RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 FAM177BA6PVY3 158 aa4.41□□□□□ -1.7
PHTF2-201ENST00000248550 PRIM1P49642 420 aaKnown RBP4.41□□□□□ -1.7
PHTF2-201ENST00000248550 KANK4Q5T7N3 995 aaPredicted RBP4.41□□□□□ -1.7
PHTF2-201ENST00000248550 ADARB2Q9NS39 739 aaKnown RBP4.41□□□□□ -1.7
PHTF2-201ENST00000248550 PNMA2Q9UL42 364 aa4.41□□□□□ -1.7
PHTF2-201ENST00000248550 METP08581 1390 aa4.4□□□□□ -1.7
PHTF2-201ENST00000248550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.4□□□□□ -1.7
PHTF2-201ENST00000248550 MS4A1P11836 297 aa4.4□□□□□ -1.7
PHTF2-201ENST00000248550 IRX3P78415 501 aaPredicted RBP4.4□□□□□ -1.7
PHTF2-201ENST00000248550 ZGPATQ8N5A5 531 aaKnown RBP4.4□□□□□ -1.7
PHTF2-201ENST00000248550 ZBED2Q9BTP6 218 aa4.4□□□□□ -1.7
PHTF2-201ENST00000248550 COG6Q9Y2V7 657 aa4.4□□□□□ -1.7
PHTF2-201ENST00000248550 SPATA31A1Q5TZJ5 1347 aa4.4□□□□□ -1.7
PHTF2-201ENST00000248550 GLI3P10071 1580 aa4.4□□□□□ -1.7
PHTF2-201ENST00000248550 PALM3A6NDB9 673 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-201ENST00000248550 ZNF316A6NFI3 1004 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-201ENST00000248550 LBX1P52954 281 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 DLGAP5Q15398 846 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 CAVIN4Q5BKX8 364 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 KRT26Q7Z3Y9 468 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 ZNF804AQ7Z570 1209 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 R3HCC1Q9Y3T6 440 aaKnown RBP4.4□□□□□ -1.71
PHTF2-201ENST00000248550 TRIM17Q9Y577 477 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 ROBO2Q9HCK4 1378 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 WDR17Q8IZU2 1322 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 RAD50Q92878 1312 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 GLTPD2A6NH11 291 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 HLA-DOAP06340 250 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 CNGB1Q14028 1251 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-201ENST00000248550 ODR4Q5SWX8 454 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 NECAB2Q7Z6G3 386 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 CRACR2BQ8N4Y2 399 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-201ENST00000248550 CCER1Q8TC90 406 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-201ENST00000248550 RGS17Q9UGC6 210 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-201ENST00000248550 FAM161AQ3B820 660 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 NECTIN2Q92692 538 aa4.4□□□□□ -1.71
PHTF2-201ENST00000248550 TMEM265A0A087WTH1 108 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 MAP3K13O43283 966 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 GSTO1P78417 241 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 ARRDC4Q8NCT1 418 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 DCAF5Q96JK2 942 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 USP31Q70CQ4 1352 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 TRIM21P19474 475 aaKnown RBP4.39□□□□□ -1.71
PHTF2-201ENST00000248550 TAF1CQ15572 869 aaPredicted RBP4.39□□□□□ -1.71
PHTF2-201ENST00000248550 CNTROBQ8N137 903 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 CCDC24Q8N4L8 307 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 DNAJC2Q99543 621 aaKnown RBP4.39□□□□□ -1.71
PHTF2-201ENST00000248550 ANP32EQ9BTT0 268 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 SLIT3O75094 1523 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 KCNJ6P48051 423 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 FOXK2Q01167 660 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 MYD88Q99836 296 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 CTNNA3Q9UI47 895 aa4.39□□□□□ -1.71
PHTF2-201ENST00000248550 NSD2O96028 1365 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 IKQ13123 557 aaPredicted RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 FBXO46Q6PJ61 603 aaPredicted RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 RIC3Q7Z5B4 369 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 ZC3H15Q8WU90 426 aaKnown RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 STK24Q9Y6E0 443 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 ALS2Q96Q42 1657 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 C10orf71Q711Q0 1435 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 TTC21BQ7Z4L5 1316 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 WDR33Q9C0J8 1336 aaKnown RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 PARP4Q9UKK3 1724 aaKnown RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 RPS6KA4O75676 772 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 C1QBPQ07021 282 aaKnown RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 RTL5Q5HYW3 569 aaPredicted RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 RGMBQ6NW40 437 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 PARK7Q99497 189 aaKnown RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 BCL9LQ86UU0 1499 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 NRAPQ86VF7 1730 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 CARNS1A5YM72 827 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 ERVV-2B6SEH9 535 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 SERPINB2P05120 415 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 STYK1Q6J9G0 422 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 KIF2CQ99661 725 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 UBE2OQ9C0C9 1292 aaKnown RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 USP54Q70EL1 1684 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 PLEKHH1Q9ULM0 1364 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 TCERG1O14776 1098 aaKnown RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 PTCD1O75127 700 aaKnown RBP4.38□□□□□ -1.71
PHTF2-201ENST00000248550 GPATCH3Q96I76 525 aa4.38□□□□□ -1.71
PHTF2-201ENST00000248550 FSD2A1L4K1 749 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 BBOX1O75936 387 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 COPB2P35606 906 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 RAB30Q15771 203 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 PTPROQ16827 1216 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 RC3H1Q5TC82 1133 aaKnown RBP4.37□□□□□ -1.71
PHTF2-201ENST00000248550 FASTKD5Q7L8L6 764 aaKnown RBP4.37□□□□□ -1.71
PHTF2-201ENST00000248550 CCDC43Q96MW1 224 aaKnown RBP4.37□□□□□ -1.71
PHTF2-201ENST00000248550 MFSD1Q9H3U5 465 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 TNS2Q63HR2 1409 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 NUTM1Q86Y26 1132 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 SAGE1Q9NXZ1 904 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 LAS1LQ9Y4W2 734 aaKnown RBP4.37□□□□□ -1.71
PHTF2-201ENST00000248550 QSER1Q2KHR3 1735 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 MSCO60682 206 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 CETPP11597 493 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 CA8P35219 290 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 CERS3Q8IU89 383 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms