RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 PPP1R42Q7Z4L9 355 aa30.03■■■□□ 2.4
HOMER3-201ENST00000221222 NYXQ9GZU5 481 aa30.03■■■□□ 2.4
HOMER3-201ENST00000221222 PXDNLA1KZ92 1463 aa30.02■■■□□ 2.4
HOMER3-201ENST00000221222 IGKV5-2P06315 115 aa30.02■■■□□ 2.4
HOMER3-201ENST00000221222 PRR5LQ6MZQ0 368 aa30.02■■■□□ 2.4
HOMER3-201ENST00000221222 TPTE2Q6XPS3 522 aa30.02■■■□□ 2.4
HOMER3-201ENST00000221222 CNBD1Q8NA66 436 aa30.02■■■□□ 2.4
HOMER3-201ENST00000221222 CCDC191Q8NCU4 936 aa30.02■■■□□ 2.4
HOMER3-201ENST00000221222 LINS1Q8NG48 757 aa30.02■■■□□ 2.4
HOMER3-201ENST00000221222 RNF123Q5XPI4 1314 aa30.01■■■□□ 2.39
HOMER3-201ENST00000221222 IPO8O15397 1037 aaKnown RBP30.01■■■□□ 2.39
HOMER3-201ENST00000221222 NTSR2O95665 410 aa30.01■■■□□ 2.39
HOMER3-201ENST00000221222 API5Q9BZZ5 524 aaKnown RBP30.01■■■□□ 2.39
HOMER3-201ENST00000221222 BEND3Q5T5X7 828 aa30■■■□□ 2.39
HOMER3-201ENST00000221222 UTP14AQ9BVJ6 771 aaKnown RBP30■■■□□ 2.39
HOMER3-201ENST00000221222 ANKRD31Q8N7Z5 1873 aa29.99■■■□□ 2.39
HOMER3-201ENST00000221222 FAM177BA6PVY3 158 aa29.99■■■□□ 2.39
HOMER3-201ENST00000221222 NEURL1BA8MQ27 555 aa29.99■■■□□ 2.39
HOMER3-201ENST00000221222 FRAT1Q92837 279 aaPredicted RBP29.98■■■□□ 2.39
HOMER3-201ENST00000221222 CWC25Q9NXE8 425 aaPredicted RBP29.98■■■□□ 2.39
HOMER3-201ENST00000221222 CWF19L2Q2TBE0 894 aaKnown RBP29.97■■■□□ 2.39
HOMER3-201ENST00000221222 ATF7IPQ6VMQ6 1270 aa29.97■■■□□ 2.39
HOMER3-201ENST00000221222 ST5P78524 1137 aa29.96■■■□□ 2.39
HOMER3-201ENST00000221222 ZKSCAN2Q63HK3 967 aa29.96■■■□□ 2.39
HOMER3-201ENST00000221222 SLC4A10Q6U841 1118 aa29.96■■■□□ 2.39
HOMER3-201ENST00000221222 TRMT112Q9UI30 125 aaKnown RBP29.96■■■□□ 2.39
HOMER3-201ENST00000221222 RIC1Q4ADV7 1423 aa29.96■■■□□ 2.39
HOMER3-201ENST00000221222 NPHP1O15259 732 aa29.95■■■□□ 2.39
HOMER3-201ENST00000221222 KIAA1551Q9HCM1 1747 aa29.95■■■□□ 2.39
HOMER3-201ENST00000221222 TRIM27P14373 513 aa29.94■■■□□ 2.38
HOMER3-201ENST00000221222 GTF2E1P29083 439 aaPredicted RBP29.94■■■□□ 2.38
HOMER3-201ENST00000221222 NUTM1Q86Y26 1132 aa29.94■■■□□ 2.38
HOMER3-201ENST00000221222 SRCIN1Q9C0H9 1055 aa29.94■■■□□ 2.38
HOMER3-201ENST00000221222 ABCC4O15439 1325 aa29.94■■■□□ 2.38
HOMER3-201ENST00000221222 SH3TC1Q8TE82 1336 aa29.94■■■□□ 2.38
HOMER3-201ENST00000221222 LAMB2P55268 1798 aa29.93■■■□□ 2.38
HOMER3-201ENST00000221222 ALDH1L1O75891 902 aa29.93■■■□□ 2.38
HOMER3-201ENST00000221222 GCKRQ14397 625 aa29.93■■■□□ 2.38
HOMER3-201ENST00000221222 ERFEQ4G0M1 354 aa29.93■■■□□ 2.38
HOMER3-201ENST00000221222 BRIP1Q9BX63 1249 aa29.93■■■□□ 2.38
HOMER3-201ENST00000221222 ABCC12Q96J65 1359 aa29.93■■■□□ 2.38
HOMER3-201ENST00000221222 DDX60Q8IY21 1712 aaKnown RBP29.92■■■□□ 2.38
HOMER3-201ENST00000221222 PCCAP05165 728 aaPredicted RBP29.92■■■□□ 2.38
HOMER3-201ENST00000221222 C1QTNF8P60827 252 aa29.92■■■□□ 2.38
HOMER3-201ENST00000221222 CCDC24Q8N4L8 307 aa29.92■■■□□ 2.38
HOMER3-201ENST00000221222 ZBTB38Q8NAP3 1195 aaPredicted RBP29.92■■■□□ 2.38
HOMER3-201ENST00000221222 SLC10A5Q5PT55 438 aa29.91■■■□□ 2.38
HOMER3-201ENST00000221222 TNRC6CQ9HCJ0 1690 aaKnown RBP29.91■■■□□ 2.38
HOMER3-201ENST00000221222 CCT4P50991 539 aaKnown RBP29.9■■■□□ 2.38
HOMER3-201ENST00000221222 TGFB2P61812 414 aa29.9■■■□□ 2.38
HOMER3-201ENST00000221222 FAM89AQ96GI7 184 aa29.9■■■□□ 2.38
HOMER3-201ENST00000221222 DLEC1Q9Y238 1755 aa29.89■■■□□ 2.37
HOMER3-201ENST00000221222 A0A0G2JLW4 131 aa29.89■■■□□ 2.37
HOMER3-201ENST00000221222 SYNE4Q8N205 404 aa29.89■■■□□ 2.37
HOMER3-201ENST00000221222 TNNQ9UQP3 1299 aa29.89■■■□□ 2.37
HOMER3-201ENST00000221222 KLRG2A4D1S0 409 aaPredicted RBP29.88■■■□□ 2.37
HOMER3-201ENST00000221222 H7C1W4 665 aa29.88■■■□□ 2.37
HOMER3-201ENST00000221222 PDE6BP35913 854 aa29.88■■■□□ 2.37
HOMER3-201ENST00000221222 INTS3Q68E01 1043 aaKnown RBP29.88■■■□□ 2.37
HOMER3-201ENST00000221222 CDHR2Q9BYE9 1310 aa29.87■■■□□ 2.37
HOMER3-201ENST00000221222 COL11A2P13942 1736 aaPredicted RBP29.87■■■□□ 2.37
HOMER3-201ENST00000221222 PDZRN3Q9UPQ7 1066 aa29.87■■■□□ 2.37
HOMER3-201ENST00000221222 ZNF526Q8TF50 670 aaPredicted RBP29.86■■■□□ 2.37
HOMER3-201ENST00000221222 CASP7P55210 303 aa29.85■■■□□ 2.37
HOMER3-201ENST00000221222 RTL5Q5HYW3 569 aaPredicted RBP29.85■■■□□ 2.37
HOMER3-201ENST00000221222 CLUAP1Q96AJ1 413 aa29.85■■■□□ 2.37
HOMER3-201ENST00000221222 GRM8O00222 908 aa29.84■■■□□ 2.37
HOMER3-201ENST00000221222 HCLS1P14317 486 aaPredicted RBP29.84■■■□□ 2.37
HOMER3-201ENST00000221222 HSP90B1P14625 803 aaKnown RBP29.84■■■□□ 2.37
HOMER3-201ENST00000221222 DPEP1P16444 411 aa29.84■■■□□ 2.37
HOMER3-201ENST00000221222 DZIP1LQ8IYY4 767 aaKnown RBP29.84■■■□□ 2.37
HOMER3-201ENST00000221222 BCS1LQ9Y276 419 aa29.84■■■□□ 2.37
HOMER3-201ENST00000221222 BRCA1P38398 1863 aaKnown RBP29.84■■■□□ 2.37
HOMER3-201ENST00000221222 IRS4O14654 1257 aaPredicted RBP29.83■■■□□ 2.37
HOMER3-201ENST00000221222 UBE3BQ7Z3V4 1068 aa29.83■■■□□ 2.37
HOMER3-201ENST00000221222 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.83■■■□□ 2.37
HOMER3-201ENST00000221222 UTYO14607 1347 aa29.83■■■□□ 2.37
HOMER3-201ENST00000221222 MYH3P11055 1940 aa29.82■■■□□ 2.36
HOMER3-201ENST00000221222 MS4A1P11836 297 aa29.82■■■□□ 2.36
HOMER3-201ENST00000221222 CRY2Q49AN0 593 aa29.82■■■□□ 2.36
HOMER3-201ENST00000221222 FTSJ3Q8IY81 847 aaKnown RBP29.82■■■□□ 2.36
HOMER3-201ENST00000221222 JARID2Q92833 1246 aaPredicted RBP29.82■■■□□ 2.36
HOMER3-201ENST00000221222 NLRP3Q96P20 1036 aa29.82■■■□□ 2.36
HOMER3-201ENST00000221222 C9orf78Q9NZ63 289 aaPredicted RBP29.82■■■□□ 2.36
HOMER3-201ENST00000221222 C2CD5Q86YS7 1000 aa29.81■■■□□ 2.36
HOMER3-201ENST00000221222 H0YIN7 160 aa29.8■■■□□ 2.36
HOMER3-201ENST00000221222 PLIN1O60240 522 aa29.8■■■□□ 2.36
HOMER3-201ENST00000221222 RLBP1P12271 317 aa29.8■■■□□ 2.36
HOMER3-201ENST00000221222 CHRNA5P30532 468 aa29.8■■■□□ 2.36
HOMER3-201ENST00000221222 SRGNP10124 158 aa29.79■■■□□ 2.36
HOMER3-201ENST00000221222 KCNA3P22001 575 aa29.79■■■□□ 2.36
HOMER3-201ENST00000221222 C3orf67Q6ZVT6 689 aa29.79■■■□□ 2.36
HOMER3-201ENST00000221222 TMEM57Q8N5G2 664 aa29.79■■■□□ 2.36
HOMER3-201ENST00000221222 PLA2G12BQ9BX93 195 aa29.79■■■□□ 2.36
HOMER3-201ENST00000221222 USP44Q9H0E7 712 aa29.79■■■□□ 2.36
HOMER3-201ENST00000221222 PDE8AO60658 829 aa29.78■■■□□ 2.36
HOMER3-201ENST00000221222 GPBP1L1Q9HC44 474 aaPredicted RBP29.78■■■□□ 2.36
HOMER3-201ENST00000221222 NBPF7P0C2Y1 421 aaPredicted RBP29.77■■■□□ 2.36
HOMER3-201ENST00000221222 SF3B3Q15393 1217 aaKnown RBP29.77■■■□□ 2.36
HOMER3-201ENST00000221222 MASTLQ96GX5 879 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms