RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 CBX1P83916 185 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 USP48Q86UV5 1035 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 ZNF397Q8NF99 534 aaPredicted RBP18.73■□□□□ 0.59
HDAC5-201ENST00000225983 NCOA7Q8NI08 942 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 EXOC5O00471 708 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 IQCEQ6IPM2 695 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 TMCO3Q6UWJ1 677 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 EIF2AK4Q9P2K8 1649 aaKnown RBP18.73■□□□□ 0.59
HDAC5-201ENST00000225983 A0A1W2PP64 1363 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
HDAC5-201ENST00000225983 CATIPQ7Z7H3 387 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 SNX21Q969T3 373 aa18.73■□□□□ 0.59
HDAC5-201ENST00000225983 GRM8O00222 908 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 CASQ1P31415 396 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 LRRC59Q96AG4 307 aaKnown RBP18.72■□□□□ 0.59
HDAC5-201ENST00000225983 DCTPP1Q9H773 170 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 WDR62O43379 1518 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 NCKAP5LQ9HCH0 1330 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 RIMS2Q9UQ26 1411 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 CCDC148Q8NFR7 591 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 SLC26A6Q9BXS9 759 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 PHAXQ9H814 394 aaKnown RBP18.72■□□□□ 0.59
HDAC5-201ENST00000225983 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
HDAC5-201ENST00000225983 KIAA0556O60303 1618 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 CCDC194A0A1B0GVG4 234 aa18.72■□□□□ 0.59
HDAC5-201ENST00000225983 ZNF830Q96NB3 372 aaPredicted RBP18.72■□□□□ 0.59
HDAC5-201ENST00000225983 KIF5CO60282 957 aa18.71■□□□□ 0.59
HDAC5-201ENST00000225983 KIF4BQ2VIQ3 1234 aa18.71■□□□□ 0.59
HDAC5-201ENST00000225983 PRDM10Q9NQV6 1147 aa18.71■□□□□ 0.59
HDAC5-201ENST00000225983 KLF18A0A0U1RQI7 1052 aa18.71■□□□□ 0.59
HDAC5-201ENST00000225983 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
HDAC5-201ENST00000225983 MFSD6Q6ZSS7 791 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 TAF4BQ92750 862 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
HDAC5-201ENST00000225983 SPA17Q15506 151 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 LMBR1LQ6UX01 489 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 PZPP20742 1482 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 ANAPC15P60006 121 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 FKBP15Q5T1M5 1219 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 PLEKHM2Q8IWE5 1019 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 UHRF1BP1LA0JNW5 1464 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 NMIQ13287 307 aaPredicted RBP18.7■□□□□ 0.58
HDAC5-201ENST00000225983 CCDC96Q2M329 555 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
HDAC5-201ENST00000225983 ENOX2Q16206 610 aaKnown RBP18.69■□□□□ 0.58
HDAC5-201ENST00000225983 TEX13AQ9BXU3 409 aaPredicted RBP18.69■□□□□ 0.58
HDAC5-201ENST00000225983 AKAP4Q5JQC9 854 aa18.69■□□□□ 0.58
HDAC5-201ENST00000225983 MCM5P33992 734 aa18.69■□□□□ 0.58
HDAC5-201ENST00000225983 ZGPATQ8N5A5 531 aaKnown RBP18.69■□□□□ 0.58
HDAC5-201ENST00000225983 ALDH1L1O75891 902 aa18.69■□□□□ 0.58
HDAC5-201ENST00000225983 DNM1Q05193 864 aaKnown RBP18.69■□□□□ 0.58
HDAC5-201ENST00000225983 CWF19L2Q2TBE0 894 aaKnown RBP18.69■□□□□ 0.58
HDAC5-201ENST00000225983 UBA5Q9GZZ9 404 aa18.69■□□□□ 0.58
HDAC5-201ENST00000225983 ZNF518AQ6AHZ1 1483 aa18.69■□□□□ 0.58
HDAC5-201ENST00000225983 NEFHP12036 1026 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 UVSSAQ2YD98 709 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 Q6ZUG5 572 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 CACNA2D4Q7Z3S7 1137 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 ZSCAN16Q9H4T2 348 aaPredicted RBP18.68■□□□□ 0.58
HDAC5-201ENST00000225983 TAX1BP1Q86VP1 789 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 COL17A1Q9UMD9 1497 aaPredicted RBP18.68■□□□□ 0.58
HDAC5-201ENST00000225983 DNA2P51530 1060 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 CCDC191Q8NCU4 936 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 ABCC1P33527 1531 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 ARHGEF12Q9NZN5 1544 aa18.68■□□□□ 0.58
HDAC5-201ENST00000225983 NPATQ14207 1427 aa18.67■□□□□ 0.58
HDAC5-201ENST00000225983 TMOD2Q9NZR1 351 aa18.67■□□□□ 0.58
HDAC5-201ENST00000225983 F13A1P00488 732 aa18.67■□□□□ 0.58
HDAC5-201ENST00000225983 GSDMDP57764 484 aa18.67■□□□□ 0.58
HDAC5-201ENST00000225983 MCMDC2Q4G0Z9 681 aa18.67■□□□□ 0.58
HDAC5-201ENST00000225983 KIAA0754O94854 1291 aa18.67■□□□□ 0.58
HDAC5-201ENST00000225983 ANO6Q4KMQ2 910 aa18.67■□□□□ 0.58
HDAC5-201ENST00000225983 NEMFO60524 1076 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 EYA1Q99502 592 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 VAT1LQ9HCJ6 419 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 MATR3P43243 847 aaKnown RBP eCLIP18.66■□□□□ 0.589e-7■■□□□ 13.9
HDAC5-201ENST00000225983 TAF3Q5VWG9 929 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 TSG101Q99816 390 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 FLT4P35916 1363 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 RPGRQ92834 1020 aaKnown RBP18.66■□□□□ 0.58
HDAC5-201ENST00000225983 CDC5LQ99459 802 aaKnown RBP18.66■□□□□ 0.58
HDAC5-201ENST00000225983 IQSEC3Q9UPP2 1182 aaPredicted RBP18.66■□□□□ 0.58
HDAC5-201ENST00000225983 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 CCDC102BQ68D86 513 aa18.66■□□□□ 0.58
HDAC5-201ENST00000225983 AK2P54819 239 aa18.65■□□□□ 0.58
HDAC5-201ENST00000225983 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
HDAC5-201ENST00000225983 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
HDAC5-201ENST00000225983 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
HDAC5-201ENST00000225983 DACT1Q9NYF0 836 aa18.65■□□□□ 0.58
HDAC5-201ENST00000225983 MSH6P52701 1360 aa18.65■□□□□ 0.58
HDAC5-201ENST00000225983 PRKCSHP14314 528 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-201ENST00000225983 PRIM1P49642 420 aaKnown RBP18.65■□□□□ 0.58
HDAC5-201ENST00000225983 TMEM266Q2M3C6 531 aa18.65■□□□□ 0.58
HDAC5-201ENST00000225983 CRACR2AQ9BSW2 395 aa18.65■□□□□ 0.58
HDAC5-201ENST00000225983 ZBTB7BO15156 539 aaPredicted RBP18.64■□□□□ 0.58
HDAC5-201ENST00000225983 ATP2B3Q16720 1220 aa18.64■□□□□ 0.58
HDAC5-201ENST00000225983 ZCRB1Q8TBF4 217 aaKnown RBP18.64■□□□□ 0.58
HDAC5-201ENST00000225983 PUS7Q96PZ0 661 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms