RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 WDR17Q8IZU2 1322 aa19.03■□□□□ 0.64
LRFN1-201ENST00000248668 KCNJ4P48050 445 aa19.03■□□□□ 0.64
LRFN1-201ENST00000248668 SKOR2Q2VWA4 1001 aaPredicted RBP19.03■□□□□ 0.64
LRFN1-201ENST00000248668 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
LRFN1-201ENST00000248668 GRPEL1Q9HAV7 217 aa19.03■□□□□ 0.64
LRFN1-201ENST00000248668 CASTP20810 708 aaKnown RBP19.03■□□□□ 0.64
LRFN1-201ENST00000248668 FSD1Q9BTV5 496 aa19.03■□□□□ 0.64
LRFN1-201ENST00000248668 TFCP2Q12800 502 aa19.02■□□□□ 0.64
LRFN1-201ENST00000248668 NMIQ13287 307 aaPredicted RBP19.02■□□□□ 0.64
LRFN1-201ENST00000248668 ADCK5Q3MIX3 580 aa19.02■□□□□ 0.64
LRFN1-201ENST00000248668 USP42Q9H9J4 1324 aaKnown RBP19.02■□□□□ 0.64
LRFN1-201ENST00000248668 KAT6BQ8WYB5 2073 aa19.02■□□□□ 0.64
LRFN1-201ENST00000248668 CHGBP05060 677 aa19.02■□□□□ 0.63
LRFN1-201ENST00000248668 RBM27Q9P2N5 1060 aaKnown RBP19.02■□□□□ 0.63
LRFN1-201ENST00000248668 MCM2P49736 904 aa19.01■□□□□ 0.63
LRFN1-201ENST00000248668 LMBRD1Q9NUN5 540 aa19.01■□□□□ 0.63
LRFN1-201ENST00000248668 AK2P54819 239 aa19.01■□□□□ 0.63
LRFN1-201ENST00000248668 EVI5LQ96CN4 794 aa19.01■□□□□ 0.63
LRFN1-201ENST00000248668 CPDO75976 1380 aa19.01■□□□□ 0.63
LRFN1-201ENST00000248668 LMBR1LQ6UX01 489 aa19.01■□□□□ 0.63
LRFN1-201ENST00000248668 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
LRFN1-201ENST00000248668 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
LRFN1-201ENST00000248668 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
LRFN1-201ENST00000248668 COL9A3Q14050 684 aaPredicted RBP19■□□□□ 0.63
LRFN1-201ENST00000248668 RUFY2Q8WXA3 655 aa19■□□□□ 0.63
LRFN1-201ENST00000248668 GDPD2Q9HCC8 539 aa19■□□□□ 0.63
LRFN1-201ENST00000248668 IL2RBP14784 551 aa19■□□□□ 0.63
LRFN1-201ENST00000248668 A0A0D9SFI3 127 aa18.99■□□□□ 0.63
LRFN1-201ENST00000248668 MRE11P49959 708 aa18.99■□□□□ 0.63
LRFN1-201ENST00000248668 PTPN12Q05209 780 aaKnown RBP18.99■□□□□ 0.63
LRFN1-201ENST00000248668 TCEANC2Q96MN5 208 aa18.99■□□□□ 0.63
LRFN1-201ENST00000248668 DNAJC2Q99543 621 aaKnown RBP18.99■□□□□ 0.63
LRFN1-201ENST00000248668 ADAMTS7Q9UKP4 1686 aa18.99■□□□□ 0.63
LRFN1-201ENST00000248668 CUL4AQ13619 759 aa18.99■□□□□ 0.63
LRFN1-201ENST00000248668 KLHL40Q2TBA0 621 aa18.99■□□□□ 0.63
LRFN1-201ENST00000248668 CLEC17AQ6ZS10 378 aa18.99■□□□□ 0.63
LRFN1-201ENST00000248668 CCDC85AQ96PX6 553 aaPredicted RBP18.99■□□□□ 0.63
LRFN1-201ENST00000248668 PLBD2Q8NHP8 589 aa18.98■□□□□ 0.63
LRFN1-201ENST00000248668 DBNLQ9UJU6 430 aaKnown RBP18.98■□□□□ 0.63
LRFN1-201ENST00000248668 NSFL1CQ9UNZ2 370 aaKnown RBP18.98■□□□□ 0.63
LRFN1-201ENST00000248668 LARGE1O95461 756 aa18.98■□□□□ 0.63
LRFN1-201ENST00000248668 RUFY3Q7L099 469 aa18.98■□□□□ 0.63
LRFN1-201ENST00000248668 PTMSP20962 102 aa18.97■□□□□ 0.63
LRFN1-201ENST00000248668 DBNDD2Q9BQY9 259 aa18.97■□□□□ 0.63
LRFN1-201ENST00000248668 RBM8AQ9Y5S9 174 aaKnown RBP18.97■□□□□ 0.63
LRFN1-201ENST00000248668 SOS2Q07890 1332 aaPredicted RBP18.96■□□□□ 0.63
LRFN1-201ENST00000248668 RFX5P48382 616 aaPredicted RBP18.96■□□□□ 0.63
LRFN1-201ENST00000248668 GPT2Q8TD30 523 aa18.96■□□□□ 0.63
LRFN1-201ENST00000248668 ZNF594Q96JF6 807 aaPredicted RBP18.96■□□□□ 0.63
LRFN1-201ENST00000248668 NEUROD6Q96NK8 337 aa18.96■□□□□ 0.63
LRFN1-201ENST00000248668 TAF6LQ9Y6J9 622 aa18.96■□□□□ 0.63
LRFN1-201ENST00000248668 CCDC171Q6TFL3 1326 aa18.96■□□□□ 0.63
LRFN1-201ENST00000248668 TNNI3KQ59H18 835 aa18.96■□□□□ 0.63
LRFN1-201ENST00000248668 ZNF589Q86UQ0 364 aaPredicted RBP18.96■□□□□ 0.63
LRFN1-201ENST00000248668 FPGT-TNNI3KV9GXZ4 949 aa18.96■□□□□ 0.63
LRFN1-201ENST00000248668 CRYBG1Q9Y4K1 1723 aa18.96■□□□□ 0.63
LRFN1-201ENST00000248668 BRD1O95696 1058 aa18.95■□□□□ 0.62
LRFN1-201ENST00000248668 TTC14Q96N46 770 aa18.95■□□□□ 0.62
LRFN1-201ENST00000248668 COL5A2P05997 1499 aaPredicted RBP18.95■□□□□ 0.62
LRFN1-201ENST00000248668 A0A0G2JS52 829 aa18.95■□□□□ 0.62
LRFN1-201ENST00000248668 KDM4FA0A1W2PPD8 638 aa18.95■□□□□ 0.62
LRFN1-201ENST00000248668 CCDC83Q8IWF9 413 aa18.95■□□□□ 0.62
LRFN1-201ENST00000248668 COPRSQ9NQ92 184 aa18.95■□□□□ 0.62
LRFN1-201ENST00000248668 SLFNL1Q499Z3 407 aa18.94■□□□□ 0.62
LRFN1-201ENST00000248668 CCDC129Q6ZRS4 1044 aa18.94■□□□□ 0.62
LRFN1-201ENST00000248668 DDX46Q7L014 1031 aaKnown RBP18.94■□□□□ 0.62
LRFN1-201ENST00000248668 PDRG1Q9NUG6 133 aa18.94■□□□□ 0.62
LRFN1-201ENST00000248668 RBM10P98175 930 aaKnown RBP18.93■□□□□ 0.62
LRFN1-201ENST00000248668 CREB3L3Q68CJ9 461 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 INTS4Q96HW7 963 aaKnown RBP18.93■□□□□ 0.62
LRFN1-201ENST00000248668 SEC62Q99442 399 aaKnown RBP18.93■□□□□ 0.62
LRFN1-201ENST00000248668 CARD10Q9BWT7 1032 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 ASAP1Q9ULH1 1129 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 XIRP1Q702N8 1843 aaKnown RBP18.93■□□□□ 0.62
LRFN1-201ENST00000248668 NECAB1Q8N987 351 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 CWC25Q9NXE8 425 aaPredicted RBP18.93■□□□□ 0.62
LRFN1-201ENST00000248668 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 LIMCH1Q9UPQ0 1083 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 MRC1P22897 1456 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 TIMM10P62072 90 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 ZSCAN23Q3MJ62 389 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 ARID3AQ99856 593 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 TMOD3Q9NYL9 352 aa18.93■□□□□ 0.62
LRFN1-201ENST00000248668 ERVV-2B6SEH9 535 aa18.92■□□□□ 0.62
LRFN1-201ENST00000248668 CASP7P55210 303 aa18.92■□□□□ 0.62
LRFN1-201ENST00000248668 LMTK3Q96Q04 1460 aa18.92■□□□□ 0.62
LRFN1-201ENST00000248668 ZKSCAN1P17029 563 aaPredicted RBP18.92■□□□□ 0.62
LRFN1-201ENST00000248668 SYTL4Q96C24 671 aaPredicted RBP18.92■□□□□ 0.62
LRFN1-201ENST00000248668 RABL6Q3YEC7 729 aaPredicted RBP18.92■□□□□ 0.62
LRFN1-201ENST00000248668 CYP46A1Q9Y6A2 500 aa18.92■□□□□ 0.62
LRFN1-201ENST00000248668 FOXO4P98177 505 aa18.91■□□□□ 0.62
LRFN1-201ENST00000248668 NECTIN1Q15223 517 aa18.91■□□□□ 0.62
LRFN1-201ENST00000248668 LRRC24Q50LG9 513 aa18.91■□□□□ 0.62
LRFN1-201ENST00000248668 RRP9O43818 475 aaKnown RBP18.9■□□□□ 0.62
LRFN1-201ENST00000248668 DNAJC10Q8IXB1 793 aa18.9■□□□□ 0.62
LRFN1-201ENST00000248668 SMC3Q9UQE7 1217 aa18.9■□□□□ 0.62
LRFN1-201ENST00000248668 IL17RAQ96F46 866 aa18.9■□□□□ 0.62
LRFN1-201ENST00000248668 SLC27A2O14975 620 aa18.9■□□□□ 0.62
LRFN1-201ENST00000248668 EPB41L2O43491 1005 aaKnown RBP18.9■□□□□ 0.62
LRFN1-201ENST00000248668 TMEM63CQ9P1W3 806 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms