RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 HDAC5Q9UQL6 1122 aa18.72■□□□□ 0.59
PAF1-201ENST00000221265 PLEKHM2Q8IWE5 1019 aa18.72■□□□□ 0.59
PAF1-201ENST00000221265 FBXO41Q8TF61 875 aa18.72■□□□□ 0.59
PAF1-201ENST00000221265 TBC1D32Q96NH3 1257 aa18.72■□□□□ 0.59
PAF1-201ENST00000221265 BCL11BQ9C0K0 894 aaPredicted RBP18.72■□□□□ 0.59
PAF1-201ENST00000221265 NFKBIBQ15653 356 aa18.71■□□□□ 0.59
PAF1-201ENST00000221265 LRRCC1Q9C099 1032 aa18.71■□□□□ 0.59
PAF1-201ENST00000221265 RGS17Q9UGC6 210 aaPredicted RBP18.71■□□□□ 0.59
PAF1-201ENST00000221265 CCNL1Q9UK58 526 aaPredicted RBP18.71■□□□□ 0.59
PAF1-201ENST00000221265 TRIM28Q13263 835 aaKnown RBP18.7■□□□□ 0.58
PAF1-201ENST00000221265 FAM196AQ6ZSG2 479 aa18.7■□□□□ 0.58
PAF1-201ENST00000221265 KLHDC4Q8TBB5 520 aa18.7■□□□□ 0.58
PAF1-201ENST00000221265 TRIM37O94972 964 aa18.7■□□□□ 0.58
PAF1-201ENST00000221265 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
PAF1-201ENST00000221265 UPF2Q9HAU5 1272 aaKnown RBP18.7■□□□□ 0.58
PAF1-201ENST00000221265 IL1RAPL2Q9NP60 686 aa18.7■□□□□ 0.58
PAF1-201ENST00000221265 COL15A1P39059 1388 aa18.69■□□□□ 0.58
PAF1-201ENST00000221265 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
PAF1-201ENST00000221265 FOXO4P98177 505 aa18.69■□□□□ 0.58
PAF1-201ENST00000221265 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
PAF1-201ENST00000221265 CAMTA2O94983 1202 aa18.69■□□□□ 0.58
PAF1-201ENST00000221265 RABL6Q3YEC7 729 aaPredicted RBP18.69■□□□□ 0.58
PAF1-201ENST00000221265 FAM89AQ96GI7 184 aa18.69■□□□□ 0.58
PAF1-201ENST00000221265 AMIGO3Q86WK7 504 aa18.68■□□□□ 0.58
PAF1-201ENST00000221265 UBN2Q6ZU65 1347 aa18.68■□□□□ 0.58
PAF1-201ENST00000221265 CNTNAP4Q9C0A0 1308 aa18.68■□□□□ 0.58
PAF1-201ENST00000221265 BCORQ6W2J9 1755 aa18.67■□□□□ 0.58
PAF1-201ENST00000221265 LMBR1LQ6UX01 489 aa18.67■□□□□ 0.58
PAF1-201ENST00000221265 RHPN1Q8TCX5 695 aa18.67■□□□□ 0.58
PAF1-201ENST00000221265 LRRC4BQ9NT99 713 aa18.67■□□□□ 0.58
PAF1-201ENST00000221265 RXRBP28702 533 aa18.67■□□□□ 0.58
PAF1-201ENST00000221265 SIL1Q9H173 461 aa18.67■□□□□ 0.58
PAF1-201ENST00000221265 RFX5P48382 616 aaPredicted RBP18.66■□□□□ 0.58
PAF1-201ENST00000221265 HSP90AB3PQ58FF7 597 aa18.66■□□□□ 0.58
PAF1-201ENST00000221265 TSHZ3Q63HK5 1081 aa18.66■□□□□ 0.58
PAF1-201ENST00000221265 POTEAQ6S8J7 498 aa18.66■□□□□ 0.58
PAF1-201ENST00000221265 ZNF34Q8IZ26 560 aa18.66■□□□□ 0.58
PAF1-201ENST00000221265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.66■□□□□ 0.58
PAF1-201ENST00000221265 RAB11FIP3O75154 756 aa18.65■□□□□ 0.58
PAF1-201ENST00000221265 PCCAP05165 728 aaPredicted RBP18.65■□□□□ 0.58
PAF1-201ENST00000221265 GSPT1P15170 499 aaKnown RBP18.65■□□□□ 0.58
PAF1-201ENST00000221265 OS9Q13438 667 aaPredicted RBP18.65■□□□□ 0.58
PAF1-201ENST00000221265 BECN1Q14457 450 aa18.65■□□□□ 0.58
PAF1-201ENST00000221265 C4BP0C0L5 1744 aa18.65■□□□□ 0.58
PAF1-201ENST00000221265 ZBTB38Q8NAP3 1195 aaPredicted RBP18.65■□□□□ 0.58
PAF1-201ENST00000221265 SALL3Q9BXA9 1300 aa18.65■□□□□ 0.58
PAF1-201ENST00000221265 GNPATO15228 680 aa18.64■□□□□ 0.57
PAF1-201ENST00000221265 BMP2KLQ5H9B9 411 aa18.64■□□□□ 0.57
PAF1-201ENST00000221265 RC3H1Q5TC82 1133 aaKnown RBP18.64■□□□□ 0.57
PAF1-201ENST00000221265 KIF1BPQ96EK5 621 aa18.64■□□□□ 0.57
PAF1-201ENST00000221265 CHMP3Q9Y3E7 222 aa18.64■□□□□ 0.57
PAF1-201ENST00000221265 MYH3P11055 1940 aa18.64■□□□□ 0.57
PAF1-201ENST00000221265 PTPN12Q05209 780 aaKnown RBP18.64■□□□□ 0.57
PAF1-201ENST00000221265 SASH1O94885 1247 aa18.63■□□□□ 0.57
PAF1-201ENST00000221265 PDE1AP54750 535 aa18.63■□□□□ 0.57
PAF1-201ENST00000221265 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
PAF1-201ENST00000221265 TRMT112Q9UI30 125 aaKnown RBP18.63■□□□□ 0.57
PAF1-201ENST00000221265 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
PAF1-201ENST00000221265 RPS6KA4O75676 772 aa18.62■□□□□ 0.57
PAF1-201ENST00000221265 HSP90AB4PQ58FF6 505 aa18.62■□□□□ 0.57
PAF1-201ENST00000221265 TTC22Q5TAA0 569 aa18.62■□□□□ 0.57
PAF1-201ENST00000221265 TUBGCP6Q96RT7 1819 aa18.62■□□□□ 0.57
PAF1-201ENST00000221265 SUSD4Q5VX71 490 aa18.62■□□□□ 0.57
PAF1-201ENST00000221265 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
PAF1-201ENST00000221265 SCN7AQ01118 1682 aa18.62■□□□□ 0.57
PAF1-201ENST00000221265 MFAP1P55081 439 aaKnown RBP18.61■□□□□ 0.57
PAF1-201ENST00000221265 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.571e-6■□□□□ 10.1
PAF1-201ENST00000221265 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
PAF1-201ENST00000221265 SRP68Q9UHB9 627 aaKnown RBP18.61■□□□□ 0.57
PAF1-201ENST00000221265 C4AP0C0L4 1744 aa18.61■□□□□ 0.57
PAF1-201ENST00000221265 MX1P20591 662 aa18.61■□□□□ 0.57
PAF1-201ENST00000221265 NIP7Q9Y221 180 aaKnown RBP eCLIP18.61■□□□□ 0.57
PAF1-201ENST00000221265 ZNF594Q96JF6 807 aaPredicted RBP18.6■□□□□ 0.57
PAF1-201ENST00000221265 TBC1D2Q9BYX2 928 aa18.6■□□□□ 0.57
PAF1-201ENST00000221265 C22orf23Q9BZE7 217 aa18.6■□□□□ 0.57
PAF1-201ENST00000221265 BCL2L12Q9HB09 334 aa18.6■□□□□ 0.57
PAF1-201ENST00000221265 CDHR2Q9BYE9 1310 aa18.6■□□□□ 0.57
PAF1-201ENST00000221265 UBR3Q6ZT12 1888 aa18.59■□□□□ 0.57
PAF1-201ENST00000221265 PROM2Q8N271 834 aa18.59■□□□□ 0.57
PAF1-201ENST00000221265 PLA2G12BQ9BX93 195 aa18.59■□□□□ 0.57
PAF1-201ENST00000221265 OSBPL3Q9H4L5 887 aa18.59■□□□□ 0.57
PAF1-201ENST00000221265 RTCBQ9Y3I0 505 aaKnown RBP18.59■□□□□ 0.57
PAF1-201ENST00000221265 IRS4O14654 1257 aaPredicted RBP18.59■□□□□ 0.57
PAF1-201ENST00000221265 PHF14O94880 888 aa18.59■□□□□ 0.57
PAF1-201ENST00000221265 FRAT2O75474 233 aaPredicted RBP18.58■□□□□ 0.57
PAF1-201ENST00000221265 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.57
PAF1-201ENST00000221265 ERC1Q8IUD2 1116 aa18.58■□□□□ 0.57
PAF1-201ENST00000221265 ARHGEF1Q92888 912 aaKnown RBP18.58■□□□□ 0.57
PAF1-201ENST00000221265 DDX60Q8IY21 1712 aaKnown RBP18.58■□□□□ 0.56
PAF1-201ENST00000221265 STAP2Q9UGK3 403 aa18.58■□□□□ 0.56
PAF1-201ENST00000221265 CSF1RP07333 972 aa18.57■□□□□ 0.56
PAF1-201ENST00000221265 HCLS1P14317 486 aaPredicted RBP18.57■□□□□ 0.56
PAF1-201ENST00000221265 SDSP20132 328 aa18.57■□□□□ 0.56
PAF1-201ENST00000221265 AK7Q96M32 723 aa18.57■□□□□ 0.56
PAF1-201ENST00000221265 NARFQ9UHQ1 456 aa18.57■□□□□ 0.56
PAF1-201ENST00000221265 ZNF652Q9Y2D9 606 aa18.57■□□□□ 0.56
PAF1-201ENST00000221265 TBC1D9BQ66K14 1250 aa18.56■□□□□ 0.56
PAF1-201ENST00000221265 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
PAF1-201ENST00000221265 BICDL1Q6ZP65 573 aa18.56■□□□□ 0.56
PAF1-201ENST00000221265 CLASRPQ8N2M8 674 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms