RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 KDM4AO75164 1064 aa22.65■■□□□ 1.22
SNX4-201ENST00000251775 RAPGEF4Q8WZA2 1011 aa22.65■■□□□ 1.22
SNX4-201ENST00000251775 KAZALD1Q96I82 304 aa22.65■■□□□ 1.22
SNX4-201ENST00000251775 LETM1O95202 739 aaPredicted RBP22.64■■□□□ 1.22
SNX4-201ENST00000251775 CLASRPQ8N2M8 674 aaKnown RBP22.64■■□□□ 1.22
SNX4-201ENST00000251775 SUCLG2Q96I99 432 aa22.64■■□□□ 1.22
SNX4-201ENST00000251775 ZNF790Q6PG37 636 aa22.64■■□□□ 1.21
SNX4-201ENST00000251775 LSG1Q9H089 658 aaKnown RBP22.64■■□□□ 1.21
SNX4-201ENST00000251775 NPHP3Q7Z494 1330 aa22.63■■□□□ 1.21
SNX4-201ENST00000251775 GRM8O00222 908 aa22.63■■□□□ 1.21
SNX4-201ENST00000251775 GLRX3O76003 335 aaKnown RBP22.63■■□□□ 1.21
SNX4-201ENST00000251775 SLC52A2Q9HAB3 445 aa22.63■■□□□ 1.21
SNX4-201ENST00000251775 COL18A1P39060 1754 aa22.63■■□□□ 1.21
SNX4-201ENST00000251775 UTYO14607 1347 aa22.62■■□□□ 1.21
SNX4-201ENST00000251775 ZSCAN22P10073 491 aaPredicted RBP22.62■■□□□ 1.21
SNX4-201ENST00000251775 UBE2HP62256 183 aa22.62■■□□□ 1.21
SNX4-201ENST00000251775 CWC27Q6UX04 472 aaKnown RBP22.62■■□□□ 1.21
SNX4-201ENST00000251775 BCL2L12Q9HB09 334 aa22.62■■□□□ 1.21
SNX4-201ENST00000251775 DDX58O95786 925 aaKnown RBP22.62■■□□□ 1.21
SNX4-201ENST00000251775 PHKG2P15735 406 aa22.62■■□□□ 1.21
SNX4-201ENST00000251775 CBX1P83916 185 aa22.62■■□□□ 1.21
SNX4-201ENST00000251775 FUCA2Q9BTY2 467 aa22.62■■□□□ 1.21
SNX4-201ENST00000251775 SNX14Q9Y5W7 946 aa22.62■■□□□ 1.21
SNX4-201ENST00000251775 TPRNQ4KMQ1 711 aa22.61■■□□□ 1.21
SNX4-201ENST00000251775 NFATC2IPQ8NCF5 419 aa22.61■■□□□ 1.21
SNX4-201ENST00000251775 HDAC5Q9UQL6 1122 aa22.61■■□□□ 1.21
SNX4-201ENST00000251775 MEGF6O75095 1541 aa22.61■■□□□ 1.21
SNX4-201ENST00000251775 IGKV5-2P06315 115 aa22.61■■□□□ 1.21
SNX4-201ENST00000251775 ATP2B3Q16720 1220 aa22.61■■□□□ 1.21
SNX4-201ENST00000251775 PPP4R3BQ5MIZ7 849 aa22.61■■□□□ 1.21
SNX4-201ENST00000251775 BICC1Q9H694 974 aaKnown RBP22.61■■□□□ 1.21
SNX4-201ENST00000251775 ECHDC1Q9NTX5 307 aa22.61■■□□□ 1.21
SNX4-201ENST00000251775 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.61■■□□□ 1.21
SNX4-201ENST00000251775 AP5Z1O43299 807 aa22.6■■□□□ 1.21
SNX4-201ENST00000251775 TATP17735 454 aaPredicted RBP22.6■■□□□ 1.21
SNX4-201ENST00000251775 SPG7Q9UQ90 795 aa22.6■■□□□ 1.21
SNX4-201ENST00000251775 STRCP1A6NGW2 1772 aa22.6■■□□□ 1.21
SNX4-201ENST00000251775 ERC1Q8IUD2 1116 aa22.6■■□□□ 1.21
SNX4-201ENST00000251775 RASEFQ8IZ41 740 aa22.6■■□□□ 1.21
SNX4-201ENST00000251775 CABLES1Q8TDN4 633 aa22.6■■□□□ 1.21
SNX4-201ENST00000251775 MYL6BP14649 208 aa22.59■■□□□ 1.21
SNX4-201ENST00000251775 ATF3P18847 181 aa22.59■■□□□ 1.21
SNX4-201ENST00000251775 KIAA1524Q8TCG1 905 aa22.59■■□□□ 1.21
SNX4-201ENST00000251775 KCNF1Q9H3M0 494 aa22.59■■□□□ 1.21
SNX4-201ENST00000251775 TMEM94Q12767 1356 aa22.59■■□□□ 1.21
SNX4-201ENST00000251775 SASH1O94885 1247 aa22.59■■□□□ 1.21
SNX4-201ENST00000251775 IFIT2P09913 472 aaKnown RBP22.59■■□□□ 1.21
SNX4-201ENST00000251775 RIC3Q7Z5B4 369 aa22.59■■□□□ 1.21
SNX4-201ENST00000251775 AACSQ86V21 672 aa22.58■■□□□ 1.21
SNX4-201ENST00000251775 STX6O43752 255 aa22.58■■□□□ 1.2
SNX4-201ENST00000251775 SYT1P21579 422 aa22.58■■□□□ 1.2
SNX4-201ENST00000251775 GIMAP6Q6P9H5 292 aa22.58■■□□□ 1.2
SNX4-201ENST00000251775 TTC14Q96N46 770 aa22.58■■□□□ 1.2
SNX4-201ENST00000251775 PYCARDQ9ULZ3 195 aa22.58■■□□□ 1.2
SNX4-201ENST00000251775 ZNF496Q96IT1 587 aaPredicted RBP22.57■■□□□ 1.2
SNX4-201ENST00000251775 DIAPH3Q9NSV4 1193 aa22.57■■□□□ 1.2
SNX4-201ENST00000251775 FIBPO43427 364 aa22.57■■□□□ 1.2
SNX4-201ENST00000251775 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
SNX4-201ENST00000251775 XAGE3Q8WTP9 111 aa22.57■■□□□ 1.2
SNX4-201ENST00000251775 F13A1P00488 732 aa22.56■■□□□ 1.2
SNX4-201ENST00000251775 PLCB2Q00722 1185 aa22.56■■□□□ 1.2
SNX4-201ENST00000251775 CSB-PGBD3P0DP91 1061 aa22.56■■□□□ 1.2
SNX4-201ENST00000251775 CHRNA2Q15822 529 aa22.56■■□□□ 1.2
SNX4-201ENST00000251775 IFNL2Q8IZJ0 200 aa22.56■■□□□ 1.2
SNX4-201ENST00000251775 EAF2Q96CJ1 260 aaPredicted RBP22.56■■□□□ 1.2
SNX4-201ENST00000251775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.56■■□□□ 1.22e-6■■□□□ 14.4
SNX4-201ENST00000251775 NEURL1BA8MQ27 555 aa22.55■■□□□ 1.2
SNX4-201ENST00000251775 AK2P54819 239 aa22.55■■□□□ 1.2
SNX4-201ENST00000251775 COPS6Q7L5N1 327 aa22.55■■□□□ 1.2
SNX4-201ENST00000251775 GPATCH3Q96I76 525 aa22.55■■□□□ 1.2
SNX4-201ENST00000251775 RIOK3O14730 519 aaKnown RBP22.55■■□□□ 1.2
SNX4-201ENST00000251775 PTH1RQ03431 593 aa22.55■■□□□ 1.2
SNX4-201ENST00000251775 G3BP1Q13283 466 aaKnown RBP eCLIP22.55■■□□□ 1.2
SNX4-201ENST00000251775 GTPBP4Q9BZE4 634 aaKnown RBP22.55■■□□□ 1.2
SNX4-201ENST00000251775 USP16Q9Y5T5 823 aa22.55■■□□□ 1.2
SNX4-201ENST00000251775 RUFY3Q7L099 469 aa22.54■■□□□ 1.2
SNX4-201ENST00000251775 LARP6Q9BRS8 491 aaKnown RBP22.54■■□□□ 1.2
SNX4-201ENST00000251775 CYP27B1O15528 508 aa22.54■■□□□ 1.2
SNX4-201ENST00000251775 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
SNX4-201ENST00000251775 PDCL2Q8N4E4 241 aa22.54■■□□□ 1.2
SNX4-201ENST00000251775 RUFY2Q8WXA3 655 aa22.54■■□□□ 1.2
SNX4-201ENST00000251775 PIP4K2AP48426 406 aaPredicted RBP22.53■■□□□ 1.2
SNX4-201ENST00000251775 EPHA10Q5JZY3 1008 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 LRP10Q7Z4F1 713 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 EVI5LQ96CN4 794 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 MYD88Q99836 296 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 CCDC8Q9H0W5 538 aaPredicted RBP22.53■■□□□ 1.2
SNX4-201ENST00000251775 NEXNQ0ZGT2 675 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 GCKRQ14397 625 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 KLHDC4Q8TBB5 520 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 ANKRD7Q92527 254 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 METTL22Q9BUU2 404 aaPredicted RBP22.53■■□□□ 1.2
SNX4-201ENST00000251775 SIL1Q9H173 461 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 LIMCH1Q9UPQ0 1083 aa22.53■■□□□ 1.2
SNX4-201ENST00000251775 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.53■■□□□ 1.2
SNX4-201ENST00000251775 TLR7Q9NYK1 1049 aaKnown RBP22.52■■□□□ 1.2
SNX4-201ENST00000251775 ABCC6O95255 1503 aa22.52■■□□□ 1.2
SNX4-201ENST00000251775 CPA1P15085 419 aa22.52■■□□□ 1.19
SNX4-201ENST00000251775 SMC3Q9UQE7 1217 aa22.52■■□□□ 1.19
SNX4-201ENST00000251775 ATP6V1DQ9Y5K8 247 aa22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms