RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
NCLN-201ENST00000246117 JAK2O60674 1132 aa16.11■□□□□ 0.17
NCLN-201ENST00000246117 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
NCLN-201ENST00000246117 ZNF396Q96N95 335 aaPredicted RBP16.11■□□□□ 0.17
NCLN-201ENST00000246117 CFAP45Q9UL16 551 aa16.11■□□□□ 0.17
NCLN-201ENST00000246117 IQGAP3Q86VI3 1631 aa16.11■□□□□ 0.17
NCLN-201ENST00000246117 FSD2A1L4K1 749 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 GOLGA8BA8MQT2 603 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 AKAP4Q5JQC9 854 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 KIF2CQ99661 725 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 SCAND2PQ9GZW5 306 aaPredicted RBP16.1■□□□□ 0.17
NCLN-201ENST00000246117 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 A0A087WWV3 80 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 MINDY4BA8MYZ0 360 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 ANAPC15P60006 121 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 CCDC112Q8NEF3 446 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 RNMTO43148 476 aaKnown RBP16.1■□□□□ 0.17
NCLN-201ENST00000246117 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 KRT32Q14532 448 aa16.1■□□□□ 0.17
NCLN-201ENST00000246117 EAF2Q96CJ1 260 aaPredicted RBP16.09■□□□□ 0.17
NCLN-201ENST00000246117 TLR7Q9NYK1 1049 aaKnown RBP16.09■□□□□ 0.17
NCLN-201ENST00000246117 EIF4A1P60842 406 aaKnown RBP16.09■□□□□ 0.17
NCLN-201ENST00000246117 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
NCLN-201ENST00000246117 SKIDA1Q1XH10 827 aa16.09■□□□□ 0.17
NCLN-201ENST00000246117 KLHL10Q6JEL2 608 aa16.09■□□□□ 0.17
NCLN-201ENST00000246117 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
NCLN-201ENST00000246117 C8orf76Q96K31 380 aa16.09■□□□□ 0.17
NCLN-201ENST00000246117 PTGS1P23219 599 aa16.09■□□□□ 0.17
NCLN-201ENST00000246117 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
NCLN-201ENST00000246117 VPS53Q5VIR6 699 aa16.09■□□□□ 0.17
NCLN-201ENST00000246117 MNS1Q8NEH6 495 aa16.09■□□□□ 0.17
NCLN-201ENST00000246117 PCMTD1Q96MG8 357 aaPredicted RBP16.09■□□□□ 0.17
NCLN-201ENST00000246117 NAT10Q9H0A0 1025 aaKnown RBP16.09■□□□□ 0.17
NCLN-201ENST00000246117 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
NCLN-201ENST00000246117 MYOM2P54296 1465 aa16.08■□□□□ 0.17
NCLN-201ENST00000246117 MARCKSP29966 332 aaPredicted RBP16.08■□□□□ 0.17
NCLN-201ENST00000246117 TDO2P48775 406 aa16.08■□□□□ 0.17
NCLN-201ENST00000246117 LDHAL6AQ6ZMR3 332 aa16.08■□□□□ 0.17
NCLN-201ENST00000246117 USP16Q9Y5T5 823 aa16.08■□□□□ 0.17
NCLN-201ENST00000246117 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.16
NCLN-201ENST00000246117 HSPA2P54652 639 aa16.08■□□□□ 0.16
NCLN-201ENST00000246117 CDC37L1Q7L3B6 337 aa16.08■□□□□ 0.16
NCLN-201ENST00000246117 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
NCLN-201ENST00000246117 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.16
NCLN-201ENST00000246117 ZHX1Q9UKY1 873 aaPredicted RBP16.08■□□□□ 0.16
NCLN-201ENST00000246117 CCDC171Q6TFL3 1326 aa16.08■□□□□ 0.16
NCLN-201ENST00000246117 SNRPA1P09661 255 aaKnown RBP16.08■□□□□ 0.16
NCLN-201ENST00000246117 IP6K1Q92551 441 aa16.08■□□□□ 0.16
NCLN-201ENST00000246117 MADDQ8WXG6 1647 aa16.08■□□□□ 0.16
NCLN-201ENST00000246117 A1BGP04217 495 aa16.07■□□□□ 0.16
NCLN-201ENST00000246117 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
NCLN-201ENST00000246117 CEP57L1Q8IYX8 460 aa16.07■□□□□ 0.16
NCLN-201ENST00000246117 MARCH6O60337 910 aa16.07■□□□□ 0.16
NCLN-201ENST00000246117 CCDC34Q96HJ3 373 aa16.07■□□□□ 0.16
NCLN-201ENST00000246117 E9PCH4 1651 aa16.07■□□□□ 0.16
NCLN-201ENST00000246117 CLSTN1O94985 981 aa16.07■□□□□ 0.16
NCLN-201ENST00000246117 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
NCLN-201ENST00000246117 A0A0D9SFI3 127 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 BRD1O95696 1058 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 TNNT1P13805 278 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 IFIT5Q13325 482 aaKnown RBP16.06■□□□□ 0.16
NCLN-201ENST00000246117 ME3Q16798 604 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 SLFNL1Q499Z3 407 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
NCLN-201ENST00000246117 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 PKNOX2Q96KN3 472 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 ZMYND15Q9H091 742 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 LRP2BPQ9P2M1 347 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 LARGE1O95461 756 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 RUFY3Q7L099 469 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 SBNO1A3KN83 1393 aa16.06■□□□□ 0.16
NCLN-201ENST00000246117 RAD50Q92878 1312 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 PDCL2Q8N4E4 241 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 FAM89AQ96GI7 184 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 MAP3K4Q9Y6R4 1608 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 ADAMTS2O95450 1211 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 HSPA4P34932 840 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 TYRO3Q06418 890 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
NCLN-201ENST00000246117 KLF18A0A0U1RQI7 1052 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 ZNF790Q6PG37 636 aa16.05■□□□□ 0.16
NCLN-201ENST00000246117 ZNF213O14771 459 aa16.04■□□□□ 0.16
NCLN-201ENST00000246117 TPM3P06753 285 aa16.04■□□□□ 0.16
NCLN-201ENST00000246117 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
NCLN-201ENST00000246117 SLC27A2O14975 620 aa16.04■□□□□ 0.16
NCLN-201ENST00000246117 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
NCLN-201ENST00000246117 RAI14Q9P0K7 980 aa16.04■□□□□ 0.16
NCLN-201ENST00000246117 ZNF445P59923 1031 aa16.04■□□□□ 0.16
NCLN-201ENST00000246117 SSH3Q8TE77 659 aa16.04■□□□□ 0.16
NCLN-201ENST00000246117 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
NCLN-201ENST00000246117 OFD1O75665 1012 aa16.03■□□□□ 0.16
NCLN-201ENST00000246117 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
NCLN-201ENST00000246117 CPLX3Q8WVH0 158 aa16.03■□□□□ 0.16
NCLN-201ENST00000246117 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■■■■□ 23.9
NCLN-201ENST00000246117 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
NCLN-201ENST00000246117 KIF1BO60333 1816 aa16.03■□□□□ 0.16
NCLN-201ENST00000246117 FAM135BQ49AJ0 1406 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms