RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 LINS1Q8NG48 757 aa16.19■□□□□ 0.18
COPS7A-201ENST00000229251 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
COPS7A-201ENST00000229251 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
COPS7A-201ENST00000229251 RAB11FIP3O75154 756 aa16.18■□□□□ 0.18
COPS7A-201ENST00000229251 SSFA2P28290 1259 aa16.18■□□□□ 0.18
COPS7A-201ENST00000229251 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
COPS7A-201ENST00000229251 NMRK2Q9NPI5 230 aa16.18■□□□□ 0.18
COPS7A-201ENST00000229251 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
COPS7A-201ENST00000229251 UTYO14607 1347 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 AOX1Q06278 1338 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 ITGB4P16144 1822 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
COPS7A-201ENST00000229251 PHF14O94880 888 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 GSPT1P15170 499 aaKnown RBP16.17■□□□□ 0.18
COPS7A-201ENST00000229251 MFAP1P55081 439 aaKnown RBP16.17■□□□□ 0.18
COPS7A-201ENST00000229251 FSTL1Q12841 308 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 PDIA6Q15084 440 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
COPS7A-201ENST00000229251 MAP3K2Q9Y2U5 619 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
COPS7A-201ENST00000229251 PNMA6EA0A0J9YXQ4 647 aa16.16■□□□□ 0.18
COPS7A-201ENST00000229251 SALL3Q9BXA9 1300 aa16.16■□□□□ 0.18
COPS7A-201ENST00000229251 AFDNP55196 1824 aaKnown RBP16.16■□□□□ 0.18
COPS7A-201ENST00000229251 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
COPS7A-201ENST00000229251 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
COPS7A-201ENST00000229251 TBC1D9Q6ZT07 1266 aa16.16■□□□□ 0.18
COPS7A-201ENST00000229251 KCPQ6ZWJ8 1503 aa16.15■□□□□ 0.18
COPS7A-201ENST00000229251 TGFB2P61812 414 aa16.15■□□□□ 0.18
COPS7A-201ENST00000229251 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
COPS7A-201ENST00000229251 AMIGO3Q86WK7 504 aa16.15■□□□□ 0.18
COPS7A-201ENST00000229251 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 ANXA1P04083 346 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 AK9Q5TCS8 1911 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 NBPF7P0C2Y1 421 aaPredicted RBP16.14■□□□□ 0.17
COPS7A-201ENST00000229251 PDE1AP54750 535 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 NEXNQ0ZGT2 675 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 PPP1R42Q7Z4L9 355 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 STAP2Q9UGK3 403 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 EXOC6BQ9Y2D4 811 aa16.14■□□□□ 0.17
COPS7A-201ENST00000229251 BRCA1P38398 1863 aaKnown RBP16.13■□□□□ 0.17
COPS7A-201ENST00000229251 HTRA3P83110 453 aa16.13■□□□□ 0.17
COPS7A-201ENST00000229251 ARHGAP27Q6ZUM4 889 aa16.13■□□□□ 0.17
COPS7A-201ENST00000229251 C9orf78Q9NZ63 289 aaPredicted RBP16.13■□□□□ 0.17
COPS7A-201ENST00000229251 COL15A1P39059 1388 aa16.13■□□□□ 0.17
COPS7A-201ENST00000229251 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
COPS7A-201ENST00000229251 GRM8O00222 908 aa16.12■□□□□ 0.17
COPS7A-201ENST00000229251 SRGAP3O43295 1099 aa16.12■□□□□ 0.17
COPS7A-201ENST00000229251 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
COPS7A-201ENST00000229251 LRP10Q7Z4F1 713 aa16.12■□□□□ 0.17
COPS7A-201ENST00000229251 KIF1BPQ96EK5 621 aa16.12■□□□□ 0.17
COPS7A-201ENST00000229251 C10orf71Q711Q0 1435 aa16.12■□□□□ 0.17
COPS7A-201ENST00000229251 MX1P20591 662 aa16.11■□□□□ 0.17
COPS7A-201ENST00000229251 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
COPS7A-201ENST00000229251 MMP10P09238 476 aa16.11■□□□□ 0.17
COPS7A-201ENST00000229251 SDSP20132 328 aa16.11■□□□□ 0.17
COPS7A-201ENST00000229251 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
COPS7A-201ENST00000229251 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-201ENST00000229251 METTL22Q9BUU2 404 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-201ENST00000229251 APBB1O00213 710 aa16.1■□□□□ 0.17
COPS7A-201ENST00000229251 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
COPS7A-201ENST00000229251 ERC1Q8IUD2 1116 aa16.1■□□□□ 0.17
COPS7A-201ENST00000229251 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
COPS7A-201ENST00000229251 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
COPS7A-201ENST00000229251 SNX21Q969T3 373 aa16.09■□□□□ 0.17
COPS7A-201ENST00000229251 USP16Q9Y5T5 823 aa16.09■□□□□ 0.17
COPS7A-201ENST00000229251 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.17
COPS7A-201ENST00000229251 GNPATO15228 680 aa16.08■□□□□ 0.17
COPS7A-201ENST00000229251 SURF6O75683 361 aaKnown RBP16.08■□□□□ 0.17
COPS7A-201ENST00000229251 SIK1P57059 783 aa16.08■□□□□ 0.17
COPS7A-201ENST00000229251 C9orf131Q5VYM1 1079 aa16.08■□□□□ 0.17
COPS7A-201ENST00000229251 COPS6Q7L5N1 327 aa16.08■□□□□ 0.17
COPS7A-201ENST00000229251 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.17
COPS7A-201ENST00000229251 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.17
COPS7A-201ENST00000229251 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
COPS7A-201ENST00000229251 NEURL1BA8MQ27 555 aa16.08■□□□□ 0.16
COPS7A-201ENST00000229251 REC8O95072 547 aa16.08■□□□□ 0.16
COPS7A-201ENST00000229251 RHPN1Q8TCX5 695 aa16.08■□□□□ 0.16
COPS7A-201ENST00000229251 IGKV5-2P06315 115 aa16.07■□□□□ 0.16
COPS7A-201ENST00000229251 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
COPS7A-201ENST00000229251 CWF19L2Q2TBE0 894 aaKnown RBP16.07■□□□□ 0.16
COPS7A-201ENST00000229251 VSIG10Q8N0Z9 540 aa16.07■□□□□ 0.16
COPS7A-201ENST00000229251 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
COPS7A-201ENST00000229251 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
COPS7A-201ENST00000229251 PIGBQ92521 554 aa16.07■□□□□ 0.16
COPS7A-201ENST00000229251 CCDC87Q9NVE4 849 aa16.07■□□□□ 0.16
COPS7A-201ENST00000229251 USP42Q9H9J4 1324 aaKnown RBP16.07■□□□□ 0.16
COPS7A-201ENST00000229251 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
COPS7A-201ENST00000229251 EPB41L2O43491 1005 aaKnown RBP16.06■□□□□ 0.16
COPS7A-201ENST00000229251 MYL6BP14649 208 aa16.06■□□□□ 0.16
COPS7A-201ENST00000229251 AIMP1Q12904 312 aaKnown RBP16.06■□□□□ 0.16
COPS7A-201ENST00000229251 GCKRQ14397 625 aa16.06■□□□□ 0.16
COPS7A-201ENST00000229251 RTL5Q5HYW3 569 aaPredicted RBP16.06■□□□□ 0.16
COPS7A-201ENST00000229251 NLGN1Q8N2Q7 840 aa16.06■□□□□ 0.16
COPS7A-201ENST00000229251 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
COPS7A-201ENST00000229251 TEX13AQ9BXU3 409 aaPredicted RBP16.05■□□□□ 0.16
COPS7A-201ENST00000229251 TMOD3Q9NYL9 352 aa16.05■□□□□ 0.16
COPS7A-201ENST00000229251 HSPA1AP0DMV8 641 aaKnown RBP16.05■□□□□ 0.16
COPS7A-201ENST00000229251 HSPA1BP0DMV9 641 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms