RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 CDCA7LQ96GN5 454 aa23.94■■□□□ 1.42
UPK3B-201ENST00000257632 ARFGEF1Q9Y6D6 1849 aa23.94■■□□□ 1.42
UPK3B-201ENST00000257632 ABCC12Q96J65 1359 aa23.93■■□□□ 1.42
UPK3B-201ENST00000257632 ATP5J2-PTCD1G3V325 749 aa23.93■■□□□ 1.42
UPK3B-201ENST00000257632 TTLL6Q8N841 843 aa23.93■■□□□ 1.42
UPK3B-201ENST00000257632 TRMT112Q9UI30 125 aaKnown RBP23.92■■□□□ 1.42
UPK3B-201ENST00000257632 RNF123Q5XPI4 1314 aa23.91■■□□□ 1.42
UPK3B-201ENST00000257632 SRGNP10124 158 aa23.91■■□□□ 1.42
UPK3B-201ENST00000257632 KSR2Q6VAB6 950 aa23.91■■□□□ 1.42
UPK3B-201ENST00000257632 G2E3Q7L622 706 aa23.91■■□□□ 1.42
UPK3B-201ENST00000257632 MASTLQ96GX5 879 aa23.91■■□□□ 1.42
UPK3B-201ENST00000257632 MYD88Q99836 296 aa23.91■■□□□ 1.42
UPK3B-201ENST00000257632 ISCA1Q9BUE6 129 aa23.91■■□□□ 1.42
UPK3B-201ENST00000257632 MAP3K2Q9Y2U5 619 aa23.91■■□□□ 1.42
UPK3B-201ENST00000257632 FLIIQ13045 1269 aa23.9■■□□□ 1.42
UPK3B-201ENST00000257632 STYK1Q6J9G0 422 aa23.9■■□□□ 1.42
UPK3B-201ENST00000257632 CNKSR1Q969H4 720 aa23.9■■□□□ 1.42
UPK3B-201ENST00000257632 ZNF428Q96B54 188 aa23.9■■□□□ 1.42
UPK3B-201ENST00000257632 CACNA1SQ13698 1873 aa23.9■■□□□ 1.42
UPK3B-201ENST00000257632 TNRC6CQ9HCJ0 1690 aaKnown RBP23.89■■□□□ 1.42
UPK3B-201ENST00000257632 PI4KAP2A4QPH2 592 aa23.89■■□□□ 1.41
UPK3B-201ENST00000257632 NPR1P16066 1061 aa23.89■■□□□ 1.41
UPK3B-201ENST00000257632 FKBP5Q13451 457 aaPredicted RBP23.89■■□□□ 1.41
UPK3B-201ENST00000257632 ARHGAP27Q6ZUM4 889 aa23.89■■□□□ 1.41
UPK3B-201ENST00000257632 PI4KAP1Q8N8J0 262 aa23.89■■□□□ 1.41
UPK3B-201ENST00000257632 METTL22Q9BUU2 404 aaPredicted RBP23.89■■□□□ 1.41
UPK3B-201ENST00000257632 SH3TC1Q8TE82 1336 aa23.88■■□□□ 1.41
UPK3B-201ENST00000257632 RIC1Q4ADV7 1423 aa23.88■■□□□ 1.41
UPK3B-201ENST00000257632 KLRG2A4D1S0 409 aaPredicted RBP23.88■■□□□ 1.41
UPK3B-201ENST00000257632 NEXNQ0ZGT2 675 aa23.88■■□□□ 1.41
UPK3B-201ENST00000257632 TRIM28Q13263 835 aaKnown RBP23.87■■□□□ 1.41
UPK3B-201ENST00000257632 RPGRQ92834 1020 aaKnown RBP23.87■■□□□ 1.41
UPK3B-201ENST00000257632 NLRP3Q96P20 1036 aa23.87■■□□□ 1.41
UPK3B-201ENST00000257632 ADCY9O60503 1353 aa23.86■■□□□ 1.41
UPK3B-201ENST00000257632 SLC10A5Q5PT55 438 aa23.85■■□□□ 1.41
UPK3B-201ENST00000257632 TRMT2AQ8IZ69 625 aaKnown RBP23.85■■□□□ 1.41
UPK3B-201ENST00000257632 ZNF219Q9P2Y4 722 aaPredicted RBP23.85■■□□□ 1.41
UPK3B-201ENST00000257632 HCLS1P14317 486 aaPredicted RBP23.84■■□□□ 1.41
UPK3B-201ENST00000257632 CRY2Q49AN0 593 aa23.84■■□□□ 1.41
UPK3B-201ENST00000257632 RTL5Q5HYW3 569 aaPredicted RBP23.84■■□□□ 1.41
UPK3B-201ENST00000257632 PRPF40BQ6NWY9 871 aaKnown RBP23.84■■□□□ 1.41
UPK3B-201ENST00000257632 CCDC191Q8NCU4 936 aa23.84■■□□□ 1.41
UPK3B-201ENST00000257632 FAM89AQ96GI7 184 aa23.84■■□□□ 1.41
UPK3B-201ENST00000257632 CWC25Q9NXE8 425 aaPredicted RBP23.84■■□□□ 1.41
UPK3B-201ENST00000257632 SLX4Q8IY92 1834 aa23.83■■□□□ 1.41
UPK3B-201ENST00000257632 ALDH1B1P30837 517 aa23.83■■□□□ 1.41
UPK3B-201ENST00000257632 SYNE4Q8N205 404 aa23.83■■□□□ 1.41
UPK3B-201ENST00000257632 ZNF526Q8TF50 670 aaPredicted RBP23.83■■□□□ 1.41
UPK3B-201ENST00000257632 DNAAF4Q8WXU2 420 aa23.83■■□□□ 1.41
UPK3B-201ENST00000257632 C21orf2O43822 256 aa23.82■■□□□ 1.4
UPK3B-201ENST00000257632 RBM17Q96I25 401 aaKnown RBP23.82■■□□□ 1.4
UPK3B-201ENST00000257632 C3orf67Q6ZVT6 689 aa23.81■■□□□ 1.4
UPK3B-201ENST00000257632 ZBTB38Q8NAP3 1195 aaPredicted RBP23.81■■□□□ 1.4
UPK3B-201ENST00000257632 CT47B1P0C2W7 299 aaPredicted RBP23.8■■□□□ 1.4
UPK3B-201ENST00000257632 GPBP1L1Q9HC44 474 aaPredicted RBP23.8■■□□□ 1.4
UPK3B-201ENST00000257632 LAMB2P55268 1798 aa23.8■■□□□ 1.4
UPK3B-201ENST00000257632 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
UPK3B-201ENST00000257632 IRS4O14654 1257 aaPredicted RBP23.79■■□□□ 1.4
UPK3B-201ENST00000257632 IGKV5-2P06315 115 aa23.79■■□□□ 1.4
UPK3B-201ENST00000257632 HSP90B1P14625 803 aaKnown RBP23.79■■□□□ 1.4
UPK3B-201ENST00000257632 CWF19L2Q2TBE0 894 aaKnown RBP23.79■■□□□ 1.4
UPK3B-201ENST00000257632 SOGA3Q5TF21 947 aa23.79■■□□□ 1.4
UPK3B-201ENST00000257632 PCCAP05165 728 aaPredicted RBP23.78■■□□□ 1.4
UPK3B-201ENST00000257632 HOXA10P31260 410 aaPredicted RBP23.78■■□□□ 1.4
UPK3B-201ENST00000257632 MRPL50Q8N5N7 158 aaKnown RBP23.78■■□□□ 1.4
UPK3B-201ENST00000257632 SSH1Q8WYL5 1049 aa23.78■■□□□ 1.4
UPK3B-201ENST00000257632 BCL2L13Q9BXK5 485 aa23.78■■□□□ 1.4
UPK3B-201ENST00000257632 NEURL1BA8MQ27 555 aa23.77■■□□□ 1.4
UPK3B-201ENST00000257632 F6X3S4 739 aa23.77■■□□□ 1.4
UPK3B-201ENST00000257632 ALDH1L2Q3SY69 923 aa23.77■■□□□ 1.4
UPK3B-201ENST00000257632 CRAMP1Q96RY5 1269 aa23.77■■□□□ 1.4
UPK3B-201ENST00000257632 SMC4Q9NTJ3 1288 aa23.77■■□□□ 1.4
UPK3B-201ENST00000257632 ZBED9Q6R2W3 1325 aa23.77■■□□□ 1.4
UPK3B-201ENST00000257632 RASSF7Q02833 373 aa23.76■■□□□ 1.39
UPK3B-201ENST00000257632 LINS1Q8NG48 757 aa23.76■■□□□ 1.39
UPK3B-201ENST00000257632 JARID2Q92833 1246 aaPredicted RBP23.76■■□□□ 1.39
UPK3B-201ENST00000257632 CCDC93Q567U6 631 aa23.75■■□□□ 1.39
UPK3B-201ENST00000257632 DDX46Q7L014 1031 aaKnown RBP23.75■■□□□ 1.39
UPK3B-201ENST00000257632 SLC4A10Q6U841 1118 aa23.74■■□□□ 1.39
UPK3B-201ENST00000257632 FER1L6Q2WGJ9 1857 aa23.73■■□□□ 1.39
UPK3B-201ENST00000257632 PPEF1O14829 653 aaPredicted RBP23.73■■□□□ 1.39
UPK3B-201ENST00000257632 C9orf131Q5VYM1 1079 aa23.73■■□□□ 1.39
UPK3B-201ENST00000257632 C7orf43Q8WVR3 580 aa23.73■■□□□ 1.39
UPK3B-201ENST00000257632 TMX4Q9H1E5 349 aaPredicted RBP23.73■■□□□ 1.39
UPK3B-201ENST00000257632 RNF181Q9P0P0 153 aa23.73■■□□□ 1.39
UPK3B-201ENST00000257632 ABCC4O15439 1325 aa23.73■■□□□ 1.39
UPK3B-201ENST00000257632 PTPRCP08575 1304 aa23.73■■□□□ 1.39
UPK3B-201ENST00000257632 SBF1O95248 1867 aa23.73■■□□□ 1.39
UPK3B-201ENST00000257632 NFKBIEO00221 500 aa23.72■■□□□ 1.39
UPK3B-201ENST00000257632 PDE8AO60658 829 aa23.72■■□□□ 1.39
UPK3B-201ENST00000257632 GCKRQ14397 625 aa23.72■■□□□ 1.39
UPK3B-201ENST00000257632 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
UPK3B-201ENST00000257632 TAOK3Q9H2K8 898 aa23.72■■□□□ 1.39
UPK3B-201ENST00000257632 CDHR2Q9BYE9 1310 aa23.72■■□□□ 1.39
UPK3B-201ENST00000257632 BEND3Q5T5X7 828 aa23.71■■□□□ 1.39
UPK3B-201ENST00000257632 UBE3BQ7Z3V4 1068 aa23.71■■□□□ 1.39
UPK3B-201ENST00000257632 CCDC88AQ3V6T2 1871 aa23.7■■□□□ 1.39
UPK3B-201ENST00000257632 LMNB1P20700 586 aa23.7■■□□□ 1.38
UPK3B-201ENST00000257632 GRAPQ13588 217 aa23.7■■□□□ 1.38
UPK3B-201ENST00000257632 CC2D2BQ6DHV5 1058 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms