RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 PNMA6EA0A0J9YXQ4 647 aa13.99□□□□□ -0.17
CLUHP3-201ENST00000254109 PDE1AP54750 535 aa13.99□□□□□ -0.17
CLUHP3-201ENST00000254109 PLBD2Q8NHP8 589 aa13.99□□□□□ -0.17
CLUHP3-201ENST00000254109 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
CLUHP3-201ENST00000254109 DZIP3Q86Y13 1208 aaKnown RBP13.99□□□□□ -0.17
CLUHP3-201ENST00000254109 SPRYD3Q8NCJ5 442 aa13.99□□□□□ -0.17
CLUHP3-201ENST00000254109 IBTKQ9P2D0 1353 aaPredicted RBP13.99□□□□□ -0.17
CLUHP3-201ENST00000254109 ARFGEF2Q9Y6D5 1785 aa13.99□□□□□ -0.17
CLUHP3-201ENST00000254109 RPS6KA4O75676 772 aa13.98□□□□□ -0.17
CLUHP3-201ENST00000254109 PHF14O94880 888 aa13.98□□□□□ -0.17
CLUHP3-201ENST00000254109 AK7Q96M32 723 aa13.98□□□□□ -0.17
CLUHP3-201ENST00000254109 CHMP5Q9NZZ3 219 aa13.98□□□□□ -0.17
CLUHP3-201ENST00000254109 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
CLUHP3-201ENST00000254109 COL15A1P39059 1388 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 HLFQ16534 295 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 BEND3Q5T5X7 828 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 KIF6Q6ZMV9 814 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 MYD88Q99836 296 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 RGPD3A6NKT7 1758 aaPredicted RBP13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 RGPD4Q7Z3J3 1758 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 MAP3K15Q6ZN16 1313 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 REC8O95072 547 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 BAG6P46379 1132 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 GSE1Q14687 1217 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 ZNF827Q17R98 1081 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 CWF19L2Q2TBE0 894 aaKnown RBP13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 SSH3Q8TE77 659 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 KIF2CQ99661 725 aa13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 METTL22Q9BUU2 404 aaPredicted RBP13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
CLUHP3-201ENST00000254109 ATP5J2-PTCD1G3V325 749 aa13.96□□□□□ -0.17
CLUHP3-201ENST00000254109 MX1P20591 662 aa13.96□□□□□ -0.17
CLUHP3-201ENST00000254109 UBR3Q6ZT12 1888 aa13.96□□□□□ -0.18
CLUHP3-201ENST00000254109 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
CLUHP3-201ENST00000254109 ILDR2Q71H61 639 aa13.95□□□□□ -0.18
CLUHP3-201ENST00000254109 PPP1R42Q7Z4L9 355 aa13.95□□□□□ -0.18
CLUHP3-201ENST00000254109 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
CLUHP3-201ENST00000254109 NUP98P52948 1817 aa13.95□□□□□ -0.18
CLUHP3-201ENST00000254109 ERC2O15083 957 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 ALDH1L1O75891 902 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 CAMTA2O94983 1202 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 POLA2Q14181 598 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 USP26Q9BXU7 913 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 SRGAP3O43295 1099 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 HSP90AA1P07900 732 aaKnown RBP13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 NEXNQ0ZGT2 675 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 RABEP1Q15276 862 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 HSP90AB4PQ58FF6 505 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 LINS1Q8NG48 757 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 UPF1Q92900 1129 aaKnown RBP eCLIP13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 STAP2Q9UGK3 403 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 AOX1Q06278 1338 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
CLUHP3-201ENST00000254109 AFDNP55196 1824 aaKnown RBP13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 A0A087WZG4 1122 aa13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 NEURL1BA8MQ27 555 aa13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 K7ELQ4 463 aaPredicted RBP13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 NBPF7P0C2Y1 421 aaPredicted RBP13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 TCIRG1Q13488 830 aa13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 TRAPPC3LQ5T215 181 aa13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 ANO8Q9HCE9 1232 aaPredicted RBP13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 C9orf78Q9NZ63 289 aaPredicted RBP13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 TUBGCP6Q96RT7 1819 aa13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 C4AP0C0L4 1744 aa13.93□□□□□ -0.18
CLUHP3-201ENST00000254109 ERVV-1B6SEH8 477 aa13.92□□□□□ -0.18
CLUHP3-201ENST00000254109 GPTP24298 496 aa13.92□□□□□ -0.18
CLUHP3-201ENST00000254109 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
CLUHP3-201ENST00000254109 JARID2Q92833 1246 aaPredicted RBP13.92□□□□□ -0.18
CLUHP3-201ENST00000254109 KIF1BPQ96EK5 621 aa13.92□□□□□ -0.18
CLUHP3-201ENST00000254109 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
CLUHP3-201ENST00000254109 BCORQ6W2J9 1755 aa13.92□□□□□ -0.18
CLUHP3-201ENST00000254109 TRIM6-TRIM34B2RNG4 842 aa13.91□□□□□ -0.18
CLUHP3-201ENST00000254109 RFC4P35249 363 aa13.91□□□□□ -0.18
CLUHP3-201ENST00000254109 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
CLUHP3-201ENST00000254109 NARFQ9UHQ1 456 aa13.91□□□□□ -0.18
CLUHP3-201ENST00000254109 ZPR1O75312 459 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 GCKRQ14397 625 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 RHPN1Q8TCX5 695 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 ISCA1Q9BUE6 129 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 ANKRD36CQ5JPF3 1778 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 SSFA2P28290 1259 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 IL1RAPL2Q9NP60 686 aa13.9□□□□□ -0.18
CLUHP3-201ENST00000254109 SCN7AQ01118 1682 aa13.89□□□□□ -0.19
CLUHP3-201ENST00000254109 UBN2Q6ZU65 1347 aa13.89□□□□□ -0.19
CLUHP3-201ENST00000254109 ADRA2BP18089 450 aa13.89□□□□□ -0.19
CLUHP3-201ENST00000254109 HMGB2P26583 209 aaKnown RBP13.89□□□□□ -0.19
CLUHP3-201ENST00000254109 OS9Q13438 667 aaPredicted RBP13.89□□□□□ -0.19
CLUHP3-201ENST00000254109 MTX1Q13505 466 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms