RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 CCDC191Q8NCU4 936 aa24.65■■□□□ 1.54
SNAPC2-201ENST00000221573 SPON1Q9HCB6 807 aa24.65■■□□□ 1.54
SNAPC2-201ENST00000221573 SUPT16HQ9Y5B9 1047 aaKnown RBP24.65■■□□□ 1.54
SNAPC2-201ENST00000221573 NTSR2O95665 410 aa24.64■■□□□ 1.53
SNAPC2-201ENST00000221573 POLD1P28340 1107 aa24.64■■□□□ 1.53
SNAPC2-201ENST00000221573 NBPF5PQ86XG9 351 aaPredicted RBP24.64■■□□□ 1.53
SNAPC2-201ENST00000221573 PANK1Q8TE04 598 aa24.64■■□□□ 1.53
SNAPC2-201ENST00000221573 CWC25Q9NXE8 425 aaPredicted RBP24.64■■□□□ 1.53
SNAPC2-201ENST00000221573 DDX60Q8IY21 1712 aaKnown RBP24.63■■□□□ 1.53
SNAPC2-201ENST00000221573 C20orf194Q5TEA3 1177 aa24.63■■□□□ 1.53
SNAPC2-201ENST00000221573 TMEM57Q8N5G2 664 aa24.63■■□□□ 1.53
SNAPC2-201ENST00000221573 IBTKQ9P2D0 1353 aaPredicted RBP24.63■■□□□ 1.53
SNAPC2-201ENST00000221573 ANKRD31Q8N7Z5 1873 aa24.63■■□□□ 1.53
SNAPC2-201ENST00000221573 LAMB2P55268 1798 aa24.62■■□□□ 1.53
SNAPC2-201ENST00000221573 ALDH1L1O75891 902 aa24.62■■□□□ 1.53
SNAPC2-201ENST00000221573 CCT4P50991 539 aaKnown RBP24.62■■□□□ 1.53
SNAPC2-201ENST00000221573 GCKRQ14397 625 aa24.62■■□□□ 1.53
SNAPC2-201ENST00000221573 PPP1R42Q7Z4L9 355 aa24.62■■□□□ 1.53
SNAPC2-201ENST00000221573 NUTM1Q86Y26 1132 aa24.62■■□□□ 1.53
SNAPC2-201ENST00000221573 CCDC24Q8N4L8 307 aa24.62■■□□□ 1.53
SNAPC2-201ENST00000221573 RNF123Q5XPI4 1314 aa24.62■■□□□ 1.53
SNAPC2-201ENST00000221573 INTS3Q68E01 1043 aaKnown RBP24.61■■□□□ 1.53
SNAPC2-201ENST00000221573 PRR5LQ6MZQ0 368 aa24.61■■□□□ 1.53
SNAPC2-201ENST00000221573 UTP14AQ9BVJ6 771 aaKnown RBP24.61■■□□□ 1.53
SNAPC2-201ENST00000221573 TRMT112Q9UI30 125 aaKnown RBP24.61■■□□□ 1.53
SNAPC2-201ENST00000221573 RTL5Q5HYW3 569 aaPredicted RBP24.61■■□□□ 1.53
SNAPC2-201ENST00000221573 SYNE4Q8N205 404 aa24.61■■□□□ 1.53
SNAPC2-201ENST00000221573 CNBD1Q8NA66 436 aa24.61■■□□□ 1.53
SNAPC2-201ENST00000221573 JARID2Q92833 1246 aaPredicted RBP24.61■■□□□ 1.53
SNAPC2-201ENST00000221573 TNRC6CQ9HCJ0 1690 aaKnown RBP24.6■■□□□ 1.53
SNAPC2-201ENST00000221573 KIF13BQ9NQT8 1826 aa24.6■■□□□ 1.53
SNAPC2-201ENST00000221573 ABCC12Q96J65 1359 aa24.6■■□□□ 1.53
SNAPC2-201ENST00000221573 FAM89AQ96GI7 184 aa24.6■■□□□ 1.53
SNAPC2-201ENST00000221573 NYXQ9GZU5 481 aa24.6■■□□□ 1.53
SNAPC2-201ENST00000221573 NPHP1O15259 732 aa24.59■■□□□ 1.53
SNAPC2-201ENST00000221573 ERFEQ4G0M1 354 aa24.59■■□□□ 1.53
SNAPC2-201ENST00000221573 TPTE2Q6XPS3 522 aa24.59■■□□□ 1.53
SNAPC2-201ENST00000221573 MS4A1P11836 297 aa24.58■■□□□ 1.53
SNAPC2-201ENST00000221573 ZBTB38Q8NAP3 1195 aaPredicted RBP24.58■■□□□ 1.53
SNAPC2-201ENST00000221573 LRP5O75197 1615 aa24.58■■□□□ 1.53
SNAPC2-201ENST00000221573 MYH3P11055 1940 aa24.58■■□□□ 1.52
SNAPC2-201ENST00000221573 PCCAP05165 728 aaPredicted RBP24.57■■□□□ 1.52
SNAPC2-201ENST00000221573 GTF2E1P29083 439 aaPredicted RBP24.57■■□□□ 1.52
SNAPC2-201ENST00000221573 PDE3AQ14432 1141 aa24.57■■□□□ 1.52
SNAPC2-201ENST00000221573 ITPRIPQ8IWB1 547 aa24.57■■□□□ 1.52
SNAPC2-201ENST00000221573 SH3TC1Q8TE82 1336 aa24.57■■□□□ 1.52
SNAPC2-201ENST00000221573 C10orf71Q711Q0 1435 aa24.57■■□□□ 1.52
SNAPC2-201ENST00000221573 GRM8O00222 908 aa24.56■■□□□ 1.52
SNAPC2-201ENST00000221573 UBE3BQ7Z3V4 1068 aa24.56■■□□□ 1.52
SNAPC2-201ENST00000221573 H7C1W4 665 aa24.56■■□□□ 1.52
SNAPC2-201ENST00000221573 ST5P78524 1137 aa24.56■■□□□ 1.52
SNAPC2-201ENST00000221573 C9orf78Q9NZ63 289 aaPredicted RBP24.56■■□□□ 1.52
SNAPC2-201ENST00000221573 COG6Q9Y2V7 657 aa24.56■■□□□ 1.52
SNAPC2-201ENST00000221573 CASP7P55210 303 aa24.55■■□□□ 1.52
SNAPC2-201ENST00000221573 USP44Q9H0E7 712 aa24.55■■□□□ 1.52
SNAPC2-201ENST00000221573 COL11A2P13942 1736 aaPredicted RBP24.55■■□□□ 1.52
SNAPC2-201ENST00000221573 KIAA1551Q9HCM1 1747 aa24.54■■□□□ 1.52
SNAPC2-201ENST00000221573 NBPF7P0C2Y1 421 aaPredicted RBP24.54■■□□□ 1.52
SNAPC2-201ENST00000221573 MEIS3Q99687 375 aa24.54■■□□□ 1.52
SNAPC2-201ENST00000221573 HCLS1P14317 486 aaPredicted RBP24.53■■□□□ 1.52
SNAPC2-201ENST00000221573 MVPQ14764 893 aaKnown RBP24.53■■□□□ 1.52
SNAPC2-201ENST00000221573 UTYO14607 1347 aa24.53■■□□□ 1.52
SNAPC2-201ENST00000221573 CDHR2Q9BYE9 1310 aa24.53■■□□□ 1.52
SNAPC2-201ENST00000221573 IRS4O14654 1257 aaPredicted RBP24.52■■□□□ 1.52
SNAPC2-201ENST00000221573 RIC1Q4ADV7 1423 aa24.52■■□□□ 1.52
SNAPC2-201ENST00000221573 C3orf67Q6ZVT6 689 aa24.51■■□□□ 1.51
SNAPC2-201ENST00000221573 KLHL34Q8N239 644 aa24.51■■□□□ 1.51
SNAPC2-201ENST00000221573 SLC10A5Q5PT55 438 aa24.5■■□□□ 1.51
SNAPC2-201ENST00000221573 SUCLG2Q96I99 432 aa24.5■■□□□ 1.51
SNAPC2-201ENST00000221573 PPP1R1BQ9UD71 204 aaPredicted RBP24.5■■□□□ 1.51
SNAPC2-201ENST00000221573 DLEC1Q9Y238 1755 aa24.49■■□□□ 1.51
SNAPC2-201ENST00000221573 BRIP1Q9BX63 1249 aa24.49■■□□□ 1.51
SNAPC2-201ENST00000221573 ZBTB7BO15156 539 aaPredicted RBP24.48■■□□□ 1.51
SNAPC2-201ENST00000221573 UBTFL1P0CB47 393 aaPredicted RBP24.48■■□□□ 1.51
SNAPC2-201ENST00000221573 CACNA1SQ13698 1873 aa24.48■■□□□ 1.51
SNAPC2-201ENST00000221573 KAZALD1Q96I82 304 aa24.47■■□□□ 1.51
SNAPC2-201ENST00000221573 DDX19BQ9UMR2 479 aa24.47■■□□□ 1.51
SNAPC2-201ENST00000221573 SRCAPQ6ZRS2 3230 aa24.47■■□□□ 1.51
SNAPC2-201ENST00000221573 TAF1P21675 1872 aa24.47■■□□□ 1.51
SNAPC2-201ENST00000221573 PDE8AO60658 829 aa24.46■■□□□ 1.51
SNAPC2-201ENST00000221573 IRX6P78412 446 aaPredicted RBP24.46■■□□□ 1.51
SNAPC2-201ENST00000221573 EPHA10Q5JZY3 1008 aa24.46■■□□□ 1.51
SNAPC2-201ENST00000221573 CRBNQ96SW2 442 aa24.46■■□□□ 1.51
SNAPC2-201ENST00000221573 GNAI3P08754 354 aa24.45■■□□□ 1.51
SNAPC2-201ENST00000221573 NLRP3Q96P20 1036 aa24.45■■□□□ 1.51
SNAPC2-201ENST00000221573 PLA2G12BQ9BX93 195 aa24.45■■□□□ 1.51
SNAPC2-201ENST00000221573 PDE6BP35913 854 aa24.45■■□□□ 1.5
SNAPC2-201ENST00000221573 FHDC1Q9C0D6 1143 aaPredicted RBP24.45■■□□□ 1.5
SNAPC2-201ENST00000221573 CD2APQ9Y5K6 639 aa24.45■■□□□ 1.5
SNAPC2-201ENST00000221573 BRCA1P38398 1863 aaKnown RBP24.44■■□□□ 1.5
SNAPC2-201ENST00000221573 KLRG2A4D1S0 409 aaPredicted RBP24.44■■□□□ 1.5
SNAPC2-201ENST00000221573 CHRNA5P30532 468 aa24.44■■□□□ 1.5
SNAPC2-201ENST00000221573 CTSWP56202 376 aa24.44■■□□□ 1.5
SNAPC2-201ENST00000221573 FOXO4P98177 505 aa24.44■■□□□ 1.5
SNAPC2-201ENST00000221573 LRRFIP2Q9Y608 721 aaKnown RBP24.44■■□□□ 1.5
SNAPC2-201ENST00000221573 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
SNAPC2-201ENST00000221573 CCDC85AQ96PX6 553 aaPredicted RBP24.43■■□□□ 1.5
SNAPC2-201ENST00000221573 BICC1Q9H694 974 aaKnown RBP24.43■■□□□ 1.5
SNAPC2-201ENST00000221573 C1orf115Q9H7X2 142 aa24.43■■□□□ 1.5
SNAPC2-201ENST00000221573 COL4A1P02462 1669 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms