RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TRMT112Q9UI30 125 aaKnown RBP23.08■■□□□ 1.29
SNRPA1-201ENST00000254193 DDX58O95786 925 aaKnown RBP23.07■■□□□ 1.28
SNRPA1-201ENST00000254193 PRPF40BQ6NWY9 871 aaKnown RBP23.07■■□□□ 1.28
SNRPA1-201ENST00000254193 C3orf67Q6ZVT6 689 aa23.07■■□□□ 1.28
SNRPA1-201ENST00000254193 C21orf2O43822 256 aa23.06■■□□□ 1.28
SNRPA1-201ENST00000254193 ZNF784Q8NCA9 323 aaPredicted RBP23.06■■□□□ 1.28
SNRPA1-201ENST00000254193 ANKRD31Q8N7Z5 1873 aa23.05■■□□□ 1.28
SNRPA1-201ENST00000254193 E9PSI1 815 aa23.05■■□□□ 1.28
SNRPA1-201ENST00000254193 HCLS1P14317 486 aaPredicted RBP23.05■■□□□ 1.28
SNRPA1-201ENST00000254193 CRY2Q49AN0 593 aa23.05■■□□□ 1.28
SNRPA1-201ENST00000254193 SLC10A5Q5PT55 438 aa23.05■■□□□ 1.28
SNRPA1-201ENST00000254193 CDCA7LQ96GN5 454 aa23.05■■□□□ 1.28
SNRPA1-201ENST00000254193 MYD88Q99836 296 aa23.05■■□□□ 1.28
SNRPA1-201ENST00000254193 MAP3K2Q9Y2U5 619 aa23.05■■□□□ 1.28
SNRPA1-201ENST00000254193 NUP98P52948 1817 aa23.04■■□□□ 1.28
SNRPA1-201ENST00000254193 PI4KAP2A4QPH2 592 aa23.04■■□□□ 1.28
SNRPA1-201ENST00000254193 SLFN5Q08AF3 891 aa23.04■■□□□ 1.28
SNRPA1-201ENST00000254193 TRIM28Q13263 835 aaKnown RBP23.04■■□□□ 1.28
SNRPA1-201ENST00000254193 KSR2Q6VAB6 950 aa23.04■■□□□ 1.28
SNRPA1-201ENST00000254193 PI4KAP1Q8N8J0 262 aa23.04■■□□□ 1.28
SNRPA1-201ENST00000254193 SH3TC1Q8TE82 1336 aa23.04■■□□□ 1.28
SNRPA1-201ENST00000254193 METTL22Q9BUU2 404 aaPredicted RBP23.03■■□□□ 1.28
SNRPA1-201ENST00000254193 RNF123Q5XPI4 1314 aa23.03■■□□□ 1.28
SNRPA1-201ENST00000254193 RASSF7Q02833 373 aa23.02■■□□□ 1.28
SNRPA1-201ENST00000254193 FLIIQ13045 1269 aa23.02■■□□□ 1.28
SNRPA1-201ENST00000254193 RPGRQ92834 1020 aaKnown RBP23.02■■□□□ 1.28
SNRPA1-201ENST00000254193 FAM89AQ96GI7 184 aa23.02■■□□□ 1.28
SNRPA1-201ENST00000254193 NLRP3Q96P20 1036 aa23.02■■□□□ 1.28
SNRPA1-201ENST00000254193 RIC1Q4ADV7 1423 aa23.01■■□□□ 1.27
SNRPA1-201ENST00000254193 BRCA1P38398 1863 aaKnown RBP23.01■■□□□ 1.27
SNRPA1-201ENST00000254193 RTL5Q5HYW3 569 aaPredicted RBP23.01■■□□□ 1.27
SNRPA1-201ENST00000254193 C9orf131Q5VYM1 1079 aa23.01■■□□□ 1.27
SNRPA1-201ENST00000254193 COL11A2P13942 1736 aaPredicted RBP23.01■■□□□ 1.27
SNRPA1-201ENST00000254193 ADCY9O60503 1353 aa23.01■■□□□ 1.27
SNRPA1-201ENST00000254193 NFKBIEO00221 500 aa23■■□□□ 1.27
SNRPA1-201ENST00000254193 ALDH1B1P30837 517 aa23■■□□□ 1.27
SNRPA1-201ENST00000254193 HOXA10P31260 410 aaPredicted RBP23■■□□□ 1.27
SNRPA1-201ENST00000254193 C7orf43Q8WVR3 580 aa23■■□□□ 1.27
SNRPA1-201ENST00000254193 FKBP5Q13451 457 aaPredicted RBP22.99■■□□□ 1.27
SNRPA1-201ENST00000254193 RBM17Q96I25 401 aaKnown RBP22.99■■□□□ 1.27
SNRPA1-201ENST00000254193 TNRC6CQ9HCJ0 1690 aaKnown RBP22.98■■□□□ 1.27
SNRPA1-201ENST00000254193 PRELPP51888 382 aa22.98■■□□□ 1.27
SNRPA1-201ENST00000254193 OLFM4Q6UX06 510 aa22.98■■□□□ 1.27
SNRPA1-201ENST00000254193 CCDC191Q8NCU4 936 aa22.98■■□□□ 1.27
SNRPA1-201ENST00000254193 RNF181Q9P0P0 153 aa22.98■■□□□ 1.27
SNRPA1-201ENST00000254193 IGKV5-2P06315 115 aa22.97■■□□□ 1.27
SNRPA1-201ENST00000254193 JARID2Q92833 1246 aaPredicted RBP22.97■■□□□ 1.27
SNRPA1-201ENST00000254193 CRAMP1Q96RY5 1269 aa22.97■■□□□ 1.27
SNRPA1-201ENST00000254193 CWC25Q9NXE8 425 aaPredicted RBP22.97■■□□□ 1.27
SNRPA1-201ENST00000254193 DLEC1Q9Y238 1755 aa22.96■■□□□ 1.27
SNRPA1-201ENST00000254193 NEXNQ0ZGT2 675 aa22.96■■□□□ 1.27
SNRPA1-201ENST00000254193 TRMT2AQ8IZ69 625 aaKnown RBP22.96■■□□□ 1.27
SNRPA1-201ENST00000254193 ZBTB38Q8NAP3 1195 aaPredicted RBP22.96■■□□□ 1.27
SNRPA1-201ENST00000254193 IRS4O14654 1257 aaPredicted RBP22.95■■□□□ 1.26
SNRPA1-201ENST00000254193 LMNB1P20700 586 aa22.95■■□□□ 1.26
SNRPA1-201ENST00000254193 CWF19L2Q2TBE0 894 aaKnown RBP22.95■■□□□ 1.26
SNRPA1-201ENST00000254193 SOGA3Q5TF21 947 aa22.95■■□□□ 1.26
SNRPA1-201ENST00000254193 ZNF526Q8TF50 670 aaPredicted RBP22.95■■□□□ 1.26
SNRPA1-201ENST00000254193 CHD4Q14839 1912 aa22.94■■□□□ 1.26
SNRPA1-201ENST00000254193 PCCAP05165 728 aaPredicted RBP22.94■■□□□ 1.26
SNRPA1-201ENST00000254193 CCDC93Q567U6 631 aa22.94■■□□□ 1.26
SNRPA1-201ENST00000254193 SLC51AQ86UW1 340 aa22.94■■□□□ 1.26
SNRPA1-201ENST00000254193 DNAAF4Q8WXU2 420 aa22.94■■□□□ 1.26
SNRPA1-201ENST00000254193 ARFGEF1Q9Y6D6 1849 aa22.94■■□□□ 1.26
SNRPA1-201ENST00000254193 F6X3S4 739 aa22.93■■□□□ 1.26
SNRPA1-201ENST00000254193 HNRNPUQ00839 825 aaKnown RBP eCLIP22.93■■□□□ 1.26
SNRPA1-201ENST00000254193 TAOK3Q9H2K8 898 aa22.93■■□□□ 1.26
SNRPA1-201ENST00000254193 ABCC4O15439 1325 aa22.92■■□□□ 1.26
SNRPA1-201ENST00000254193 NEURL1BA8MQ27 555 aa22.92■■□□□ 1.26
SNRPA1-201ENST00000254193 PPEF1O14829 653 aaPredicted RBP22.92■■□□□ 1.26
SNRPA1-201ENST00000254193 SLX4Q8IY92 1834 aa22.92■■□□□ 1.26
SNRPA1-201ENST00000254193 DDX46Q7L014 1031 aaKnown RBP22.91■■□□□ 1.26
SNRPA1-201ENST00000254193 ANKRD36CQ5JPF3 1778 aa22.91■■□□□ 1.26
SNRPA1-201ENST00000254193 ARFGEF2Q9Y6D5 1785 aa22.91■■□□□ 1.26
SNRPA1-201ENST00000254193 SF3B3Q15393 1217 aaKnown RBP22.9■■□□□ 1.26
SNRPA1-201ENST00000254193 RTKN2Q8IZC4 609 aa22.9■■□□□ 1.26
SNRPA1-201ENST00000254193 MRPL50Q8N5N7 158 aaKnown RBP22.9■■□□□ 1.26
SNRPA1-201ENST00000254193 SSH1Q8WYL5 1049 aa22.9■■□□□ 1.26
SNRPA1-201ENST00000254193 LTBP3Q9NS15 1303 aa22.89■■□□□ 1.26
SNRPA1-201ENST00000254193 LINS1Q8NG48 757 aa22.89■■□□□ 1.25
SNRPA1-201ENST00000254193 BCL2L13Q9BXK5 485 aa22.89■■□□□ 1.25
SNRPA1-201ENST00000254193 GPBP1L1Q9HC44 474 aaPredicted RBP22.89■■□□□ 1.25
SNRPA1-201ENST00000254193 BBOX1O75936 387 aa22.88■■□□□ 1.25
SNRPA1-201ENST00000254193 FKBP4Q02790 459 aaKnown RBP eCLIP22.88■■□□□ 1.25
SNRPA1-201ENST00000254193 GCKRQ14397 625 aa22.88■■□□□ 1.25
SNRPA1-201ENST00000254193 HSP90B1P14625 803 aaKnown RBP22.87■■□□□ 1.25
SNRPA1-201ENST00000254193 GRAPQ13588 217 aa22.87■■□□□ 1.25
SNRPA1-201ENST00000254193 CC2D2BQ6DHV5 1058 aa22.87■■□□□ 1.25
SNRPA1-201ENST00000254193 GRAPLQ8TC17 118 aaPredicted RBP22.87■■□□□ 1.25
SNRPA1-201ENST00000254193 ZNF277Q9NRM2 450 aaPredicted RBP22.87■■□□□ 1.25
SNRPA1-201ENST00000254193 ATP6V0A2Q9Y487 856 aa22.87■■□□□ 1.25
SNRPA1-201ENST00000254193 H7C1W4 665 aa22.86■■□□□ 1.25
SNRPA1-201ENST00000254193 PDE8AO60658 829 aa22.86■■□□□ 1.25
SNRPA1-201ENST00000254193 BEND3Q5T5X7 828 aa22.86■■□□□ 1.25
SNRPA1-201ENST00000254193 UBE3BQ7Z3V4 1068 aa22.86■■□□□ 1.25
SNRPA1-201ENST00000254193 CCDC85AQ96PX6 553 aaPredicted RBP22.86■■□□□ 1.25
SNRPA1-201ENST00000254193 CDHR2Q9BYE9 1310 aa22.85■■□□□ 1.25
SNRPA1-201ENST00000254193 CELF1Q92879 486 aaKnown RBP22.85■■□□□ 1.25
SNRPA1-201ENST00000254193 CT47B1P0C2W7 299 aaPredicted RBP22.84■■□□□ 1.25
SNRPA1-201ENST00000254193 SLC4A10Q6U841 1118 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms