RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 RLBP1P12271 317 aa13.79□□□□□ -0.2
TNFAIP3-201ENST00000237289 HCLS1P14317 486 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-201ENST00000237289 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
TNFAIP3-201ENST00000237289 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
TNFAIP3-201ENST00000237289 COL23A1Q86Y22 540 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-201ENST00000237289 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
TNFAIP3-201ENST00000237289 FRAT2O75474 233 aaPredicted RBP13.78□□□□□ -0.2
TNFAIP3-201ENST00000237289 CAMTA2O94983 1202 aa13.78□□□□□ -0.2
TNFAIP3-201ENST00000237289 LMBR1LQ6UX01 489 aa13.78□□□□□ -0.2
TNFAIP3-201ENST00000237289 NLRP10Q86W26 655 aa13.78□□□□□ -0.2
TNFAIP3-201ENST00000237289 ZBTB38Q8NAP3 1195 aaPredicted RBP13.78□□□□□ -0.2
TNFAIP3-201ENST00000237289 SIL1Q9H173 461 aa13.78□□□□□ -0.2
TNFAIP3-201ENST00000237289 PDE8AO60658 829 aa13.77□□□□□ -0.2
TNFAIP3-201ENST00000237289 TBC1D9BQ66K14 1250 aa13.77□□□□□ -0.2
TNFAIP3-201ENST00000237289 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.2
TNFAIP3-201ENST00000237289 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
TNFAIP3-201ENST00000237289 MRC1P22897 1456 aa13.77□□□□□ -0.21
TNFAIP3-201ENST00000237289 PCCAP05165 728 aaPredicted RBP13.77□□□□□ -0.21
TNFAIP3-201ENST00000237289 PROM2Q8N271 834 aa13.77□□□□□ -0.21
TNFAIP3-201ENST00000237289 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 GPATCH3Q96I76 525 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 H0YIN7 160 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 PDE6BP35913 854 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 ABCC4O15439 1325 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 DLG5Q8TDM6 1919 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 NFIXQ14938 502 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 SPON1Q9HCB6 807 aa13.76□□□□□ -0.21
TNFAIP3-201ENST00000237289 SUSD4Q5VX71 490 aa13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 NBPF7P0C2Y1 421 aaPredicted RBP13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 LDHAL6AQ6ZMR3 332 aa13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 NEUROD6Q96NK8 337 aa13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
TNFAIP3-201ENST00000237289 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
TNFAIP3-201ENST00000237289 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
TNFAIP3-201ENST00000237289 RGS3P49796 1198 aa13.74□□□□□ -0.21
TNFAIP3-201ENST00000237289 DOT1LQ8TEK3 1739 aa13.74□□□□□ -0.21
TNFAIP3-201ENST00000237289 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
TNFAIP3-201ENST00000237289 GYS1P13807 737 aa13.74□□□□□ -0.21
TNFAIP3-201ENST00000237289 ILDR2Q71H61 639 aa13.74□□□□□ -0.21
TNFAIP3-201ENST00000237289 ISCA1Q9BUE6 129 aa13.74□□□□□ -0.21
TNFAIP3-201ENST00000237289 ZBTB7BO15156 539 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 CLASRPQ8N2M8 674 aaKnown RBP13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 ANO8Q9HCE9 1232 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 ANKIB1Q9P2G1 1089 aa13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 TRIM28Q13263 835 aaKnown RBP13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 ERFEQ4G0M1 354 aa13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 METTL24Q5JXM2 366 aa13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 MTFR1LQ9H019 292 aa13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 ADCY9O60503 1353 aa13.73□□□□□ -0.21
TNFAIP3-201ENST00000237289 RNF123Q5XPI4 1314 aa13.72□□□□□ -0.21
TNFAIP3-201ENST00000237289 SCN11AQ9UI33 1791 aa13.72□□□□□ -0.21
TNFAIP3-201ENST00000237289 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
TNFAIP3-201ENST00000237289 SUCLG2Q96I99 432 aa13.72□□□□□ -0.21
TNFAIP3-201ENST00000237289 CENPQQ7L2Z9 268 aaPredicted RBP13.72□□□□□ -0.21
TNFAIP3-201ENST00000237289 WWC3Q9ULE0 1092 aa13.72□□□□□ -0.21
TNFAIP3-201ENST00000237289 C2CD5Q86YS7 1000 aa13.72□□□□□ -0.21
TNFAIP3-201ENST00000237289 ZNF34Q8IZ26 560 aa13.72□□□□□ -0.21
TNFAIP3-201ENST00000237289 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
TNFAIP3-201ENST00000237289 ALDH1B1P30837 517 aa13.71□□□□□ -0.21
TNFAIP3-201ENST00000237289 ATP8B2P98198 1209 aa13.71□□□□□ -0.21
TNFAIP3-201ENST00000237289 ZBTB40Q9NUA8 1239 aa13.71□□□□□ -0.21
TNFAIP3-201ENST00000237289 CTSWP56202 376 aa13.71□□□□□ -0.22
TNFAIP3-201ENST00000237289 PNPLA7Q6ZV29 1317 aa13.71□□□□□ -0.22
TNFAIP3-201ENST00000237289 ITGA6P23229 1130 aa13.7□□□□□ -0.22
TNFAIP3-201ENST00000237289 EXOC6BQ9Y2D4 811 aa13.7□□□□□ -0.22
TNFAIP3-201ENST00000237289 H7C1W4 665 aa13.7□□□□□ -0.22
TNFAIP3-201ENST00000237289 KCPQ6ZWJ8 1503 aa13.69□□□□□ -0.22
TNFAIP3-201ENST00000237289 RGL2O15211 777 aa13.69□□□□□ -0.22
TNFAIP3-201ENST00000237289 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
TNFAIP3-201ENST00000237289 LRRCC1Q9C099 1032 aa13.69□□□□□ -0.22
TNFAIP3-201ENST00000237289 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
TNFAIP3-201ENST00000237289 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
TNFAIP3-201ENST00000237289 C6orf229H3BNL8 230 aa13.69□□□□□ -0.22
TNFAIP3-201ENST00000237289 AKAP2Q9Y2D5 859 aa13.69□□□□□ -0.22
TNFAIP3-201ENST00000237289 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
TNFAIP3-201ENST00000237289 RAB11FIP3O75154 756 aa13.68□□□□□ -0.22
TNFAIP3-201ENST00000237289 FAM161AQ3B820 660 aa13.68□□□□□ -0.22
TNFAIP3-201ENST00000237289 KIF1BPQ96EK5 621 aa13.68□□□□□ -0.22
TNFAIP3-201ENST00000237289 IFIT1P09914 478 aaKnown RBP13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 GNL3LQ9NVN8 582 aaKnown RBP13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 RPS8P62241 208 aaKnown RBP13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 BRIP1Q9BX63 1249 aa13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 PRR5LQ6MZQ0 368 aa13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 SYNE4Q8N205 404 aa13.67□□□□□ -0.22
TNFAIP3-201ENST00000237289 CCDC158Q5M9N0 1113 aa13.66□□□□□ -0.22
TNFAIP3-201ENST00000237289 IL15P40933 162 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP3-201ENST00000237289 CASC1Q6TDU7 716 aa13.66□□□□□ -0.22
TNFAIP3-201ENST00000237289 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms