RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CT47B1P0C2W7 299 aaPredicted RBP18.39■□□□□ 0.54
SUPT4H1-201ENST00000225504 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.54
SUPT4H1-201ENST00000225504 ST5P78524 1137 aa18.39■□□□□ 0.54
SUPT4H1-201ENST00000225504 ALDH1L2Q3SY69 923 aa18.39■□□□□ 0.54
SUPT4H1-201ENST00000225504 C2CD5Q86YS7 1000 aa18.39■□□□□ 0.54
SUPT4H1-201ENST00000225504 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.54
SUPT4H1-201ENST00000225504 NYXQ9GZU5 481 aa18.39■□□□□ 0.54
SUPT4H1-201ENST00000225504 TRMT112Q9UI30 125 aaKnown RBP18.39■□□□□ 0.54
SUPT4H1-201ENST00000225504 CWF19L2Q2TBE0 894 aaKnown RBP18.39■□□□□ 0.53
SUPT4H1-201ENST00000225504 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
SUPT4H1-201ENST00000225504 C3orf67Q6ZVT6 689 aa18.39■□□□□ 0.53
SUPT4H1-201ENST00000225504 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
SUPT4H1-201ENST00000225504 DNAAF4Q8WXU2 420 aa18.39■□□□□ 0.53
SUPT4H1-201ENST00000225504 SMC4Q9NTJ3 1288 aa18.39■□□□□ 0.53
SUPT4H1-201ENST00000225504 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.533e-10■■■■■ 36.9
SUPT4H1-201ENST00000225504 PDE6BP35913 854 aa18.38■□□□□ 0.53
SUPT4H1-201ENST00000225504 FAM89AQ96GI7 184 aa18.38■□□□□ 0.53
SUPT4H1-201ENST00000225504 H0YIN7 160 aa18.37■□□□□ 0.53
SUPT4H1-201ENST00000225504 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
SUPT4H1-201ENST00000225504 SLC10A5Q5PT55 438 aa18.37■□□□□ 0.53
SUPT4H1-201ENST00000225504 IBTKQ9P2D0 1353 aaPredicted RBP18.36■□□□□ 0.53
SUPT4H1-201ENST00000225504 KLRG2A4D1S0 409 aaPredicted RBP18.36■□□□□ 0.53
SUPT4H1-201ENST00000225504 BCAR3O75815 825 aa18.36■□□□□ 0.53
SUPT4H1-201ENST00000225504 GPR162Q16538 588 aa18.36■□□□□ 0.53
SUPT4H1-201ENST00000225504 CCDC191Q8NCU4 936 aa18.36■□□□□ 0.53
SUPT4H1-201ENST00000225504 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
SUPT4H1-201ENST00000225504 SRGNP10124 158 aa18.35■□□□□ 0.53
SUPT4H1-201ENST00000225504 CWC25Q9NXE8 425 aaPredicted RBP18.35■□□□□ 0.53
SUPT4H1-201ENST00000225504 PIM2Q9P1W9 311 aa18.35■□□□□ 0.53
SUPT4H1-201ENST00000225504 NOB1Q9ULX3 412 aaKnown RBP18.35■□□□□ 0.53
SUPT4H1-201ENST00000225504 SH3TC1Q8TE82 1336 aa18.35■□□□□ 0.53
SUPT4H1-201ENST00000225504 NEXNQ0ZGT2 675 aa18.34■□□□□ 0.53
SUPT4H1-201ENST00000225504 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
SUPT4H1-201ENST00000225504 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
SUPT4H1-201ENST00000225504 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.53
SUPT4H1-201ENST00000225504 TNRC6CQ9HCJ0 1690 aaKnown RBP18.34■□□□□ 0.53
SUPT4H1-201ENST00000225504 LINS1Q8NG48 757 aa18.33■□□□□ 0.53
SUPT4H1-201ENST00000225504 BCS1LQ9Y276 419 aa18.33■□□□□ 0.53
SUPT4H1-201ENST00000225504 COL11A2P13942 1736 aaPredicted RBP18.33■□□□□ 0.52
SUPT4H1-201ENST00000225504 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
SUPT4H1-201ENST00000225504 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.52
SUPT4H1-201ENST00000225504 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
SUPT4H1-201ENST00000225504 GCKRQ14397 625 aa18.32■□□□□ 0.52
SUPT4H1-201ENST00000225504 DALRD3Q5D0E6 543 aaKnown RBP18.32■□□□□ 0.52
SUPT4H1-201ENST00000225504 PTPRCP08575 1304 aa18.32■□□□□ 0.52
SUPT4H1-201ENST00000225504 BRCA1P38398 1863 aaKnown RBP18.32■□□□□ 0.52
SUPT4H1-201ENST00000225504 GOLGB1Q14789 3259 aaKnown RBP18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 H7C1W4 665 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 IRS4O14654 1257 aaPredicted RBP18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 CRY2Q49AN0 593 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 STYK1Q6J9G0 422 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 MASTLQ96GX5 879 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 NLRP3Q96P20 1036 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 PDZRN3Q9UPQ7 1066 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 RNF123Q5XPI4 1314 aa18.31■□□□□ 0.52
SUPT4H1-201ENST00000225504 NPR1P16066 1061 aa18.3■□□□□ 0.52
SUPT4H1-201ENST00000225504 DLEC1Q9Y238 1755 aa18.29■□□□□ 0.52
SUPT4H1-201ENST00000225504 RIC1Q4ADV7 1423 aa18.29■□□□□ 0.52
SUPT4H1-201ENST00000225504 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
SUPT4H1-201ENST00000225504 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
SUPT4H1-201ENST00000225504 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
SUPT4H1-201ENST00000225504 CASP7P55210 303 aa18.28■□□□□ 0.52
SUPT4H1-201ENST00000225504 UBE3BQ7Z3V4 1068 aa18.28■□□□□ 0.52
SUPT4H1-201ENST00000225504 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
SUPT4H1-201ENST00000225504 SLX4Q8IY92 1834 aa18.27■□□□□ 0.52
SUPT4H1-201ENST00000225504 HOXA10P31260 410 aaPredicted RBP18.27■□□□□ 0.52
SUPT4H1-201ENST00000225504 SLC51AQ86UW1 340 aa18.27■□□□□ 0.52
SUPT4H1-201ENST00000225504 CNKSR1Q969H4 720 aa18.27■□□□□ 0.52
SUPT4H1-201ENST00000225504 SRCIN1Q9C0H9 1055 aa18.27■□□□□ 0.52
SUPT4H1-201ENST00000225504 LAMB2P55268 1798 aa18.27■□□□□ 0.52
SUPT4H1-201ENST00000225504 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 RPGRQ92834 1020 aaKnown RBP18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 CDHR2Q9BYE9 1310 aa18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 C21orf2O43822 256 aa18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 GRIN3BO60391 1043 aa18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 SF3B3Q15393 1217 aaKnown RBP18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 ARHGAP45Q92619 1136 aa18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 API5Q9BZZ5 524 aaKnown RBP18.26■□□□□ 0.51
SUPT4H1-201ENST00000225504 PDE8AO60658 829 aa18.25■□□□□ 0.51
SUPT4H1-201ENST00000225504 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
SUPT4H1-201ENST00000225504 C7orf43Q8WVR3 580 aa18.25■□□□□ 0.51
SUPT4H1-201ENST00000225504 RBM17Q96I25 401 aaKnown RBP18.25■□□□□ 0.51
SUPT4H1-201ENST00000225504 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
SUPT4H1-201ENST00000225504 CRAMP1Q96RY5 1269 aa18.25■□□□□ 0.51
SUPT4H1-201ENST00000225504 TAF1P21675 1872 aa18.25■□□□□ 0.51
SUPT4H1-201ENST00000225504 KIF16BQ96L93 1317 aa18.24■□□□□ 0.51
SUPT4H1-201ENST00000225504 CACNA1SQ13698 1873 aa18.24■□□□□ 0.51
SUPT4H1-201ENST00000225504 TRIM27P14373 513 aa18.24■□□□□ 0.51
SUPT4H1-201ENST00000225504 ALDH1B1P30837 517 aa18.24■□□□□ 0.51
SUPT4H1-201ENST00000225504 GRM8O00222 908 aa18.23■□□□□ 0.51
SUPT4H1-201ENST00000225504 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
SUPT4H1-201ENST00000225504 NBPF7P0C2Y1 421 aaPredicted RBP18.23■□□□□ 0.51
SUPT4H1-201ENST00000225504 CLUAP1Q96AJ1 413 aa18.23■□□□□ 0.51
SUPT4H1-201ENST00000225504 SEC31BQ9NQW1 1179 aa18.23■□□□□ 0.51
SUPT4H1-201ENST00000225504 C9orf78Q9NZ63 289 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms