RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 LIMCH1Q9UPQ0 1083 aa23.54■■□□□ 1.36
CDC42EP1-201ENST00000249014 TCHHQ07283 1943 aa23.54■■□□□ 1.36
CDC42EP1-201ENST00000249014 KCNB2Q92953 911 aa23.54■■□□□ 1.36
CDC42EP1-201ENST00000249014 BOLA2Q9H3K6 86 aa23.54■■□□□ 1.36
CDC42EP1-201ENST00000249014 PARP4Q9UKK3 1724 aaKnown RBP23.54■■□□□ 1.36
CDC42EP1-201ENST00000249014 CCDC171Q6TFL3 1326 aa23.53■■□□□ 1.36
CDC42EP1-201ENST00000249014 NMIQ13287 307 aaPredicted RBP23.53■■□□□ 1.36
CDC42EP1-201ENST00000249014 NECTIN1Q15223 517 aa23.53■■□□□ 1.36
CDC42EP1-201ENST00000249014 RFX5P48382 616 aaPredicted RBP23.52■■□□□ 1.36
CDC42EP1-201ENST00000249014 FOXD4L6Q3SYB3 417 aaPredicted RBP23.52■■□□□ 1.36
CDC42EP1-201ENST00000249014 FOXD4L3Q6VB84 417 aaPredicted RBP23.52■■□□□ 1.36
CDC42EP1-201ENST00000249014 WDR33Q9C0J8 1336 aaKnown RBP23.52■■□□□ 1.36
CDC42EP1-201ENST00000249014 ATP5J2-PTCD1G3V325 749 aa23.51■■□□□ 1.35
CDC42EP1-201ENST00000249014 PTCD1O75127 700 aaKnown RBP23.51■■□□□ 1.35
CDC42EP1-201ENST00000249014 LARGE1O95461 756 aa23.51■■□□□ 1.35
CDC42EP1-201ENST00000249014 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
CDC42EP1-201ENST00000249014 UBE3BQ7Z3V4 1068 aa23.51■■□□□ 1.35
CDC42EP1-201ENST00000249014 JAKMIP1Q96N16 626 aaKnown RBP23.51■■□□□ 1.35
CDC42EP1-201ENST00000249014 COPRSQ9NQ92 184 aa23.51■■□□□ 1.35
CDC42EP1-201ENST00000249014 HSPA2P54652 639 aa23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 PTPN12Q05209 780 aaKnown RBP23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 RBSNQ9H1K0 784 aa23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 ZSWIM6Q9HCJ5 1215 aa23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 RBM8AQ9Y5S9 174 aaKnown RBP23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 A0A0D9SFI3 127 aa23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 HIP1O00291 1037 aa23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 MAP4K1Q92918 833 aa23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 SNRKQ9NRH2 765 aa23.5■■□□□ 1.35
CDC42EP1-201ENST00000249014 ERBB4Q15303 1308 aa23.49■■□□□ 1.35
CDC42EP1-201ENST00000249014 MBD3O95983 291 aa23.49■■□□□ 1.35
CDC42EP1-201ENST00000249014 RABL6Q3YEC7 729 aaPredicted RBP23.49■■□□□ 1.35
CDC42EP1-201ENST00000249014 VPS53Q5VIR6 699 aa23.49■■□□□ 1.35
CDC42EP1-201ENST00000249014 BRINP3Q76B58 766 aa23.49■■□□□ 1.35
CDC42EP1-201ENST00000249014 FSD1Q9BTV5 496 aa23.49■■□□□ 1.35
CDC42EP1-201ENST00000249014 TM6SF1Q9BZW5 370 aa23.49■■□□□ 1.35
CDC42EP1-201ENST00000249014 DDX54Q8TDD1 881 aaKnown RBP23.48■■□□□ 1.35
CDC42EP1-201ENST00000249014 PPP1R9BQ96SB3 815 aa23.48■■□□□ 1.35
CDC42EP1-201ENST00000249014 GDPD2Q9HCC8 539 aa23.48■■□□□ 1.35
CDC42EP1-201ENST00000249014 PDRG1Q9NUG6 133 aa23.48■■□□□ 1.35
CDC42EP1-201ENST00000249014 A0A087WZG4 1122 aa23.48■■□□□ 1.35
CDC42EP1-201ENST00000249014 CCDC173Q0VFZ6 552 aa23.48■■□□□ 1.35
CDC42EP1-201ENST00000249014 CREB3L3Q68CJ9 461 aa23.48■■□□□ 1.35
CDC42EP1-201ENST00000249014 COL15A1P39059 1388 aa23.48■■□□□ 1.35
CDC42EP1-201ENST00000249014 SYCE3A1L190 88 aa23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 NBPF26B4DH59 902 aa23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 CASP7P55210 303 aa23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 NBPF14Q5TI25 921 aa23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 NBPF10Q6P3W6 841 aaKnown RBP23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 NBPF15Q8N660 670 aa23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 PLBD2Q8NHP8 589 aa23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 EDC3Q96F86 508 aaKnown RBP23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 DBNLQ9UJU6 430 aaKnown RBP23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 CYP46A1Q9Y6A2 500 aa23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 TFCP2Q12800 502 aa23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 COL9A3Q14050 684 aaPredicted RBP23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 TRIM44Q96DX7 344 aaPredicted RBP23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.47■■□□□ 1.35
CDC42EP1-201ENST00000249014 MED23Q9ULK4 1368 aa23.46■■□□□ 1.35
CDC42EP1-201ENST00000249014 CLCN1P35523 988 aa23.46■■□□□ 1.35
CDC42EP1-201ENST00000249014 TNNI3KQ59H18 835 aa23.46■■□□□ 1.35
CDC42EP1-201ENST00000249014 FPGT-TNNI3KV9GXZ4 949 aa23.46■■□□□ 1.35
CDC42EP1-201ENST00000249014 UBR2Q8IWV8 1755 aa23.46■■□□□ 1.35
CDC42EP1-201ENST00000249014 WDR17Q8IZU2 1322 aa23.45■■□□□ 1.35
CDC42EP1-201ENST00000249014 ESPNB1AK53 854 aa23.45■■□□□ 1.35
CDC42EP1-201ENST00000249014 GADD45BO75293 160 aaPredicted RBP23.45■■□□□ 1.35
CDC42EP1-201ENST00000249014 ZKSCAN1P17029 563 aaPredicted RBP23.45■■□□□ 1.35
CDC42EP1-201ENST00000249014 SYT1P21579 422 aa23.45■■□□□ 1.35
CDC42EP1-201ENST00000249014 LRSAM1Q6UWE0 723 aa23.45■■□□□ 1.35
CDC42EP1-201ENST00000249014 DTNBO60941 627 aa23.45■■□□□ 1.34
CDC42EP1-201ENST00000249014 USP48Q86UV5 1035 aa23.45■■□□□ 1.34
CDC42EP1-201ENST00000249014 CCDC83Q8IWF9 413 aa23.45■■□□□ 1.34
CDC42EP1-201ENST00000249014 SLC27A2O14975 620 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 ZSCAN22P10073 491 aaPredicted RBP23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 KCNJ4P48050 445 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 ST3GAL1Q11201 340 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 ZNF589Q86UQ0 364 aaPredicted RBP23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 ANO8Q9HCE9 1232 aaPredicted RBP23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 PRDM11Q9NQV5 511 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 SMC3Q9UQE7 1217 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 PCDH11XQ9BZA7 1347 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 PCDH11YQ9BZA8 1340 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 STX6O43752 255 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 TOM1L2Q6ZVM7 507 aa23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 ZCRB1Q8TBF4 217 aaKnown RBP23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.44■■□□□ 1.34
CDC42EP1-201ENST00000249014 NUP188Q5SRE5 1749 aa23.43■■□□□ 1.34
CDC42EP1-201ENST00000249014 ATP5JP18859 108 aa23.42■■□□□ 1.34
CDC42EP1-201ENST00000249014 ME3Q16798 604 aa23.42■■□□□ 1.34
CDC42EP1-201ENST00000249014 TAF6LQ9Y6J9 622 aa23.42■■□□□ 1.34
CDC42EP1-201ENST00000249014 TTLL7Q6ZT98 887 aa23.42■■□□□ 1.34
CDC42EP1-201ENST00000249014 ANP32BQ92688 251 aaKnown RBP23.42■■□□□ 1.34
CDC42EP1-201ENST00000249014 NDUFB9Q9Y6M9 179 aa23.42■■□□□ 1.34
CDC42EP1-201ENST00000249014 JCADQ9P266 1359 aa23.42■■□□□ 1.34
CDC42EP1-201ENST00000249014 COL5A2P05997 1499 aaPredicted RBP23.42■■□□□ 1.34
CDC42EP1-201ENST00000249014 ZSCAN31Q96LW9 406 aaPredicted RBP23.41■■□□□ 1.34
CDC42EP1-201ENST00000249014 KCPQ6ZWJ8 1503 aa23.41■■□□□ 1.34
CDC42EP1-201ENST00000249014 GJB2P29033 226 aa23.41■■□□□ 1.34
CDC42EP1-201ENST00000249014 FOXO4P98177 505 aa23.41■■□□□ 1.34
CDC42EP1-201ENST00000249014 LMBR1LQ6UX01 489 aa23.41■■□□□ 1.34
CDC42EP1-201ENST00000249014 SH2B1Q9NRF2 756 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms