RBP33.97■■■■□ 3.03
CCM2-201ENST00000258781 INTS5Q6P9B9 1019 aaKnown RBP33.97■■■■□ 3.03
CCM2-201ENST00000258781 OS9Q13438 667 aaPredicted RBP33.97■■■■□ 3.03
CCM2-201ENST00000258781 TAF1LQ8IZX4 1826 aa33.96■■■■□ 3.03
CCM2-201ENST00000258781 TRIM37O94972 964 aa33.95■■■■□ 3.02
CCM2-201ENST00000258781 LINC00116Q8NCU8 138 aa33.95■■■■□ 3.02
CCM2-201ENST00000258781 ZBTB3Q9H5J0 574 aa33.95■■■■□ 3.02
CCM2-201ENST00000258781 CCDC87Q9NVE4 849 aa33.95■■■■□ 3.02
CCM2-201ENST00000258781 ATP5J2-PTCD1G3V325 749 aa33.94■■■■□ 3.02
CCM2-201ENST00000258781 AK9Q5TCS8 1911 aa33.93■■■■□ 3.02
CCM2-201ENST00000258781 USP42Q9H9J4 1324 aaKnown RBP33.93■■■■□ 3.02
CCM2-201ENST00000258781 TSHZ3Q63HK5 1081 aa33.93■■■■□ 3.02
CCM2-201ENST00000258781 A0A087WZG4 1122 aa33.92■■■■□ 3.02
CCM2-201ENST00000258781 IL6STP40189 918 aaPredicted RBP33.92■■■■□ 3.02
CCM2-201ENST00000258781 CASP7P55210 303 aa33.92■■■■□ 3.02
CCM2-201ENST00000258781 NUTM1Q86Y26 1132 aa33.92■■■■□ 3.02
CCM2-201ENST00000258781 RABL6Q3YEC7 729 aaPredicted RBP33.91■■■■□ 3.02
CCM2-201ENST00000258781 UBE3BQ7Z3V4 1068 aa33.91■■■■□ 3.02
CCM2-201ENST00000258781 PA2G4Q9UQ80 394 aaKnown RBP33.91■■■■□ 3.02
CCM2-201ENST00000258781 EPHA10Q5JZY3 1008 aa33.9■■■■□ 3.02
CCM2-201ENST00000258781 CLASRPQ8N2M8 674 aaKnown RBP33.9■■■■□ 3.02
CCM2-201ENST00000258781 TBC1D2Q9BYX2 928 aa33.9■■■■□ 3.02
CCM2-201ENST00000258781 CWC25Q9NXE8 425 aaPredicted RBP33.9■■■■□ 3.02
CCM2-201ENST00000258781 CCNL1Q9UK58 526 aaPredicted RBP33.9■■■■□ 3.02
CCM2-201ENST00000258781 H7C1W4 665 aa33.88■■■■□ 3.01
CCM2-201ENST00000258781 EIF5P55010 431 aaKnown RBP33.88■■■■□ 3.01
CCM2-201ENST00000258781 G3BP1Q13283 466 aaKnown RBP eCLIP33.88■■■■□ 3.01
CCM2-201ENST00000258781 CCDC191Q8NCU4 936 aa33.88■■■■□ 3.01
CCM2-201ENST00000258781 TTC41PQ6P2S7 1318 aa33.88■■■■□ 3.01
CCM2-201ENST00000258781 PI4K2BQ8TCG2 481 aa33.87■■■■□ 3.01
CCM2-201ENST00000258781 KIF6Q6ZMV9 814 aa33.86■■■■□ 3.01
CCM2-201ENST00000258781 NUP98P52948 1817 aa33.86■■■■□ 3.01
CCM2-201ENST00000258781 REC8O95072 547 aa33.86■■■■□ 3.01
CCM2-201ENST00000258781 ARXQ96QS3 562 aa33.86■■■■□ 3.01
CCM2-201ENST00000258781 MAP3K15Q6ZN16 1313 aa33.86■■■■□ 3.01
CCM2-201ENST00000258781 ERC2O15083 957 aa33.85■■■■□ 3.01
CCM2-201ENST00000258781 COPRSQ9NQ92 184 aa33.85■■■■□ 3.01
CCM2-201ENST00000258781 USP26Q9BXU7 913 aa33.84■■■■□ 3.01
CCM2-201ENST00000258781 CNTNAP4Q9C0A0 1308 aa33.84■■■■□ 3.01
CCM2-201ENST00000258781 TRIM6-TRIM34B2RNG4 842 aa33.84■■■■□ 3.01
CCM2-201ENST00000258781 KIF2CQ99661 725 aa33.84■■■■□ 3.01
CCM2-201ENST00000258781 ANKRD36CQ5JPF3 1778 aa33.84■■■■□ 3.01
CCM2-201ENST00000258781 ISCA1Q9BUE6 129 aa33.83■■■■□ 3.01
CCM2-201ENST00000258781 TBC1D2BQ9UPU7 963 aa33.83■■■■□ 3.01
CCM2-201ENST00000258781 SASH1O94885 1247 aa33.82■■■■□ 3.01
CCM2-201ENST00000258781 RFX5P48382 616 aaPredicted RBP33.82■■■■□ 3.01
CCM2-201ENST00000258781 DZIP3Q86Y13 1208 aaKnown RBP33.82■■■■□ 3.01
CCM2-201ENST00000258781 JARID2Q92833 1246 aaPredicted RBP33.82■■■■□ 3.01
CCM2-201ENST00000258781 SNX21Q969T3 373 aa33.82■■■■□ 3.01
CCM2-201ENST00000258781 LRRC4BQ9NT99 713 aa33.82■■■■□ 3.01
CCM2-201ENST00000258781 C4BP0C0L5 1744 aa33.82■■■■□ 3
CCM2-201ENST00000258781 TCIRG1Q13488 830 aa33.82■■■■□ 3
CCM2-201ENST00000258781 HLFQ16534 295 aa33.82■■■■□ 3
CCM2-201ENST00000258781 RILPL2Q969X0 211 aa33.82■■■■□ 3
CCM2-201ENST00000258781 GPATCH3Q96I76 525 aa33.82■■■■□ 3
CCM2-201ENST00000258781 TRIM28Q13263 835 aaKnown RBP33.81■■■■□ 3
CCM2-201ENST00000258781 TNS1Q9HBL0 1735 aaKnown RBP33.81■■■■□ 3
CCM2-201ENST00000258781 GLRX3O76003 335 aaKnown RBP33.8■■■■□ 3
CCM2-201ENST00000258781 IFIT2P09913 472 aaKnown RBP33.8■■■■□ 3
CCM2-201ENST00000258781 CHMLP26374 656 aa33.8■■■■□ 3
CCM2-201ENST00000258781 FOXO4P98177 505 aa33.78■■■■□ 3
CCM2-201ENST00000258781 GIGYF2Q6Y7W6 1299 aaKnown RBP33.78■■■■□ 3
CCM2-201ENST00000258781 HSCBQ8IWL3 235 aa33.78■■■■□ 3
CCM2-201ENST00000258781 ESYT1Q9BSJ8 1104 aa33.78■■■■□ 3
CCM2-201ENST00000258781 ECHDC1Q9NTX5 307 aa33.78■■■■□ 3
CCM2-201ENST00000258781 BCORQ6W2J9 1755 aa33.78■■■■□ 3
CCM2-201ENST00000258781 PTPN12Q05209 780 aaKnown RBP33.78■■■■□ 3
CCM2-201ENST00000258781 ILDR1Q86SU0 546 aaPredicted RBP33.78■■■■□ 3
CCM2-201ENST00000258781 SMIM5Q71RC9 77 aa33.77■■■■□ 3
CCM2-201ENST00000258781 AACSQ86V21 672 aa33.77■■■■□ 3
CCM2-201ENST00000258781 RC3H1Q5TC82 1133 aaKnown RBP33.76■■■■□ 3
CCM2-201ENST00000258781 SIL1Q9H173 461 aa33.76■■■■□ 3
CCM2-201ENST00000258781 CNTROBQ8N137 903 aa33.76■■■□□ 2.99
CCM2-201ENST00000258781 LMBR1LQ6UX01 489 aa33.75■■■□□ 2.99
CCM2-201ENST00000258781 KLHDC4Q8TBB5 520 aa33.75■■■□□ 2.99
CCM2-201ENST00000258781 ERVV-1B6SEH8 477 aa33.74■■■□□ 2.99
CCM2-201ENST00000258781 AMIGO3Q86WK7 504 aa33.74■■■□□ 2.99
CCM2-201ENST00000258781 GNPATO15228 680 aa33.73■■■□□ 2.99
CCM2-201ENST00000258781 CAMTA2O94983 1202 aa33.73■■■□□ 2.99
CCM2-201ENST00000258781 PROM2Q8N271 834 aa33.73■■■□□ 2.99
CCM2-201ENST00000258781 EAF2Q96CJ1 260 aaPredicted RBP33.73■■■□□ 2.99
CCM2-201ENST00000258781 HSP90AB3PQ58FF7 597 aa33.72■■■□□ 2.99
CCM2-201ENST00000258781 RPS6KA4O75676 772 aa33.71■■■□□ 2.99
CCM2-201ENST00000258781 RABEP1Q15276 862 aa33.71■■■□□ 2.99
CCM2-201ENST00000258781 SLC27A3Q5K4L6 730 aa33.71■■■□□ 2.99
CCM2-201ENST00000258781 SCN7AQ01118 1682 aa33.7■■■□□ 2.99
CCM2-201ENST00000258781 APBA3O96018 575 aa33.7■■■□□ 2.99
CCM2-201ENST00000258781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.7■■■□□ 2.99
CCM2-201ENST00000258781 C4AP0C0L4 1744 aa33.7■■■□□ 2.99
CCM2-201ENST00000258781 UBR3Q6ZT12 1888 aa33.7■■■□□ 2.99
CCM2-201ENST00000258781 EPB41L2O43491 1005 aaKnown RBP33.69■■■□□ 2.98
CCM2-201ENST00000258781 PCCAP05165 728 aaPredicted RBP33.69■■■□□ 2.98
CCM2-201ENST00000258781 GPTP24298 496 aa33.69■■■□□ 2.98
CCM2-201ENST00000258781 TXNRD1Q16881 649 aa33.69■■■□□ 2.98
CCM2-201ENST00000258781 NBR1Q14596 966 aa33.69■■■□□ 2.98
CCM2-201ENST00000258781 RTL5Q5HYW3 569 aaPredicted RBP33.68■■■□□ 2.98
CCM2-201ENST00000258781 PLSCR1O15162 318 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms