RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 RGL2O15211 777 aa16.4■□□□□ 0.22
SEM1-201ENST00000248566 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
SEM1-201ENST00000248566 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
SEM1-201ENST00000248566 GIGYF2Q6Y7W6 1299 aaKnown RBP16.4■□□□□ 0.22
SEM1-201ENST00000248566 CNKSR1Q969H4 720 aa16.4■□□□□ 0.22
SEM1-201ENST00000248566 MASTLQ96GX5 879 aa16.4■□□□□ 0.22
SEM1-201ENST00000248566 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
SEM1-201ENST00000248566 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
SEM1-201ENST00000248566 CACNA1SQ13698 1873 aa16.39■□□□□ 0.21
SEM1-201ENST00000248566 SRGNP10124 158 aa16.39■□□□□ 0.21
SEM1-201ENST00000248566 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
SEM1-201ENST00000248566 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
SEM1-201ENST00000248566 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEM1-201ENST00000248566 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
SEM1-201ENST00000248566 STYK1Q6J9G0 422 aa16.38■□□□□ 0.21
SEM1-201ENST00000248566 UBN2Q6ZU65 1347 aa16.37■□□□□ 0.21
SEM1-201ENST00000248566 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
SEM1-201ENST00000248566 NPR1P16066 1061 aa16.37■□□□□ 0.21
SEM1-201ENST00000248566 C1QTNF8P60827 252 aa16.37■□□□□ 0.21
SEM1-201ENST00000248566 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
SEM1-201ENST00000248566 LRP10Q7Z4F1 713 aa16.37■□□□□ 0.21
SEM1-201ENST00000248566 PPP1R42Q7Z4L9 355 aa16.37■□□□□ 0.21
SEM1-201ENST00000248566 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
SEM1-201ENST00000248566 DBF4Q9UBU7 674 aaPredicted RBP16.37■□□□□ 0.21
SEM1-201ENST00000248566 HOXB7P09629 217 aa16.36■□□□□ 0.21
SEM1-201ENST00000248566 ZNF34Q8IZ26 560 aa16.36■□□□□ 0.21
SEM1-201ENST00000248566 LMNB1P20700 586 aa16.35■□□□□ 0.21
SEM1-201ENST00000248566 PARP10Q53GL7 1025 aa16.35■□□□□ 0.21
SEM1-201ENST00000248566 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
SEM1-201ENST00000248566 TSR2Q969E8 191 aaKnown RBP16.35■□□□□ 0.21
SEM1-201ENST00000248566 ABCC12Q96J65 1359 aa16.35■□□□□ 0.21
SEM1-201ENST00000248566 POTEIP0CG38 1075 aa16.34■□□□□ 0.21
SEM1-201ENST00000248566 HSP90AB3PQ58FF7 597 aa16.34■□□□□ 0.21
SEM1-201ENST00000248566 WWC1Q8IX03 1113 aa16.34■□□□□ 0.21
SEM1-201ENST00000248566 C8orf58Q8NAV2 365 aa16.34■□□□□ 0.21
SEM1-201ENST00000248566 UTP14AQ9BVJ6 771 aaKnown RBP16.34■□□□□ 0.21
SEM1-201ENST00000248566 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
SEM1-201ENST00000248566 NFKBIEO00221 500 aa16.33■□□□□ 0.2
SEM1-201ENST00000248566 NTSR2O95665 410 aa16.33■□□□□ 0.2
SEM1-201ENST00000248566 ANKRD13DQ6ZTN6 518 aa16.33■□□□□ 0.2
SEM1-201ENST00000248566 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
SEM1-201ENST00000248566 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
SEM1-201ENST00000248566 SBF1O95248 1867 aa16.33■□□□□ 0.2
SEM1-201ENST00000248566 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
SEM1-201ENST00000248566 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
SEM1-201ENST00000248566 SOGA3Q5TF21 947 aa16.32■□□□□ 0.2
SEM1-201ENST00000248566 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
SEM1-201ENST00000248566 TCERG1O14776 1098 aaKnown RBP16.31■□□□□ 0.2
SEM1-201ENST00000248566 PRELPP51888 382 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 CCDC27Q2M243 656 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 RIC3Q7Z5B4 369 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 PLBD2Q8NHP8 589 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 NLRP3Q96P20 1036 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 TAOK3Q9H2K8 898 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 NMRK2Q9NPI5 230 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 TRMT112Q9UI30 125 aaKnown RBP16.31■□□□□ 0.2
SEM1-201ENST00000248566 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
SEM1-201ENST00000248566 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
SEM1-201ENST00000248566 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
SEM1-201ENST00000248566 GOLGA2Q08379 1002 aa16.3■□□□□ 0.2
SEM1-201ENST00000248566 CCDC93Q567U6 631 aa16.3■□□□□ 0.2
SEM1-201ENST00000248566 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
SEM1-201ENST00000248566 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
SEM1-201ENST00000248566 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
SEM1-201ENST00000248566 TSPYL6Q8N831 410 aa16.3■□□□□ 0.2
SEM1-201ENST00000248566 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
SEM1-201ENST00000248566 ANKRD36CQ5JPF3 1778 aa16.3■□□□□ 0.2
SEM1-201ENST00000248566 ARFGEF2Q9Y6D5 1785 aa16.29■□□□□ 0.2
SEM1-201ENST00000248566 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
SEM1-201ENST00000248566 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
SEM1-201ENST00000248566 KIF3CO14782 793 aa16.28■□□□□ 0.2
SEM1-201ENST00000248566 HCLS1P14317 486 aaPredicted RBP16.28■□□□□ 0.2
SEM1-201ENST00000248566 CLCN6P51797 869 aa16.28■□□□□ 0.2
SEM1-201ENST00000248566 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
SEM1-201ENST00000248566 C3orf67Q6ZVT6 689 aa16.28■□□□□ 0.2
SEM1-201ENST00000248566 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
SEM1-201ENST00000248566 CHMP4AQ9BY43 222 aa16.28■□□□□ 0.2
SEM1-201ENST00000248566 RRAGCQ9HB90 399 aa16.28■□□□□ 0.2
SEM1-201ENST00000248566 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.2
SEM1-201ENST00000248566 TIAM2Q8IVF5 1701 aa16.27■□□□□ 0.2
SEM1-201ENST00000248566 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.2
SEM1-201ENST00000248566 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
SEM1-201ENST00000248566 STK31Q9BXU1 1019 aa16.27■□□□□ 0.2
SEM1-201ENST00000248566 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.19
SEM1-201ENST00000248566 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
SEM1-201ENST00000248566 C7orf43Q8WVR3 580 aa16.26■□□□□ 0.19
SEM1-201ENST00000248566 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
SEM1-201ENST00000248566 IL16Q14005 1332 aa16.26■□□□□ 0.19
SEM1-201ENST00000248566 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
SEM1-201ENST00000248566 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
SEM1-201ENST00000248566 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
SEM1-201ENST00000248566 DPY19L2Q6NUT2 758 aa16.25■□□□□ 0.19
SEM1-201ENST00000248566 FAM89AQ96GI7 184 aa16.25■□□□□ 0.19
SEM1-201ENST00000248566 MYD88Q99836 296 aa16.25■□□□□ 0.19
SEM1-201ENST00000248566 ZNF277Q9NRM2 450 aaPredicted RBP16.25■□□□□ 0.19
SEM1-201ENST00000248566 LTBP3Q9NS15 1303 aa16.25■□□□□ 0.19
SEM1-201ENST00000248566 ZC3H4Q9UPT8 1303 aaKnown RBP16.25■□□□□ 0.19
SEM1-201ENST00000248566 RIC1Q4ADV7 1423 aa16.25■□□□□ 0.19
SEM1-201ENST00000248566 GLTPD2A6NH11 291 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms