RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PRAMEF22A3QJZ6 481 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 ZNF500O60304 480 aaPredicted RBP5.6□□□□□ -1.51
USP44-201ENST00000258499 PTGS1P23219 599 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 ME3Q16798 604 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 PROSER3Q2NL68 480 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 KSR2Q6VAB6 950 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 CDC37L1Q7L3B6 337 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 COPS6Q7L5N1 327 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 STK11IPQ8N1F8 1099 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 DNAJC25Q9H1X3 360 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 A0A087WZG4 1122 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 DCAF8L1A6NGE4 600 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 VPS53Q5VIR6 699 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 LARP1Q6PKG0 1096 aaKnown RBP5.6□□□□□ -1.51
USP44-201ENST00000258499 CCDC129Q6ZRS4 1044 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 XAGE3Q8WTP9 111 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 LSG1Q9H089 658 aaKnown RBP5.6□□□□□ -1.51
USP44-201ENST00000258499 A2ML1A8K2U0 1454 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 IGSF1Q8N6C5 1336 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 CPS1P31327 1500 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 ARHGEF10O15013 1369 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 CPSF1Q10570 1443 aaKnown RBP5.6□□□□□ -1.51
USP44-201ENST00000258499 SMC2O95347 1197 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 TPM3P06753 285 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 TYRO3Q06418 890 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 BEND3Q5T5X7 828 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 CHST3Q7LGC8 479 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 PDCL2Q8N4E4 241 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 KCNH5Q8NCM2 988 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 ANKRD24Q8TF21 1146 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 SUCLG2Q96I99 432 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 HYPKQ9NX55 129 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 TRMT1Q9NXH9 659 aaKnown RBP5.6□□□□□ -1.51
USP44-201ENST00000258499 ZHX1Q9UKY1 873 aaPredicted RBP5.6□□□□□ -1.51
USP44-201ENST00000258499 TTC41PQ6P2S7 1318 aa5.6□□□□□ -1.51
USP44-201ENST00000258499 RGS12O14924 1447 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 USP6P35125 1406 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 GOLIM4O00461 696 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 AMOTQ4VCS5 1084 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 PPP4R3BQ5MIZ7 849 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 HOMER1Q86YM7 354 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 LINS1Q8NG48 757 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 PI4K2BQ8TCG2 481 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 FAM200AQ8TCP9 573 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 EAF2Q96CJ1 260 aaPredicted RBP5.59□□□□□ -1.51
USP44-201ENST00000258499 NEK1Q96PY6 1258 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 SNRKQ9NRH2 765 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 CLIP2Q9UDT6 1046 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 MTMR6Q9Y217 621 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 ADGRB2O60241 1585 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 A0A0D9SFI3 127 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 JAK2O60674 1132 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 TATP17735 454 aaPredicted RBP5.59□□□□□ -1.51
USP44-201ENST00000258499 LIG1P18858 919 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 HAND2P61296 217 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 TPM4P67936 248 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 KRT32Q14532 448 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 STK38Q15208 465 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 AKAP4Q5JQC9 854 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 SYNE3Q6ZMZ3 975 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 RALYLQ86SE5 291 aaKnown RBP5.59□□□□□ -1.51
USP44-201ENST00000258499 CCDC112Q8NEF3 446 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 PDLIM2Q96JY6 352 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 TPCN1Q9ULQ1 816 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 CFAP74Q9C0B2 1584 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 MYO3AQ8NEV4 1616 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 ZC3H13Q5T200 1668 aaKnown RBP5.59□□□□□ -1.51
USP44-201ENST00000258499 SLC27A2O14975 620 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 IGSF3O75054 1194 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 TNNT1P13805 278 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 Q6ZUG5 572 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 ZNF771Q7L3S4 317 aaPredicted RBP5.59□□□□□ -1.51
USP44-201ENST00000258499 CREBRFQ8IUR6 639 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 TLR7Q9NYK1 1049 aaKnown RBP5.59□□□□□ -1.51
USP44-201ENST00000258499 CFAP45Q9UL16 551 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 FRMPD1Q5SYB0 1578 aa5.59□□□□□ -1.51
USP44-201ENST00000258499 AK9Q5TCS8 1911 aa5.59□□□□□ -1.52
USP44-201ENST00000258499 PIK3C2BO00750 1634 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 BIN1O00499 593 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 ALDH1L1O75891 902 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 ATP2B1P20020 1258 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 KCNA4P22459 653 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 CABP4P57796 275 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 TTC6Q86TZ1 520 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 PROSER2Q86WR7 435 aaPredicted RBP5.58□□□□□ -1.52
USP44-201ENST00000258499 NFATC2IPQ8NCF5 419 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 PIBF1Q8WXW3 757 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 IP6K1Q92551 441 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 DDX19AQ9NUU7 478 aaKnown RBP5.58□□□□□ -1.52
USP44-201ENST00000258499 AOX1Q06278 1338 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 RNMTO43148 476 aaKnown RBP5.58□□□□□ -1.52
USP44-201ENST00000258499 GCP02774 474 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 CHRNA2Q15822 529 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 ISM2Q6H9L7 571 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 ANKRD13DQ6ZTN6 518 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 ANKLE2Q86XL3 938 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 ERCC4Q92889 916 aaPredicted RBP5.58□□□□□ -1.52
USP44-201ENST00000258499 SIRT1Q96EB6 747 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 PRIMPOLQ96LW4 560 aa5.58□□□□□ -1.52
USP44-201ENST00000258499 POLR3DP05423 398 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms