RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 SYT1P21579 422 aa18.76■□□□□ 0.59
DDX1-201ENST00000233084 NBPF6Q5VWK0 638 aa18.76■□□□□ 0.59
DDX1-201ENST00000233084 RPAP2Q8IXW5 612 aaPredicted RBP18.76■□□□□ 0.59
DDX1-201ENST00000233084 ANKRD24Q8TF21 1146 aa18.76■□□□□ 0.59
DDX1-201ENST00000233084 NBPF4Q96M43 638 aa18.76■□□□□ 0.59
DDX1-201ENST00000233084 PAXBP1Q9Y5B6 917 aa18.76■□□□□ 0.59
DDX1-201ENST00000233084 ATP10DQ9P241 1426 aa18.76■□□□□ 0.59
DDX1-201ENST00000233084 STX6O43752 255 aa18.75■□□□□ 0.59
DDX1-201ENST00000233084 TRIM5Q9C035 493 aa18.75■□□□□ 0.59
DDX1-201ENST00000233084 ERBB3P21860 1342 aa18.75■□□□□ 0.59
DDX1-201ENST00000233084 FAM208AQ9UK61 1670 aaKnown RBP18.75■□□□□ 0.59
DDX1-201ENST00000233084 NCAPD2Q15021 1401 aa18.75■□□□□ 0.59
DDX1-201ENST00000233084 CEP135Q66GS9 1140 aa18.75■□□□□ 0.59
DDX1-201ENST00000233084 ZSCAN25Q6NSZ9 544 aa18.75■□□□□ 0.59
DDX1-201ENST00000233084 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
DDX1-201ENST00000233084 ZNF397Q8NF99 534 aaPredicted RBP18.75■□□□□ 0.59
DDX1-201ENST00000233084 FBXO38Q6PIJ6 1188 aa18.74■□□□□ 0.59
DDX1-201ENST00000233084 RGS12O14924 1447 aa18.74■□□□□ 0.59
DDX1-201ENST00000233084 ELF2Q15723 593 aa18.74■□□□□ 0.59
DDX1-201ENST00000233084 NFE2L2Q16236 605 aa18.74■□□□□ 0.59
DDX1-201ENST00000233084 CKAP2LQ8IYA6 745 aa18.74■□□□□ 0.59
DDX1-201ENST00000233084 EXOC6BQ9Y2D4 811 aa18.74■□□□□ 0.59
DDX1-201ENST00000233084 FAM83GA6ND36 823 aa18.73■□□□□ 0.59
DDX1-201ENST00000233084 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
DDX1-201ENST00000233084 F13A1P00488 732 aa18.73■□□□□ 0.59
DDX1-201ENST00000233084 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
DDX1-201ENST00000233084 FAM200AQ8TCP9 573 aa18.73■□□□□ 0.59
DDX1-201ENST00000233084 ZBTB9Q96C00 473 aa18.73■□□□□ 0.59
DDX1-201ENST00000233084 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
DDX1-201ENST00000233084 CACTINQ8WUQ7 758 aaKnown RBP18.72■□□□□ 0.59
DDX1-201ENST00000233084 GTF3C6Q969F1 213 aa18.72■□□□□ 0.59
DDX1-201ENST00000233084 USP27XA6NNY8 438 aa18.71■□□□□ 0.59
DDX1-201ENST00000233084 HNRNPH2P55795 449 aaKnown RBP18.71■□□□□ 0.59
DDX1-201ENST00000233084 PRDM11Q9NQV5 511 aa18.71■□□□□ 0.59
DDX1-201ENST00000233084 TULP2O00295 520 aa18.71■□□□□ 0.59
DDX1-201ENST00000233084 CHMLP26374 656 aa18.71■□□□□ 0.59
DDX1-201ENST00000233084 ANAPC15P60006 121 aa18.71■□□□□ 0.59
DDX1-201ENST00000233084 IL25Q9H293 177 aa18.71■□□□□ 0.59
DDX1-201ENST00000233084 SMC3Q9UQE7 1217 aa18.71■□□□□ 0.59
DDX1-201ENST00000233084 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.7■□□□□ 0.58
DDX1-201ENST00000233084 TYRO3Q06418 890 aa18.7■□□□□ 0.58
DDX1-201ENST00000233084 ZFP91Q96JP5 570 aaPredicted RBP18.7■□□□□ 0.58
DDX1-201ENST00000233084 NOL10Q9BSC4 688 aaKnown RBP18.7■□□□□ 0.58
DDX1-201ENST00000233084 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.7■□□□□ 0.58
DDX1-201ENST00000233084 MRVI1Q9Y6F6 885 aa18.7■□□□□ 0.58
DDX1-201ENST00000233084 SLC20A2Q08357 652 aa18.7■□□□□ 0.58
DDX1-201ENST00000233084 ANO6Q4KMQ2 910 aa18.7■□□□□ 0.58
DDX1-201ENST00000233084 VPS37CA5D8V6 355 aaPredicted RBP18.69■□□□□ 0.58
DDX1-201ENST00000233084 ARID5BQ14865 1188 aa18.69■□□□□ 0.58
DDX1-201ENST00000233084 CCDC144BQ3MJ40 725 aa18.69■□□□□ 0.58
DDX1-201ENST00000233084 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
DDX1-201ENST00000233084 CCDC144CPQ8IYA2 1237 aa18.69■□□□□ 0.58
DDX1-201ENST00000233084 CBX8Q9HC52 389 aa18.69■□□□□ 0.58
DDX1-201ENST00000233084 TRMT1Q9NXH9 659 aaKnown RBP18.69■□□□□ 0.58
DDX1-201ENST00000233084 CLIP2Q9UDT6 1046 aa18.69■□□□□ 0.58
DDX1-201ENST00000233084 COL5A2P05997 1499 aaPredicted RBP18.69■□□□□ 0.58
DDX1-201ENST00000233084 CPA1P15085 419 aa18.68■□□□□ 0.58
DDX1-201ENST00000233084 MAP3K11Q16584 847 aa18.68■□□□□ 0.58
DDX1-201ENST00000233084 ATP6V1DQ9Y5K8 247 aa18.68■□□□□ 0.58
DDX1-201ENST00000233084 COL14A1Q05707 1796 aaKnown RBP18.68■□□□□ 0.58
DDX1-201ENST00000233084 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
DDX1-201ENST00000233084 SLC4A10Q6U841 1118 aa18.68■□□□□ 0.58
DDX1-201ENST00000233084 ZNF75DP51815 510 aa18.67■□□□□ 0.58
DDX1-201ENST00000233084 AK2P54819 239 aa18.67■□□□□ 0.58
DDX1-201ENST00000233084 ZNF446Q9NWS9 450 aa18.67■□□□□ 0.58
DDX1-201ENST00000233084 LIG1P18858 919 aa18.67■□□□□ 0.58
DDX1-201ENST00000233084 NUP62CLQ9H1M0 184 aa18.67■□□□□ 0.58
DDX1-201ENST00000233084 MAP4K4O95819 1239 aaPredicted RBP18.66■□□□□ 0.58
DDX1-201ENST00000233084 ZNF853P0CG23 659 aa18.66■□□□□ 0.58
DDX1-201ENST00000233084 OSBPL3Q9H4L5 887 aa18.66■□□□□ 0.58
DDX1-201ENST00000233084 PTPN14Q15678 1187 aa18.66■□□□□ 0.58
DDX1-201ENST00000233084 FAM173BQ6P4H8 233 aa18.66■□□□□ 0.58
DDX1-201ENST00000233084 FEZ2Q9UHY8 353 aaPredicted RBP18.66■□□□□ 0.58
DDX1-201ENST00000233084 HMMRO75330 724 aa18.65■□□□□ 0.58
DDX1-201ENST00000233084 IRX3P78415 501 aaPredicted RBP18.65■□□□□ 0.58
DDX1-201ENST00000233084 CCDC83Q8IWF9 413 aa18.65■□□□□ 0.58
DDX1-201ENST00000233084 LARGE1O95461 756 aa18.65■□□□□ 0.58
DDX1-201ENST00000233084 FERMT3Q86UX7 667 aa18.65■□□□□ 0.58
DDX1-201ENST00000233084 GJB2P29033 226 aa18.65■□□□□ 0.58
DDX1-201ENST00000233084 CYP2C19P33261 490 aa18.65■□□□□ 0.58
DDX1-201ENST00000233084 RAD51AP2Q09MP3 1159 aa18.65■□□□□ 0.58
DDX1-201ENST00000233084 PLCH1Q4KWH8 1693 aa18.64■□□□□ 0.58
DDX1-201ENST00000233084 TNNT3P45378 269 aaPredicted RBP18.64■□□□□ 0.57
DDX1-201ENST00000233084 RUFY3Q7L099 469 aa18.64■□□□□ 0.57
DDX1-201ENST00000233084 TNMDQ9H2S6 317 aa18.64■□□□□ 0.57
DDX1-201ENST00000233084 NLRP2Q9NX02 1062 aa18.64■□□□□ 0.57
DDX1-201ENST00000233084 FAM53CQ9NYF3 392 aa18.64■□□□□ 0.57
DDX1-201ENST00000233084 PLA2G4DQ86XP0 818 aa18.64■□□□□ 0.57
DDX1-201ENST00000233084 RAD50Q92878 1312 aa18.64■□□□□ 0.57
DDX1-201ENST00000233084 CSB-PGBD3P0DP91 1061 aa18.63■□□□□ 0.57
DDX1-201ENST00000233084 NEK11Q8NG66 645 aa18.63■□□□□ 0.57
DDX1-201ENST00000233084 SYTL4Q96C24 671 aaPredicted RBP18.63■□□□□ 0.57
DDX1-201ENST00000233084 WDR17Q8IZU2 1322 aa18.63■□□□□ 0.57
DDX1-201ENST00000233084 POLR3GO15318 223 aaPredicted RBP18.63■□□□□ 0.57
DDX1-201ENST00000233084 DNAJC25Q9H1X3 360 aa18.63■□□□□ 0.57
DDX1-201ENST00000233084 DACT1Q9NYF0 836 aa18.63■□□□□ 0.57
DDX1-201ENST00000233084 MTMR6Q9Y217 621 aa18.63■□□□□ 0.57
DDX1-201ENST00000233084 LRRC37A3O60309 1634 aa18.62■□□□□ 0.57
DDX1-201ENST00000233084 F6X3S4 739 aa18.62■□□□□ 0.57
DDX1-201ENST00000233084 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms