RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 ADAMTS2O95450 1211 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 SPECC1Q5M775 1068 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 NEK1Q96PY6 1258 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 IDEP14735 1019 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 STXBP4Q6ZWJ1 553 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 FAM83GA6ND36 823 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 C6orf229H3BNL8 230 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 ZSCAN23Q3MJ62 389 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 KANK3Q6NY19 840 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
LAMA4-201ENST00000230538 HAND2P61296 217 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 NCOA7Q8NI08 942 aa13.29□□□□□ -0.28
LAMA4-201ENST00000230538 CDC5LQ99459 802 aaKnown RBP13.29□□□□□ -0.28
LAMA4-201ENST00000230538 PRPF4BQ13523 1007 aaKnown RBP13.28□□□□□ -0.28
LAMA4-201ENST00000230538 MICU3Q86XE3 530 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 SYCP3Q8IZU3 236 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 PANK2Q9BZ23 570 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 ORC3Q9UBD5 711 aaPredicted RBP13.28□□□□□ -0.28
LAMA4-201ENST00000230538 PRC1O43663 620 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 LDHAL6AQ6ZMR3 332 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 NOP2P46087 812 aaKnown RBP13.28□□□□□ -0.28
LAMA4-201ENST00000230538 SLC4A8Q2Y0W8 1093 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
LAMA4-201ENST00000230538 BAG3O95817 575 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.28□□□□□ -0.28
LAMA4-201ENST00000230538 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 SNW1Q13573 536 aaKnown RBP13.28□□□□□ -0.28
LAMA4-201ENST00000230538 FEZ1Q99689 392 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 HMG20BQ9P0W2 317 aa13.28□□□□□ -0.28
LAMA4-201ENST00000230538 PIK3R4Q99570 1358 aa13.27□□□□□ -0.28
LAMA4-201ENST00000230538 GOLGA6L9A6NEM1 432 aa13.27□□□□□ -0.28
LAMA4-201ENST00000230538 LDHCP07864 332 aa13.27□□□□□ -0.28
LAMA4-201ENST00000230538 TTC21AQ8NDW8 1320 aa13.27□□□□□ -0.28
LAMA4-201ENST00000230538 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.28
LAMA4-201ENST00000230538 CTR9Q6PD62 1173 aa13.27□□□□□ -0.28
LAMA4-201ENST00000230538 TRMT1LQ7Z2T5 733 aaKnown RBP13.27□□□□□ -0.28
LAMA4-201ENST00000230538 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.29
LAMA4-201ENST00000230538 UBA7P41226 1012 aa13.27□□□□□ -0.29
LAMA4-201ENST00000230538 NOS1P29475 1434 aa13.27□□□□□ -0.29
LAMA4-201ENST00000230538 AMOTL2Q9Y2J4 779 aa13.27□□□□□ -0.29
LAMA4-201ENST00000230538 EXOC5O00471 708 aa13.27□□□□□ -0.29
LAMA4-201ENST00000230538 PPM1FP49593 454 aaPredicted RBP13.27□□□□□ -0.29
LAMA4-201ENST00000230538 TEX13AQ9BXU3 409 aaPredicted RBP13.27□□□□□ -0.29
LAMA4-201ENST00000230538 SAMM50Q9Y512 469 aa13.27□□□□□ -0.29
LAMA4-201ENST00000230538 FOXO3O43524 673 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 CCDC175P0C221 793 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 UBE2HP62256 183 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
LAMA4-201ENST00000230538 LRRC27Q9C0I9 530 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 BMP2KLQ5H9B9 411 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 CCDC102BQ68D86 513 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
LAMA4-201ENST00000230538 TBC1D32Q96NH3 1257 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 DDX46Q7L014 1031 aaKnown RBP13.26□□□□□ -0.29
LAMA4-201ENST00000230538 PPP1R42Q7Z4L9 355 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 CABP5Q9NP86 173 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 HLA-DOAP06340 250 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 JADE2Q9NQC1 790 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 EXOC1Q9NV70 894 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 PUF60Q9UHX1 559 aaKnown RBP13.26□□□□□ -0.29
LAMA4-201ENST00000230538 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
LAMA4-201ENST00000230538 ZNF165P49910 485 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 MAATS1Q7Z4T9 603 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 KIAA0586Q9BVV6 1533 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 NUCB1Q02818 461 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 UBE3BQ7Z3V4 1068 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 COMMD10Q9Y6G5 202 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 ADGRL1O94910 1474 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 NSD2O96028 1365 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 DHX29Q7Z478 1369 aaKnown RBP13.25□□□□□ -0.29
LAMA4-201ENST00000230538 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 CEP63Q96MT8 703 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
LAMA4-201ENST00000230538 ZSCAN16Q9H4T2 348 aaPredicted RBP13.25□□□□□ -0.29
LAMA4-201ENST00000230538 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 RMND1Q9NWS8 449 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 GIMAP6Q6P9H5 292 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 MYO1BO43795 1136 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 MCM5P33992 734 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 UVSSAQ2YD98 709 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
LAMA4-201ENST00000230538 CRNKL1Q9BZJ0 848 aaKnown RBP13.24□□□□□ -0.29
LAMA4-201ENST00000230538 FAM107BQ9H098 131 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 MMRN2Q9H8L6 949 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 FSD2A1L4K1 749 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 PI4KAP2A4QPH2 592 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 TBCAO75347 108 aaKnown RBP13.24□□□□□ -0.29
LAMA4-201ENST00000230538 PI4KAP1Q8N8J0 262 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 ZNF830Q96NB3 372 aaPredicted RBP13.24□□□□□ -0.29
LAMA4-201ENST00000230538 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
LAMA4-201ENST00000230538 GSTO1P78417 241 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 IFI16Q16666 785 aaKnown RBP13.23□□□□□ -0.29
LAMA4-201ENST00000230538 NECAB1Q8N987 351 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms