RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ERFEQ4G0M1 354 aa31.27■■■□□ 2.6
SDF2L1-201ENST00000248958 ARHGAP27Q6ZUM4 889 aa31.27■■■□□ 2.6
SDF2L1-201ENST00000248958 E9PSI1 815 aa31.26■■■□□ 2.59
SDF2L1-201ENST00000248958 NPR1P16066 1061 aa31.26■■■□□ 2.59
SDF2L1-201ENST00000248958 GOLGB1Q14789 3259 aaKnown RBP31.25■■■□□ 2.59
SDF2L1-201ENST00000248958 ZNF784Q8NCA9 323 aaPredicted RBP31.25■■■□□ 2.59
SDF2L1-201ENST00000248958 ISCA1Q9BUE6 129 aa31.25■■■□□ 2.59
SDF2L1-201ENST00000248958 ABCC12Q96J65 1359 aa31.25■■■□□ 2.59
SDF2L1-201ENST00000248958 SLC4A2P04920 1241 aa31.24■■■□□ 2.59
SDF2L1-201ENST00000248958 TRIM28Q13263 835 aaKnown RBP31.24■■■□□ 2.59
SDF2L1-201ENST00000248958 SLC10A5Q5PT55 438 aa31.24■■■□□ 2.59
SDF2L1-201ENST00000248958 CACNA1SQ13698 1873 aa31.23■■■□□ 2.59
SDF2L1-201ENST00000248958 TNRC6CQ9HCJ0 1690 aaKnown RBP31.22■■■□□ 2.59
SDF2L1-201ENST00000248958 ALDH1B1P30837 517 aa31.21■■■□□ 2.59
SDF2L1-201ENST00000248958 CRY2Q49AN0 593 aa31.21■■■□□ 2.59
SDF2L1-201ENST00000248958 TRMT112Q9UI30 125 aaKnown RBP31.21■■■□□ 2.59
SDF2L1-201ENST00000248958 SH3TC1Q8TE82 1336 aa31.21■■■□□ 2.59
SDF2L1-201ENST00000248958 TCERG1O14776 1098 aaKnown RBP31.2■■■□□ 2.59
SDF2L1-201ENST00000248958 KSR2Q6VAB6 950 aa31.2■■■□□ 2.59
SDF2L1-201ENST00000248958 NLRP3Q96P20 1036 aa31.2■■■□□ 2.59
SDF2L1-201ENST00000248958 SLFN5Q08AF3 891 aa31.19■■■□□ 2.58
SDF2L1-201ENST00000248958 SLX4Q8IY92 1834 aa31.19■■■□□ 2.58
SDF2L1-201ENST00000248958 ATP5J2-PTCD1G3V325 749 aa31.18■■■□□ 2.58
SDF2L1-201ENST00000248958 SOGA3Q5TF21 947 aa31.18■■■□□ 2.58
SDF2L1-201ENST00000248958 PRPF40BQ6NWY9 871 aaKnown RBP31.18■■■□□ 2.58
SDF2L1-201ENST00000248958 METTL22Q9BUU2 404 aaPredicted RBP31.18■■■□□ 2.58
SDF2L1-201ENST00000248958 RPGRQ92834 1020 aaKnown RBP31.17■■■□□ 2.58
SDF2L1-201ENST00000248958 MYD88Q99836 296 aa31.17■■■□□ 2.58
SDF2L1-201ENST00000248958 FLIIQ13045 1269 aa31.16■■■□□ 2.58
SDF2L1-201ENST00000248958 MAP3K2Q9Y2U5 619 aa31.16■■■□□ 2.58
SDF2L1-201ENST00000248958 PI4KAP2A4QPH2 592 aa31.15■■■□□ 2.58
SDF2L1-201ENST00000248958 PI4KAP1Q8N8J0 262 aa31.15■■■□□ 2.58
SDF2L1-201ENST00000248958 CCDC191Q8NCU4 936 aa31.15■■■□□ 2.58
SDF2L1-201ENST00000248958 RBM17Q96I25 401 aaKnown RBP31.15■■■□□ 2.58
SDF2L1-201ENST00000248958 SBF1O95248 1867 aa31.14■■■□□ 2.58
SDF2L1-201ENST00000248958 C21orf2O43822 256 aa31.14■■■□□ 2.58
SDF2L1-201ENST00000248958 HOXA10P31260 410 aaPredicted RBP31.14■■■□□ 2.58
SDF2L1-201ENST00000248958 NEXNQ0ZGT2 675 aa31.14■■■□□ 2.58
SDF2L1-201ENST00000248958 G2E3Q7L622 706 aa31.14■■■□□ 2.58
SDF2L1-201ENST00000248958 FER1L6Q2WGJ9 1857 aa31.13■■■□□ 2.57
SDF2L1-201ENST00000248958 ADCY9O60503 1353 aa31.13■■■□□ 2.57
SDF2L1-201ENST00000248958 LAMB2P55268 1798 aa31.12■■■□□ 2.57
SDF2L1-201ENST00000248958 HSP90B1P14625 803 aaKnown RBP31.12■■■□□ 2.57
SDF2L1-201ENST00000248958 FKBP5Q13451 457 aaPredicted RBP31.12■■■□□ 2.57
SDF2L1-201ENST00000248958 CRAMP1Q96RY5 1269 aa31.12■■■□□ 2.57
SDF2L1-201ENST00000248958 DDX60Q8IY21 1712 aaKnown RBP31.11■■■□□ 2.57
SDF2L1-201ENST00000248958 ZBTB38Q8NAP3 1195 aaPredicted RBP31.11■■■□□ 2.57
SDF2L1-201ENST00000248958 ZNF428Q96B54 188 aa31.11■■■□□ 2.57
SDF2L1-201ENST00000248958 CWC25Q9NXE8 425 aaPredicted RBP31.11■■■□□ 2.57
SDF2L1-201ENST00000248958 TRMT2AQ8IZ69 625 aaKnown RBP31.1■■■□□ 2.57
SDF2L1-201ENST00000248958 FAM89AQ96GI7 184 aa31.1■■■□□ 2.57
SDF2L1-201ENST00000248958 HCLS1P14317 486 aaPredicted RBP31.09■■■□□ 2.57
SDF2L1-201ENST00000248958 C7orf43Q8WVR3 580 aa31.09■■■□□ 2.57
SDF2L1-201ENST00000248958 CDCA7LQ96GN5 454 aa31.09■■■□□ 2.57
SDF2L1-201ENST00000248958 ZNF219Q9P2Y4 722 aaPredicted RBP31.09■■■□□ 2.57
SDF2L1-201ENST00000248958 CCDC93Q567U6 631 aa31.08■■■□□ 2.57
SDF2L1-201ENST00000248958 C9orf131Q5VYM1 1079 aa31.08■■■□□ 2.57
SDF2L1-201ENST00000248958 SYNE4Q8N205 404 aa31.08■■■□□ 2.57
SDF2L1-201ENST00000248958 LTBP3Q9NS15 1303 aa31.07■■■□□ 2.56
SDF2L1-201ENST00000248958 PCCAP05165 728 aaPredicted RBP31.07■■■□□ 2.56
SDF2L1-201ENST00000248958 C3orf67Q6ZVT6 689 aa31.07■■■□□ 2.56
SDF2L1-201ENST00000248958 DNAAF4Q8WXU2 420 aa31.07■■■□□ 2.56
SDF2L1-201ENST00000248958 CCDC88AQ3V6T2 1871 aa31.07■■■□□ 2.56
SDF2L1-201ENST00000248958 NFKBIEO00221 500 aa31.06■■■□□ 2.56
SDF2L1-201ENST00000248958 CT47B1P0C2W7 299 aaPredicted RBP31.06■■■□□ 2.56
SDF2L1-201ENST00000248958 LMNB1P20700 586 aa31.06■■■□□ 2.56
SDF2L1-201ENST00000248958 RASSF7Q02833 373 aa31.06■■■□□ 2.56
SDF2L1-201ENST00000248958 CC2D2BQ6DHV5 1058 aa31.06■■■□□ 2.56
SDF2L1-201ENST00000248958 RNF181Q9P0P0 153 aa31.06■■■□□ 2.56
SDF2L1-201ENST00000248958 IRS4O14654 1257 aaPredicted RBP31.05■■■□□ 2.56
SDF2L1-201ENST00000248958 GRIPAP1Q4V328 841 aa31.05■■■□□ 2.56
SDF2L1-201ENST00000248958 RTKN2Q8IZC4 609 aa31.05■■■□□ 2.56
SDF2L1-201ENST00000248958 IGKV5-2P06315 115 aa31.04■■■□□ 2.56
SDF2L1-201ENST00000248958 TAOK3Q9H2K8 898 aa31.04■■■□□ 2.56
SDF2L1-201ENST00000248958 ZC3H4Q9UPT8 1303 aaKnown RBP31.03■■■□□ 2.56
SDF2L1-201ENST00000248958 SF3B3Q15393 1217 aaKnown RBP31.03■■■□□ 2.56
SDF2L1-201ENST00000248958 DDX46Q7L014 1031 aaKnown RBP31.03■■■□□ 2.56
SDF2L1-201ENST00000248958 NEURL1BA8MQ27 555 aa31.02■■■□□ 2.56
SDF2L1-201ENST00000248958 DICER1Q9UPY3 1922 aaKnown RBP31.02■■■□□ 2.56
SDF2L1-201ENST00000248958 CDHR2Q9BYE9 1310 aa31.01■■■□□ 2.56
SDF2L1-201ENST00000248958 PPEF1O14829 653 aaPredicted RBP31.01■■■□□ 2.55
SDF2L1-201ENST00000248958 BBOX1O75936 387 aa31.01■■■□□ 2.55
SDF2L1-201ENST00000248958 HNRNPUQ00839 825 aaKnown RBP eCLIP31.01■■■□□ 2.55
SDF2L1-201ENST00000248958 RTL5Q5HYW3 569 aaPredicted RBP31.01■■■□□ 2.55
SDF2L1-201ENST00000248958 LINS1Q8NG48 757 aa31.01■■■□□ 2.55
SDF2L1-201ENST00000248958 TMX4Q9H1E5 349 aaPredicted RBP31.01■■■□□ 2.55
SDF2L1-201ENST00000248958 ABCC4O15439 1325 aa31■■■□□ 2.55
SDF2L1-201ENST00000248958 ALDH1L2Q3SY69 923 aa31■■■□□ 2.55
SDF2L1-201ENST00000248958 PDE8AO60658 829 aa30.99■■■□□ 2.55
SDF2L1-201ENST00000248958 FKBP4Q02790 459 aaKnown RBP eCLIP30.99■■■□□ 2.55
SDF2L1-201ENST00000248958 CWF19L2Q2TBE0 894 aaKnown RBP30.99■■■□□ 2.55
SDF2L1-201ENST00000248958 GRAPQ13588 217 aa30.98■■■□□ 2.55
SDF2L1-201ENST00000248958 TMC4Q7Z404 712 aa30.98■■■□□ 2.55
SDF2L1-201ENST00000248958 MRPL50Q8N5N7 158 aaKnown RBP30.98■■■□□ 2.55
SDF2L1-201ENST00000248958 GRAPLQ8TC17 118 aaPredicted RBP30.98■■■□□ 2.55
SDF2L1-201ENST00000248958 GPBP1L1Q9HC44 474 aaPredicted RBP30.97■■■□□ 2.55
SDF2L1-201ENST00000248958 PRELPP51888 382 aa30.96■■■□□ 2.55
SDF2L1-201ENST00000248958 GCKRQ14397 625 aa30.96■■■□□ 2.55
SDF2L1-201ENST00000248958 ATP6V0A2Q9Y487 856 aa30.96■■■□□ 2.55
SDF2L1-201ENST00000248958 PTPRCP08575 1304 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms