RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 LARGE1O95461 756 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 ZNF589Q86UQ0 364 aaPredicted RBP10.97□□□□□ -0.65
CKAP2-201ENST00000258607 SSH3Q8TE77 659 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
CKAP2-201ENST00000258607 USP32Q8NFA0 1604 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 IDH1O75874 414 aaKnown RBP10.97□□□□□ -0.65
CKAP2-201ENST00000258607 RBM25P49756 843 aaKnown RBP10.97□□□□□ -0.65
CKAP2-201ENST00000258607 PDIA6Q15084 440 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 PTF1AQ7RTS3 328 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 CCDC144CPQ8IYA2 1237 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 MEGF6O75095 1541 aa10.97□□□□□ -0.65
CKAP2-201ENST00000258607 PIK3C2AO00443 1686 aa10.96□□□□□ -0.65
CKAP2-201ENST00000258607 HTATSF1O43719 755 aaKnown RBP10.96□□□□□ -0.65
CKAP2-201ENST00000258607 RXRAP19793 462 aa10.96□□□□□ -0.65
CKAP2-201ENST00000258607 CCDC57Q2TAC2 916 aa10.96□□□□□ -0.65
CKAP2-201ENST00000258607 PIGBQ92521 554 aa10.96□□□□□ -0.65
CKAP2-201ENST00000258607 TFIP11Q9UBB9 837 aaKnown RBP10.96□□□□□ -0.65
CKAP2-201ENST00000258607 NSFL1CQ9UNZ2 370 aaKnown RBP10.96□□□□□ -0.65
CKAP2-201ENST00000258607 ZBTB1Q9Y2K1 713 aa10.96□□□□□ -0.65
CKAP2-201ENST00000258607 EXOC5O00471 708 aa10.96□□□□□ -0.66
CKAP2-201ENST00000258607 RAB11FIP3O75154 756 aa10.96□□□□□ -0.66
CKAP2-201ENST00000258607 ADORA1P30542 326 aa10.96□□□□□ -0.66
CKAP2-201ENST00000258607 AK2P54819 239 aa10.96□□□□□ -0.66
CKAP2-201ENST00000258607 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.66
CKAP2-201ENST00000258607 NRKQ7Z2Y5 1582 aa10.95□□□□□ -0.66
CKAP2-201ENST00000258607 SETD1AO15047 1707 aaKnown RBP10.95□□□□□ -0.66
CKAP2-201ENST00000258607 SYCE3A1L190 88 aa10.95□□□□□ -0.66
CKAP2-201ENST00000258607 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
CKAP2-201ENST00000258607 PIBF1Q8WXW3 757 aa10.95□□□□□ -0.66
CKAP2-201ENST00000258607 DBNLQ9UJU6 430 aaKnown RBP10.95□□□□□ -0.66
CKAP2-201ENST00000258607 IBTKQ9P2D0 1353 aaPredicted RBP10.95□□□□□ -0.66
CKAP2-201ENST00000258607 WTIPA6NIX2 430 aaPredicted RBP10.95□□□□□ -0.66
CKAP2-201ENST00000258607 UBAP1LF5GYI3 381 aa10.95□□□□□ -0.66
CKAP2-201ENST00000258607 BAG4O95429 457 aaKnown RBP10.95□□□□□ -0.66
CKAP2-201ENST00000258607 RRP12Q5JTH9 1297 aaKnown RBP10.95□□□□□ -0.66
CKAP2-201ENST00000258607 VPS53Q5VIR6 699 aa10.95□□□□□ -0.66
CKAP2-201ENST00000258607 GAS2L3Q86XJ1 694 aa10.95□□□□□ -0.66
CKAP2-201ENST00000258607 RBM8AQ9Y5S9 174 aaKnown RBP10.95□□□□□ -0.66
CKAP2-201ENST00000258607 ARHGAP23Q9P227 1491 aa10.95□□□□□ -0.66
CKAP2-201ENST00000258607 GLRX3O76003 335 aaKnown RBP10.94□□□□□ -0.66
CKAP2-201ENST00000258607 RGPD2P0DJD1 1756 aa10.94□□□□□ -0.66
CKAP2-201ENST00000258607 PI4K2BQ8TCG2 481 aa10.94□□□□□ -0.66
CKAP2-201ENST00000258607 METTL22Q9BUU2 404 aaPredicted RBP10.94□□□□□ -0.66
CKAP2-201ENST00000258607 ATP6V1AP38606 617 aa10.94□□□□□ -0.66
CKAP2-201ENST00000258607 METTL24Q5JXM2 366 aa10.94□□□□□ -0.66
CKAP2-201ENST00000258607 LDHAL6AQ6ZMR3 332 aa10.94□□□□□ -0.66
CKAP2-201ENST00000258607 KIF6Q6ZMV9 814 aa10.94□□□□□ -0.66
CKAP2-201ENST00000258607 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
CKAP2-201ENST00000258607 SMC3Q9UQE7 1217 aa10.94□□□□□ -0.66
CKAP2-201ENST00000258607 ZKSCAN1P17029 563 aaPredicted RBP10.93□□□□□ -0.66
CKAP2-201ENST00000258607 GPHNQ9NQX3 736 aaPredicted RBP10.93□□□□□ -0.66
CKAP2-201ENST00000258607 ABCF2Q9UG63 623 aa10.93□□□□□ -0.66
CKAP2-201ENST00000258607 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
CKAP2-201ENST00000258607 XRCC6P12956 609 aaKnown RBP eCLIP10.93□□□□□ -0.66
CKAP2-201ENST00000258607 CAMK4Q16566 473 aa10.93□□□□□ -0.66
CKAP2-201ENST00000258607 TRIM44Q96DX7 344 aaPredicted RBP10.93□□□□□ -0.66
CKAP2-201ENST00000258607 NCOA5Q9HCD5 579 aaKnown RBP10.93□□□□□ -0.66
CKAP2-201ENST00000258607 PDRG1Q9NUG6 133 aa10.93□□□□□ -0.66
CKAP2-201ENST00000258607 SLIT1O75093 1534 aa10.92□□□□□ -0.66
CKAP2-201ENST00000258607 GADD45BO75293 160 aaPredicted RBP10.92□□□□□ -0.66
CKAP2-201ENST00000258607 IFIT1P09914 478 aaKnown RBP10.92□□□□□ -0.66
CKAP2-201ENST00000258607 SLC51AQ86UW1 340 aa10.92□□□□□ -0.66
CKAP2-201ENST00000258607 CEP126Q9P2H0 1117 aa10.92□□□□□ -0.66
CKAP2-201ENST00000258607 SNX14Q9Y5W7 946 aa10.92□□□□□ -0.66
CKAP2-201ENST00000258607 ATP2B1P20020 1258 aa10.92□□□□□ -0.66
CKAP2-201ENST00000258607 INCENPQ9NQS7 918 aa10.92□□□□□ -0.66
CKAP2-201ENST00000258607 CNPY2Q9Y2B0 182 aa10.92□□□□□ -0.66
CKAP2-201ENST00000258607 ANKARQ7Z5J8 1434 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 A0A087WWV3 80 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 HSP90AB4PQ58FF6 505 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 MEX3CQ5U5Q3 659 aaKnown RBP10.91□□□□□ -0.66
CKAP2-201ENST00000258607 DDB1Q16531 1140 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 TTC39AQ5SRH9 613 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 OTUD7BQ6GQQ9 843 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 SEC31BQ9NQW1 1179 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 WDR17Q8IZU2 1322 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 A0A1B0GUL7 405 aa10.91□□□□□ -0.66
CKAP2-201ENST00000258607 PTPN12Q05209 780 aaKnown RBP10.91□□□□□ -0.66
CKAP2-201ENST00000258607 KDM6AO15550 1401 aaPredicted RBP10.9□□□□□ -0.66
CKAP2-201ENST00000258607 SGSM2O43147 1006 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 TNNI3KQ59H18 835 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 ERCC4Q92889 916 aaPredicted RBP10.9□□□□□ -0.66
CKAP2-201ENST00000258607 GREM2Q9H772 168 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
CKAP2-201ENST00000258607 FPGT-TNNI3KV9GXZ4 949 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 REREQ9P2R6 1566 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 CEMIPQ8WUJ3 1361 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 DDX11L8A8MPP1 907 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 PTMAP06454 111 aaKnown RBP10.9□□□□□ -0.66
CKAP2-201ENST00000258607 SCARF1Q14162 830 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 DZIP3Q86Y13 1208 aaKnown RBP10.9□□□□□ -0.66
CKAP2-201ENST00000258607 BRF1Q92994 677 aa10.9□□□□□ -0.66
CKAP2-201ENST00000258607 KNDC1Q76NI1 1749 aa10.9□□□□□ -0.67
CKAP2-201ENST00000258607 NALCNQ8IZF0 1738 aa10.9□□□□□ -0.67
CKAP2-201ENST00000258607 JAK2O60674 1132 aa10.9□□□□□ -0.67
CKAP2-201ENST00000258607 IFIT5Q13325 482 aaKnown RBP10.9□□□□□ -0.67
CKAP2-201ENST00000258607 MIGA1Q8NAN2 632 aa10.9□□□□□ -0.67
CKAP2-201ENST00000258607 GJB4Q9NTQ9 266 aa10.9□□□□□ -0.67
CKAP2-201ENST00000258607 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms