RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 GOLGA8AA7E2F4 631 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 SPAG1Q07617 926 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 GPATCH11Q8N954 259 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 POGZQ7Z3K3 1410 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 TBCAO75347 108 aaKnown RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 ZSCAN23Q3MJ62 389 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC121Q6ZUS5 278 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 TTC12Q9H892 705 aaPredicted RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 EXOC1Q9NV70 894 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 ANKIB1Q9P2G1 1089 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 RANBP6O60518 1105 aaKnown RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 KIF4AO95239 1232 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 KIAA0753Q2KHM9 967 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 TXNDC2Q86VQ3 553 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 EIF2AK4Q9P2K8 1649 aaKnown RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 USP37Q86T82 979 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 RARSP54136 660 aaKnown RBP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 N4BP3O15049 544 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 EVI5LQ96CN4 794 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 ZSCAN16Q9H4T2 348 aaPredicted RBP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 PROSER2Q86WR7 435 aaPredicted RBP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC77Q9BR77 488 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 CTAGE15A4D2H0 777 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 CTAGE8P0CG41 777 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 CTAGE6Q86UF2 777 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 CTAGE4Q8IX94 777 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 ABCF2Q9UG63 623 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 GUCY1B3Q02153 619 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 SPTY2D1Q68D10 685 aaPredicted RBP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 SMC6Q96SB8 1091 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 DDX23Q9BUQ8 820 aaKnown RBP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 TBC1D9Q6ZT07 1266 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 FERMT2Q96AC1 680 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 AQRO60306 1485 aaKnown RBP eCLIP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 BIN1O00499 593 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 GJB2P29033 226 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 NOP2P46087 812 aaKnown RBP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 TRIM47Q96LD4 638 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 GTPBP4Q9BZE4 634 aaKnown RBP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 TMCO5BA8MYB1 307 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 RRS1Q15050 365 aaKnown RBP7.72□□□□□ -1.17
CSMD2-201ENST00000241312 TBC1D32Q96NH3 1257 aa7.72□□□□□ -1.17
CSMD2-201ENST00000241312 SETD1BQ9UPS6 1966 aaKnown RBP7.71□□□□□ -1.17
CSMD2-201ENST00000241312 SKILP12757 684 aa7.71□□□□□ -1.17
CSMD2-201ENST00000241312 HS1BP3Q53T59 392 aa7.71□□□□□ -1.17
CSMD2-201ENST00000241312 BAG4O95429 457 aaKnown RBP7.71□□□□□ -1.17
CSMD2-201ENST00000241312 GTF2A1P52655 376 aaPredicted RBP7.71□□□□□ -1.17
CSMD2-201ENST00000241312 MKNK2Q9HBH9 465 aa7.71□□□□□ -1.17
CSMD2-201ENST00000241312 PPFIA3O75145 1194 aa7.71□□□□□ -1.17
CSMD2-201ENST00000241312 PIP4K2BP78356 416 aa7.71□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC6Q16204 474 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 KCNG4Q8TDN1 519 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 ECHDC1Q9NTX5 307 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 PRG4Q92954 1404 aaPredicted RBP7.71□□□□□ -1.18
CSMD2-201ENST00000241312 UBA7P41226 1012 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 TTC21BQ7Z4L5 1316 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 SYNCQ9H7C4 482 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 ANAPC4Q9UJX5 808 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 ATP2A1O14983 1001 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 SYKP43405 635 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 PDE4BQ07343 736 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 AMOTQ4VCS5 1084 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.71□□□□□ -1.18
CSMD2-201ENST00000241312 V9GYY5 206 aaPredicted RBP7.71□□□□□ -1.18
CSMD2-201ENST00000241312 MINDY4BA8MYZ0 360 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 HCLS1P14317 486 aaPredicted RBP7.71□□□□□ -1.18
CSMD2-201ENST00000241312 GOLGA1Q92805 767 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 PIK3R4Q99570 1358 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 CC2D2AQ9P2K1 1620 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 TUBBP07437 444 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 TTC22Q5TAA0 569 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 LRRC45Q96CN5 670 aa7.71□□□□□ -1.18
CSMD2-201ENST00000241312 ZNF830Q96NB3 372 aaPredicted RBP7.71□□□□□ -1.18
CSMD2-201ENST00000241312 DAAM2Q86T65 1068 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 SYCP3Q8IZU3 236 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 SELENOOQ9BVL4 669 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 RSPH14Q9UHP6 348 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 SSX2IPQ9Y2D8 614 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 THEMISQ8N1K5 641 aaPredicted RBP7.7□□□□□ -1.18
CSMD2-201ENST00000241312 MYO1BO43795 1136 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 TRIM27P14373 513 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 CYLC1P35663 651 aaPredicted RBP7.7□□□□□ -1.18
CSMD2-201ENST00000241312 TCERG1LQ5VWI1 586 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 MICU3Q86XE3 530 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 CPLX3Q8WVH0 158 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 MFSD6Q6ZSS7 791 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 KCNH5Q8NCM2 988 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 BOLA2Q9H3K6 86 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 MXRA7P84157 204 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 DDX46Q7L014 1031 aaKnown RBP7.7□□□□□ -1.18
CSMD2-201ENST00000241312 IFIT3O14879 490 aaKnown RBP7.7□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC174Q6PII3 467 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 RAB3IL1Q8TBN0 382 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 SPAG5Q96R06 1193 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 ZPR1O75312 459 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 TACC1O75410 805 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 EBAG9O00559 213 aa7.7□□□□□ -1.18
CSMD2-201ENST00000241312 METAP2P50579 478 aaKnown RBP eCLIP7.7□□□□□ -1.18
CSMD2-201ENST00000241312 JAKMIP2Q96AA8 810 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms