RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CARMIL3Q8ND23 1372 aa14.49□□□□□ -0.09
SF3B6-201ENST00000233468 MAP3K15Q6ZN16 1313 aa14.49□□□□□ -0.09
SF3B6-201ENST00000233468 NPHP1O15259 732 aa14.49□□□□□ -0.09
SF3B6-201ENST00000233468 SERPINB2P05120 415 aa14.49□□□□□ -0.09
SF3B6-201ENST00000233468 PDIA6Q15084 440 aa14.49□□□□□ -0.09
SF3B6-201ENST00000233468 HSP90AB3PQ58FF7 597 aa14.49□□□□□ -0.09
SF3B6-201ENST00000233468 BICDL1Q6ZP65 573 aa14.49□□□□□ -0.09
SF3B6-201ENST00000233468 CHPF2Q9P2E5 772 aa14.49□□□□□ -0.09
SF3B6-201ENST00000233468 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
SF3B6-201ENST00000233468 TNRC6CQ9HCJ0 1690 aaKnown RBP14.48□□□□□ -0.09
SF3B6-201ENST00000233468 CACNA1SQ13698 1873 aa14.47□□□□□ -0.09
SF3B6-201ENST00000233468 DDX58O95786 925 aaKnown RBP14.47□□□□□ -0.09
SF3B6-201ENST00000233468 HNRNPUQ00839 825 aaKnown RBP eCLIP14.47□□□□□ -0.09
SF3B6-201ENST00000233468 EXOSC9Q06265 439 aaKnown RBP14.47□□□□□ -0.09
SF3B6-201ENST00000233468 COPS6Q7L5N1 327 aa14.47□□□□□ -0.09
SF3B6-201ENST00000233468 CCDC24Q8N4L8 307 aa14.47□□□□□ -0.09
SF3B6-201ENST00000233468 RBM46Q8TBY0 533 aaKnown RBP14.47□□□□□ -0.09
SF3B6-201ENST00000233468 SLFN5Q08AF3 891 aa14.46□□□□□ -0.09
SF3B6-201ENST00000233468 AIMP1Q12904 312 aaKnown RBP14.46□□□□□ -0.09
SF3B6-201ENST00000233468 PROSER3Q2NL68 480 aa14.46□□□□□ -0.09
SF3B6-201ENST00000233468 TBC1D9BQ66K14 1250 aa14.46□□□□□ -0.09
SF3B6-201ENST00000233468 TTLL7Q6ZT98 887 aa14.46□□□□□ -0.09
SF3B6-201ENST00000233468 C16orf71Q8IYS4 520 aaPredicted RBP14.46□□□□□ -0.09
SF3B6-201ENST00000233468 TSPYL6Q8N831 410 aa14.46□□□□□ -0.09
SF3B6-201ENST00000233468 XAGE3Q8WTP9 111 aa14.46□□□□□ -0.09
SF3B6-201ENST00000233468 NIP7Q9Y221 180 aaKnown RBP eCLIP14.46□□□□□ -0.09
SF3B6-201ENST00000233468 TIAM2Q8IVF5 1701 aa14.46□□□□□ -0.1
SF3B6-201ENST00000233468 ANXA1P04083 346 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 COL11A2P13942 1736 aaPredicted RBP14.45□□□□□ -0.1
SF3B6-201ENST00000233468 ST5P78524 1137 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 TPTE2Q6XPS3 522 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 GIGYF2Q6Y7W6 1299 aaKnown RBP14.45□□□□□ -0.1
SF3B6-201ENST00000233468 ANKRD13DQ6ZTN6 518 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 LRP10Q7Z4F1 713 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 C2CD5Q86YS7 1000 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 ZNF428Q96B54 188 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 NYXQ9GZU5 481 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 ZBTB3Q9H5J0 574 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 PDZRN3Q9UPQ7 1066 aa14.45□□□□□ -0.1
SF3B6-201ENST00000233468 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
SF3B6-201ENST00000233468 VAMP4O75379 141 aa14.44□□□□□ -0.1
SF3B6-201ENST00000233468 CT47B1P0C2W7 299 aaPredicted RBP14.44□□□□□ -0.1
SF3B6-201ENST00000233468 PARP10Q53GL7 1025 aa14.44□□□□□ -0.1
SF3B6-201ENST00000233468 NBPF5PQ86XG9 351 aaPredicted RBP14.44□□□□□ -0.1
SF3B6-201ENST00000233468 TTLL6Q8N841 843 aa14.44□□□□□ -0.1
SF3B6-201ENST00000233468 CNBD1Q8NA66 436 aa14.44□□□□□ -0.1
SF3B6-201ENST00000233468 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
SF3B6-201ENST00000233468 SCN7AQ01118 1682 aa14.44□□□□□ -0.1
SF3B6-201ENST00000233468 DICER1Q9UPY3 1922 aaKnown RBP14.43□□□□□ -0.1
SF3B6-201ENST00000233468 LAMB4A4D0S4 1761 aa14.43□□□□□ -0.1
SF3B6-201ENST00000233468 NFKBIEO00221 500 aa14.43□□□□□ -0.1
SF3B6-201ENST00000233468 GTF2E1P29083 439 aaPredicted RBP14.43□□□□□ -0.1
SF3B6-201ENST00000233468 HLFQ16534 295 aa14.43□□□□□ -0.1
SF3B6-201ENST00000233468 RIC3Q7Z5B4 369 aa14.43□□□□□ -0.1
SF3B6-201ENST00000233468 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
SF3B6-201ENST00000233468 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
SF3B6-201ENST00000233468 H0YIN7 160 aa14.42□□□□□ -0.1
SF3B6-201ENST00000233468 LMNB1P20700 586 aa14.42□□□□□ -0.1
SF3B6-201ENST00000233468 FSTL1Q12841 308 aa14.42□□□□□ -0.1
SF3B6-201ENST00000233468 PPP1R42Q7Z4L9 355 aa14.42□□□□□ -0.1
SF3B6-201ENST00000233468 SLX4Q8IY92 1834 aa14.42□□□□□ -0.1
SF3B6-201ENST00000233468 PDE6BP35913 854 aa14.41□□□□□ -0.1
SF3B6-201ENST00000233468 TCIRG1Q13488 830 aa14.41□□□□□ -0.1
SF3B6-201ENST00000233468 BRIP1Q9BX63 1249 aa14.41□□□□□ -0.1
SF3B6-201ENST00000233468 BCORQ6W2J9 1755 aa14.4□□□□□ -0.1
SF3B6-201ENST00000233468 GLTPD2A6NH11 291 aa14.4□□□□□ -0.1
SF3B6-201ENST00000233468 PRR5LQ6MZQ0 368 aa14.4□□□□□ -0.1
SF3B6-201ENST00000233468 ZNF34Q8IZ26 560 aa14.4□□□□□ -0.1
SF3B6-201ENST00000233468 TRMT2AQ8IZ69 625 aaKnown RBP14.4□□□□□ -0.1
SF3B6-201ENST00000233468 ZNF622Q969S3 477 aaKnown RBP eCLIP14.4□□□□□ -0.14e-10■□□□□ 11.1
SF3B6-201ENST00000233468 KLRG1Q96E93 195 aa14.4□□□□□ -0.1
SF3B6-201ENST00000233468 CDCA7LQ96GN5 454 aa14.4□□□□□ -0.1
SF3B6-201ENST00000233468 RNF123Q5XPI4 1314 aa14.4□□□□□ -0.1
SF3B6-201ENST00000233468 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
SF3B6-201ENST00000233468 IBTKQ9P2D0 1353 aaPredicted RBP14.39□□□□□ -0.11
SF3B6-201ENST00000233468 POTECB2RU33 542 aa14.39□□□□□ -0.11
SF3B6-201ENST00000233468 C21orf2O43822 256 aa14.39□□□□□ -0.11
SF3B6-201ENST00000233468 HSP90B1P14625 803 aaKnown RBP14.39□□□□□ -0.11
SF3B6-201ENST00000233468 GPTP24298 496 aa14.39□□□□□ -0.11
SF3B6-201ENST00000233468 NEXNQ0ZGT2 675 aa14.39□□□□□ -0.11
SF3B6-201ENST00000233468 KSR2Q6VAB6 950 aa14.39□□□□□ -0.11
SF3B6-201ENST00000233468 UTP14AQ9BVJ6 771 aaKnown RBP14.39□□□□□ -0.11
SF3B6-201ENST00000233468 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
SF3B6-201ENST00000233468 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
SF3B6-201ENST00000233468 FLIIQ13045 1269 aa14.38□□□□□ -0.11
SF3B6-201ENST00000233468 FKBP5Q13451 457 aaPredicted RBP14.38□□□□□ -0.11
SF3B6-201ENST00000233468 FAM177BA6PVY3 158 aa14.37□□□□□ -0.11
SF3B6-201ENST00000233468 TCERG1O14776 1098 aaKnown RBP14.37□□□□□ -0.11
SF3B6-201ENST00000233468 VEGFAP15692 232 aaPredicted RBP14.37□□□□□ -0.11
SF3B6-201ENST00000233468 TRIM28Q13263 835 aaKnown RBP14.37□□□□□ -0.11
SF3B6-201ENST00000233468 ALDH1L2Q3SY69 923 aa14.37□□□□□ -0.11
SF3B6-201ENST00000233468 COL13A1Q5TAT6 717 aaPredicted RBP14.37□□□□□ -0.11
SF3B6-201ENST00000233468 JMYQ8N9B5 988 aa14.37□□□□□ -0.11
SF3B6-201ENST00000233468 SMC1BQ8NDV3 1235 aa14.37□□□□□ -0.11
SF3B6-201ENST00000233468 PI4KAP2A4QPH2 592 aa14.36□□□□□ -0.11
SF3B6-201ENST00000233468 SUSD4Q5VX71 490 aa14.36□□□□□ -0.11
SF3B6-201ENST00000233468 NLRP10Q86W26 655 aa14.36□□□□□ -0.11
SF3B6-201ENST00000233468 PI4KAP1Q8N8J0 262 aa14.36□□□□□ -0.11
SF3B6-201ENST00000233468 METTL22Q9BUU2 404 aaPredicted RBP14.36□□□□□ -0.11
SF3B6-201ENST00000233468 TRMT112Q9UI30 125 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms