RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 SALL3Q9BXA9 1300 aa15.85■□□□□ 0.13
PLOD3-201ENST00000223127 UBE3BQ7Z3V4 1068 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 KLHDC4Q8TBB5 520 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 SIL1Q9H173 461 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 SHANK3Q9BYB0 1731 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 MAP4K4O95819 1239 aaPredicted RBP15.84■□□□□ 0.13
PLOD3-201ENST00000223127 EPHA10Q5JZY3 1008 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 UBAP1LF5GYI3 381 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 MTX1Q13505 466 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 CASC1Q6TDU7 716 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 PLBD2Q8NHP8 589 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 HDAC5Q9UQL6 1122 aa15.84■□□□□ 0.13
PLOD3-201ENST00000223127 UQCRHLA0A096LP55 91 aa15.83■□□□□ 0.12
PLOD3-201ENST00000223127 UQCRHP07919 91 aa15.83■□□□□ 0.12
PLOD3-201ENST00000223127 DNAJC10Q8IXB1 793 aa15.83■□□□□ 0.12
PLOD3-201ENST00000223127 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
PLOD3-201ENST00000223127 ZKSCAN5Q9Y2L8 839 aa15.83■□□□□ 0.12
PLOD3-201ENST00000223127 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.12
PLOD3-201ENST00000223127 COL14A1Q05707 1796 aaKnown RBP15.83■□□□□ 0.12
PLOD3-201ENST00000223127 A0A087WZG4 1122 aa15.83■□□□□ 0.12
PLOD3-201ENST00000223127 ATG3Q9NT62 314 aa15.83■□□□□ 0.12
PLOD3-201ENST00000223127 KCPQ6ZWJ8 1503 aa15.82■□□□□ 0.12
PLOD3-201ENST00000223127 UNC5CLQ8IV45 518 aa15.82■□□□□ 0.12
PLOD3-201ENST00000223127 ZGPATQ8N5A5 531 aaKnown RBP15.82■□□□□ 0.12
PLOD3-201ENST00000223127 GLI3P10071 1580 aa15.82■□□□□ 0.12
PLOD3-201ENST00000223127 UTYO14607 1347 aa15.82■□□□□ 0.12
PLOD3-201ENST00000223127 HSP90AB4PQ58FF6 505 aa15.82■□□□□ 0.12
PLOD3-201ENST00000223127 USP26Q9BXU7 913 aa15.82■□□□□ 0.12
PLOD3-201ENST00000223127 MAP7D2Q96T17 732 aa15.81■□□□□ 0.12
PLOD3-201ENST00000223127 PHLPP1O60346 1717 aa15.81■□□□□ 0.12
PLOD3-201ENST00000223127 DISP2A7MBM2 1401 aa15.81■□□□□ 0.12
PLOD3-201ENST00000223127 ZDHHC9Q9Y397 364 aa15.81■□□□□ 0.12
PLOD3-201ENST00000223127 PRPF40AO75400 957 aaKnown RBP15.81■□□□□ 0.12
PLOD3-201ENST00000223127 TMEM63CQ9P1W3 806 aa15.81■□□□□ 0.12
PLOD3-201ENST00000223127 TOGARAM1Q9Y4F4 1720 aa15.8■□□□□ 0.12
PLOD3-201ENST00000223127 CHAMP1Q96JM3 812 aa15.8■□□□□ 0.12
PLOD3-201ENST00000223127 STAP2Q9UGK3 403 aa15.8■□□□□ 0.12
PLOD3-201ENST00000223127 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.8■□□□□ 0.12
PLOD3-201ENST00000223127 CLASRPQ8N2M8 674 aaKnown RBP15.8■□□□□ 0.12
PLOD3-201ENST00000223127 ACSBG1Q96GR2 724 aa15.8■□□□□ 0.12
PLOD3-201ENST00000223127 PRDM4Q9UKN5 801 aa15.8■□□□□ 0.12
PLOD3-201ENST00000223127 G3BP1Q13283 466 aaKnown RBP eCLIP15.79■□□□□ 0.12
PLOD3-201ENST00000223127 DDB1Q16531 1140 aa15.79■□□□□ 0.12
PLOD3-201ENST00000223127 LRSAM1Q6UWE0 723 aa15.79■□□□□ 0.12
PLOD3-201ENST00000223127 CWC22Q9HCG8 908 aaKnown RBP15.79■□□□□ 0.12
PLOD3-201ENST00000223127 SPATA31A1Q5TZJ5 1347 aa15.79■□□□□ 0.12
PLOD3-201ENST00000223127 TNS2Q63HR2 1409 aa15.79■□□□□ 0.12
PLOD3-201ENST00000223127 NSFL1CQ9UNZ2 370 aaKnown RBP15.79■□□□□ 0.12
PLOD3-201ENST00000223127 CHMP3Q9Y3E7 222 aa15.79■□□□□ 0.12
PLOD3-201ENST00000223127 COL22A1Q8NFW1 1626 aaPredicted RBP15.79■□□□□ 0.12
PLOD3-201ENST00000223127 SYCE3A1L190 88 aa15.78■□□□□ 0.12
PLOD3-201ENST00000223127 SASH1O94885 1247 aa15.78■□□□□ 0.12
PLOD3-201ENST00000223127 AACSQ86V21 672 aa15.78■□□□□ 0.12
PLOD3-201ENST00000223127 ERC2O15083 957 aa15.77■□□□□ 0.12
PLOD3-201ENST00000223127 IFIT2P09913 472 aaKnown RBP15.77■□□□□ 0.12
PLOD3-201ENST00000223127 PI4K2BQ8TCG2 481 aa15.77■□□□□ 0.12
PLOD3-201ENST00000223127 C8orf37Q96NL8 207 aa15.77■□□□□ 0.12
PLOD3-201ENST00000223127 SLC4A9Q96Q91 983 aa15.77■□□□□ 0.12
PLOD3-201ENST00000223127 STARD3NLO95772 234 aa15.77■□□□□ 0.11
PLOD3-201ENST00000223127 MCM5P33992 734 aa15.77■□□□□ 0.11
PLOD3-201ENST00000223127 UBR2Q8IWV8 1755 aa15.77■□□□□ 0.11
PLOD3-201ENST00000223127 CSPP1Q1MSJ5 1256 aa15.76■□□□□ 0.11
PLOD3-201ENST00000223127 ERC1Q8IUD2 1116 aa15.76■□□□□ 0.11
PLOD3-201ENST00000223127 CCDC8Q9H0W5 538 aaPredicted RBP15.76■□□□□ 0.11
PLOD3-201ENST00000223127 CWC25Q9NXE8 425 aaPredicted RBP15.76■□□□□ 0.11
PLOD3-201ENST00000223127 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
PLOD3-201ENST00000223127 LAMB4A4D0S4 1761 aa15.76■□□□□ 0.11
PLOD3-201ENST00000223127 DYNC1I1O14576 645 aa15.76■□□□□ 0.11
PLOD3-201ENST00000223127 ST18O60284 1047 aa15.76■□□□□ 0.11
PLOD3-201ENST00000223127 BCL9O00512 1426 aa15.76■□□□□ 0.11
PLOD3-201ENST00000223127 REC8O95072 547 aa15.75■□□□□ 0.11
PLOD3-201ENST00000223127 CHMLP26374 656 aa15.75■□□□□ 0.11
PLOD3-201ENST00000223127 LMBR1LQ6UX01 489 aa15.75■□□□□ 0.11
PLOD3-201ENST00000223127 SASS6Q6UVJ0 657 aa15.75■□□□□ 0.11
PLOD3-201ENST00000223127 EAF2Q96CJ1 260 aaPredicted RBP15.75■□□□□ 0.11
PLOD3-201ENST00000223127 NGLY1Q96IV0 654 aa15.75■□□□□ 0.11
PLOD3-201ENST00000223127 ARFGEF2Q9Y6D5 1785 aa15.74■□□□□ 0.11
PLOD3-201ENST00000223127 PAPPAQ13219 1627 aa15.74■□□□□ 0.11
PLOD3-201ENST00000223127 MARCH10Q8NA82 808 aaPredicted RBP15.74■□□□□ 0.11
PLOD3-201ENST00000223127 ESYT1Q9BSJ8 1104 aa15.74■□□□□ 0.11
PLOD3-201ENST00000223127 TEX13AQ9BXU3 409 aaPredicted RBP15.74■□□□□ 0.11
PLOD3-201ENST00000223127 TLR7Q9NYK1 1049 aaKnown RBP15.74■□□□□ 0.11
PLOD3-201ENST00000223127 TUBGCP6Q96RT7 1819 aa15.74■□□□□ 0.11
PLOD3-201ENST00000223127 CASP7P55210 303 aa15.74■□□□□ 0.11
PLOD3-201ENST00000223127 ANO2Q9NQ90 1003 aa15.74■□□□□ 0.11
PLOD3-201ENST00000223127 PLCH1Q4KWH8 1693 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 AOX1Q06278 1338 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 FAM98CQ17RN3 349 aaKnown RBP15.73■□□□□ 0.11
PLOD3-201ENST00000223127 KIF6Q6ZMV9 814 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 ARID3AQ99856 593 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 PTPN12Q05209 780 aaKnown RBP15.73■□□□□ 0.11
PLOD3-201ENST00000223127 RNF214Q8ND24 703 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 CDCA7Q9BWT1 371 aaPredicted RBP15.73■□□□□ 0.11
PLOD3-201ENST00000223127 IL25Q9H293 177 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 ECHDC1Q9NTX5 307 aa15.73■□□□□ 0.11
PLOD3-201ENST00000223127 AFDNP55196 1824 aaKnown RBP15.72■□□□□ 0.11
PLOD3-201ENST00000223127 H7C1W4 665 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms