RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
HMGCL-201ENST00000235958 SPON1Q9HCB6 807 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-201ENST00000235958 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
HMGCL-201ENST00000235958 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 ABCC4O15439 1325 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 RNF123Q5XPI4 1314 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 NBPF5PQ86XG9 351 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-201ENST00000235958 JARID2Q92833 1246 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-201ENST00000235958 BCORQ6W2J9 1755 aa12.86□□□□□ -0.35
HMGCL-201ENST00000235958 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
HMGCL-201ENST00000235958 H7C1W4 665 aa12.85□□□□□ -0.35
HMGCL-201ENST00000235958 POLD1P28340 1107 aa12.85□□□□□ -0.35
HMGCL-201ENST00000235958 GTF2E1P29083 439 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-201ENST00000235958 PTGER2P43116 358 aa12.85□□□□□ -0.35
HMGCL-201ENST00000235958 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-201ENST00000235958 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
HMGCL-201ENST00000235958 FAM89AQ96GI7 184 aa12.85□□□□□ -0.35
HMGCL-201ENST00000235958 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
HMGCL-201ENST00000235958 NYXQ9GZU5 481 aa12.85□□□□□ -0.35
HMGCL-201ENST00000235958 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
HMGCL-201ENST00000235958 C9orf78Q9NZ63 289 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-201ENST00000235958 CARMIL3Q8ND23 1372 aa12.84□□□□□ -0.35
HMGCL-201ENST00000235958 SCN7AQ01118 1682 aa12.84□□□□□ -0.35
HMGCL-201ENST00000235958 NPHP1O15259 732 aa12.84□□□□□ -0.35
HMGCL-201ENST00000235958 NTSR2O95665 410 aa12.84□□□□□ -0.35
HMGCL-201ENST00000235958 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
HMGCL-201ENST00000235958 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
HMGCL-201ENST00000235958 ZBTB38Q8NAP3 1195 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-201ENST00000235958 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
HMGCL-201ENST00000235958 GRM8O00222 908 aa12.83□□□□□ -0.36
HMGCL-201ENST00000235958 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
HMGCL-201ENST00000235958 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
HMGCL-201ENST00000235958 NBPF7P0C2Y1 421 aaPredicted RBP12.83□□□□□ -0.36
HMGCL-201ENST00000235958 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
HMGCL-201ENST00000235958 PRR5LQ6MZQ0 368 aa12.83□□□□□ -0.36
HMGCL-201ENST00000235958 UBE3BQ7Z3V4 1068 aa12.83□□□□□ -0.36
HMGCL-201ENST00000235958 ITPRIPQ8IWB1 547 aa12.83□□□□□ -0.36
HMGCL-201ENST00000235958 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
HMGCL-201ENST00000235958 ANKRD36CQ5JPF3 1778 aa12.83□□□□□ -0.36
HMGCL-201ENST00000235958 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
HMGCL-201ENST00000235958 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
HMGCL-201ENST00000235958 CASP7P55210 303 aa12.82□□□□□ -0.36
HMGCL-201ENST00000235958 AFDNP55196 1824 aaKnown RBP12.82□□□□□ -0.36
HMGCL-201ENST00000235958 IRS4O14654 1257 aaPredicted RBP12.81□□□□□ -0.36
HMGCL-201ENST00000235958 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
HMGCL-201ENST00000235958 MEIS3Q99687 375 aa12.81□□□□□ -0.36
HMGCL-201ENST00000235958 BRIP1Q9BX63 1249 aa12.81□□□□□ -0.36
HMGCL-201ENST00000235958 UTYO14607 1347 aa12.81□□□□□ -0.36
HMGCL-201ENST00000235958 COL24A1Q17RW2 1714 aa12.8□□□□□ -0.36
HMGCL-201ENST00000235958 GNAI3P08754 354 aa12.8□□□□□ -0.36
HMGCL-201ENST00000235958 ST5P78524 1137 aa12.8□□□□□ -0.36
HMGCL-201ENST00000235958 IBTKQ9P2D0 1353 aaPredicted RBP12.8□□□□□ -0.36
HMGCL-201ENST00000235958 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
HMGCL-201ENST00000235958 UBTFL1P0CB47 393 aaPredicted RBP12.79□□□□□ -0.36
HMGCL-201ENST00000235958 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
HMGCL-201ENST00000235958 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
HMGCL-201ENST00000235958 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
HMGCL-201ENST00000235958 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-201ENST00000235958 PDE8AO60658 829 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 HSP90B1P14625 803 aaKnown RBP12.78□□□□□ -0.36
HMGCL-201ENST00000235958 IRX6P78412 446 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-201ENST00000235958 FOXO4P98177 505 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 EPHA10Q5JZY3 1008 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 C3orf67Q6ZVT6 689 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 SUCLG2Q96I99 432 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 ZBTB40Q9NUA8 1239 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-201ENST00000235958 HDAC5Q9UQL6 1122 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
HMGCL-201ENST00000235958 PDE6BP35913 854 aa12.77□□□□□ -0.37
HMGCL-201ENST00000235958 TTLL11Q8NHH1 800 aa12.77□□□□□ -0.37
HMGCL-201ENST00000235958 PLA2G12BQ9BX93 195 aa12.77□□□□□ -0.37
HMGCL-201ENST00000235958 CHMP4BQ9H444 224 aaKnown RBP12.77□□□□□ -0.37
HMGCL-201ENST00000235958 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
HMGCL-201ENST00000235958 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
HMGCL-201ENST00000235958 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
HMGCL-201ENST00000235958 H0YIN7 160 aa12.76□□□□□ -0.37
HMGCL-201ENST00000235958 GNAI2P04899 355 aa12.76□□□□□ -0.37
HMGCL-201ENST00000235958 CSF1RP07333 972 aa12.76□□□□□ -0.37
HMGCL-201ENST00000235958 SF3B3Q15393 1217 aaKnown RBP12.76□□□□□ -0.37
HMGCL-201ENST00000235958 LMBR1LQ6UX01 489 aa12.76□□□□□ -0.37
HMGCL-201ENST00000235958 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
HMGCL-201ENST00000235958 LRRFIP2Q9Y608 721 aaKnown RBP12.76□□□□□ -0.37
HMGCL-201ENST00000235958 ABCC12Q96J65 1359 aa12.76□□□□□ -0.37
HMGCL-201ENST00000235958 CTSWP56202 376 aa12.75□□□□□ -0.37
HMGCL-201ENST00000235958 TGFB2P61812 414 aa12.75□□□□□ -0.37
HMGCL-201ENST00000235958 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
HMGCL-201ENST00000235958 EXOC6Q8TAG9 804 aa12.75□□□□□ -0.37
HMGCL-201ENST00000235958 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
HMGCL-201ENST00000235958 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
HMGCL-201ENST00000235958 BICC1Q9H694 974 aaKnown RBP12.75□□□□□ -0.37
HMGCL-201ENST00000235958 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
HMGCL-201ENST00000235958 SRGNP10124 158 aa12.74□□□□□ -0.37
HMGCL-201ENST00000235958 DPEP1P16444 411 aa12.74□□□□□ -0.37
HMGCL-201ENST00000235958 KCNA3P22001 575 aa12.74□□□□□ -0.37
HMGCL-201ENST00000235958 CHRNA5P30532 468 aa12.74□□□□□ -0.37
HMGCL-201ENST00000235958 CRY2Q49AN0 593 aa12.74□□□□□ -0.37
HMGCL-201ENST00000235958 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms