RNA–Protein interactions for RNA: ENST00000256495.3

BHLHE40-201, Transcript of basic helix-loop-helix family member e40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BHLHE40, Length 3,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE40-201ENST00000256495 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
BHLHE40-201ENST00000256495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.2■□□□□ 0.02
BHLHE40-201ENST00000256495 MCM4P33991 863 aa15.2■□□□□ 0.02
BHLHE40-201ENST00000256495 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
BHLHE40-201ENST00000256495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.2■□□□□ 0.02
BHLHE40-201ENST00000256495 EP400Q96L91 3159 aa15.2■□□□□ 0.02
BHLHE40-201ENST00000256495 PTH1RQ03431 593 aa15.19■□□□□ 0.02
BHLHE40-201ENST00000256495 POLA2Q14181 598 aa15.19■□□□□ 0.02
BHLHE40-201ENST00000256495 PI4K2BQ8TCG2 481 aa15.19■□□□□ 0.02
BHLHE40-201ENST00000256495 CNNM1Q9NRU3 951 aa15.19■□□□□ 0.02
BHLHE40-201ENST00000256495 ATG3Q9NT62 314 aa15.19■□□□□ 0.02
BHLHE40-201ENST00000256495 MED1Q15648 1581 aaPredicted RBP15.19■□□□□ 0.02
BHLHE40-201ENST00000256495 WASHC4Q2M389 1173 aa15.19■□□□□ 0.02
BHLHE40-201ENST00000256495 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
BHLHE40-201ENST00000256495 NMIQ13287 307 aaPredicted RBP15.18■□□□□ 0.02
BHLHE40-201ENST00000256495 IL27Q8NEV9 243 aa15.18■□□□□ 0.02
BHLHE40-201ENST00000256495 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
BHLHE40-201ENST00000256495 TRAK2O60296 914 aa15.18■□□□□ 0.02
BHLHE40-201ENST00000256495 PI16Q6UXB8 463 aa15.18■□□□□ 0.02
BHLHE40-201ENST00000256495 ERC1Q8IUD2 1116 aa15.18■□□□□ 0.02
BHLHE40-201ENST00000256495 PHF14O94880 888 aa15.17■□□□□ 0.02
BHLHE40-201ENST00000256495 PTF1AQ7RTS3 328 aa15.17■□□□□ 0.02
BHLHE40-201ENST00000256495 NECAB1Q8N987 351 aa15.17■□□□□ 0.02
BHLHE40-201ENST00000256495 DBNLQ9UJU6 430 aaKnown RBP15.17■□□□□ 0.02
BHLHE40-201ENST00000256495 CAMTA1Q9Y6Y1 1673 aa15.17■□□□□ 0.02
BHLHE40-201ENST00000256495 ERVV-2B6SEH9 535 aa15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 PTPN12Q05209 780 aaKnown RBP15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 TMX3Q96JJ7 454 aa15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 HEG1Q9ULI3 1381 aa15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 DZIP3Q86Y13 1208 aaKnown RBP15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 DDX49Q9Y6V7 483 aaKnown RBP15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 LDHAL6AQ6ZMR3 332 aa15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 CHST3Q7LGC8 479 aa15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 RAB11FIP4Q86YS3 637 aa15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 CEP126Q9P2H0 1117 aa15.16■□□□□ 0.02
BHLHE40-201ENST00000256495 A0A0D9SFI3 127 aa15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 TOM1O60784 492 aa15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 METTL24Q5JXM2 366 aa15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 HAND2P61296 217 aa15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 COL9A3Q14050 684 aaPredicted RBP15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 GBP4Q96PP9 640 aa15.15■□□□□ 0.02
BHLHE40-201ENST00000256495 IFIT5Q13325 482 aaKnown RBP15.14■□□□□ 0.01
BHLHE40-201ENST00000256495 TNNI3KQ59H18 835 aa15.14■□□□□ 0.01
BHLHE40-201ENST00000256495 FPGT-TNNI3KV9GXZ4 949 aa15.14■□□□□ 0.01
BHLHE40-201ENST00000256495 GOLGA6L22H0YM25 854 aa15.14■□□□□ 0.01
BHLHE40-201ENST00000256495 TAF5LO75529 589 aa15.14■□□□□ 0.01
BHLHE40-201ENST00000256495 APPP05067 770 aa15.14■□□□□ 0.01
BHLHE40-201ENST00000256495 CCDC83Q8IWF9 413 aa15.14■□□□□ 0.01
BHLHE40-201ENST00000256495 RUFY2Q8WXA3 655 aa15.14■□□□□ 0.01
BHLHE40-201ENST00000256495 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 ZKSCAN1P17029 563 aaPredicted RBP15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 ADORA1P30542 326 aa15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 ZNF589Q86UQ0 364 aaPredicted RBP15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 SLC4A9Q96Q91 983 aa15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 TAF6LQ9Y6J9 622 aa15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 JAG2Q9Y219 1238 aa15.13■□□□□ 0.01
BHLHE40-201ENST00000256495 SGSM2O43147 1006 aa15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 OSBPL3Q9H4L5 887 aa15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 IFIT1P09914 478 aaKnown RBP15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 GREM2Q9H772 168 aa15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 RBM8AQ9Y5S9 174 aaKnown RBP15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 A0A1B0GUL7 405 aa15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 IRS4O14654 1257 aaPredicted RBP15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
BHLHE40-201ENST00000256495 TTC39AQ5SRH9 613 aa15.11■□□□□ 0.01
BHLHE40-201ENST00000256495 EVI5LQ96CN4 794 aa15.11■□□□□ 0.01
BHLHE40-201ENST00000256495 NIP7Q9Y221 180 aaKnown RBP eCLIP15.11■□□□□ 0.01
BHLHE40-201ENST00000256495 TCIRG1Q13488 830 aa15.11■□□□□ 0.01
BHLHE40-201ENST00000256495 TOMM22Q9NS69 142 aa15.11■□□□□ 0.01
BHLHE40-201ENST00000256495 STAP2Q9UGK3 403 aa15.11■□□□□ 0.01
BHLHE40-201ENST00000256495 COL5A2P05997 1499 aaPredicted RBP15.1■□□□□ 0.01
BHLHE40-201ENST00000256495 MARCH10Q8NA82 808 aaPredicted RBP15.1■□□□□ 0.01
BHLHE40-201ENST00000256495 ITGA6P23229 1130 aa15.1■□□□□ 0.01
BHLHE40-201ENST00000256495 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
BHLHE40-201ENST00000256495 DDX11Q96FC9 970 aa15.1■□□□□ 0.01
BHLHE40-201ENST00000256495 SNX14Q9Y5W7 946 aa15.1■□□□□ 0.01
BHLHE40-201ENST00000256495 AK2P54819 239 aa15.09■□□□□ 0.01
BHLHE40-201ENST00000256495 SNX21Q969T3 373 aa15.09■□□□□ 0.01
BHLHE40-201ENST00000256495 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
BHLHE40-201ENST00000256495 SLC4A8Q2Y0W8 1093 aa15.09■□□□□ 0.01
BHLHE40-201ENST00000256495 MPHOSPH8Q99549 860 aa15.09■□□□□ 0.01
BHLHE40-201ENST00000256495 PDRG1Q9NUG6 133 aa15.09■□□□□ 0.01
BHLHE40-201ENST00000256495 RBM27Q9P2N5 1060 aaKnown RBP15.08■□□□□ 0.01
BHLHE40-201ENST00000256495 SALL3Q9BXA9 1300 aa15.08■□□□□ 0.01
BHLHE40-201ENST00000256495 LOC102724428A0A0B4J2F2 783 aa15.08■□□□□ 0
BHLHE40-201ENST00000256495 SIK1P57059 783 aa15.08■□□□□ 0
BHLHE40-201ENST00000256495 VPS53Q5VIR6 699 aa15.08■□□□□ 0
BHLHE40-201ENST00000256495 LRP10Q7Z4F1 713 aa15.08■□□□□ 0
BHLHE40-201ENST00000256495 CPDO75976 1380 aa15.08■□□□□ 0
BHLHE40-201ENST00000256495 NCAPD2Q15021 1401 aa15.08■□□□□ 0
BHLHE40-201ENST00000256495 CCDC191Q8NCU4 936 aa15.08■□□□□ 0
BHLHE40-201ENST00000256495 CRKLP46109 303 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms