RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 EVI5LQ96CN4 794 aa36.1■■■■□ 3.37
PABPN1-201ENST00000216727 IL25Q9H293 177 aa36.1■■■■□ 3.37
PABPN1-201ENST00000216727 TRIM28Q13263 835 aaKnown RBP36.09■■■■□ 3.37
PABPN1-201ENST00000216727 TCIRG1Q13488 830 aa36.08■■■■□ 3.37
PABPN1-201ENST00000216727 CCDC8Q9H0W5 538 aaPredicted RBP36.08■■■■□ 3.37
PABPN1-201ENST00000216727 KIF6Q6ZMV9 814 aa36.06■■■■□ 3.36
PABPN1-201ENST00000216727 IL27Q8NEV9 243 aa36.05■■■■□ 3.36
PABPN1-201ENST00000216727 NWD2Q9ULI1 1742 aa36.05■■■■□ 3.36
PABPN1-201ENST00000216727 RUFY2Q8WXA3 655 aa36.05■■■■□ 3.36
PABPN1-201ENST00000216727 TLR7Q9NYK1 1049 aaKnown RBP36.05■■■■□ 3.36
PABPN1-201ENST00000216727 RAD50Q92878 1312 aa36.04■■■■□ 3.36
PABPN1-201ENST00000216727 SLC4A9Q96Q91 983 aa36.04■■■■□ 3.36
PABPN1-201ENST00000216727 CYP19A1P11511 503 aaPredicted RBP36.03■■■■□ 3.36
PABPN1-201ENST00000216727 HSPA4P34932 840 aa36.03■■■■□ 3.36
PABPN1-201ENST00000216727 DIAPH3Q9NSV4 1193 aa36.03■■■■□ 3.36
PABPN1-201ENST00000216727 PALD1Q9ULE6 856 aa36.03■■■■□ 3.36
PABPN1-201ENST00000216727 DDB1Q16531 1140 aa36.03■■■■□ 3.36
PABPN1-201ENST00000216727 TNNI3KQ59H18 835 aa36.02■■■■□ 3.36
PABPN1-201ENST00000216727 FPGT-TNNI3KV9GXZ4 949 aa36.02■■■■□ 3.36
PABPN1-201ENST00000216727 DOT1LQ8TEK3 1739 aa36.02■■■■□ 3.36
PABPN1-201ENST00000216727 SPATA31A5Q5VU36 1347 aa36.02■■■■□ 3.36
PABPN1-201ENST00000216727 SPATA31A7Q8IWB4 1347 aa36.02■■■■□ 3.36
PABPN1-201ENST00000216727 TFCP2Q12800 502 aa36.01■■■■□ 3.36
PABPN1-201ENST00000216727 LSG1Q9H089 658 aaKnown RBP36.01■■■■□ 3.36
PABPN1-201ENST00000216727 SLIT2O94813 1529 aa36.01■■■■□ 3.36
PABPN1-201ENST00000216727 PRIM1P49642 420 aaKnown RBP36.01■■■■□ 3.35
PABPN1-201ENST00000216727 CWC27Q6UX04 472 aaKnown RBP36.01■■■■□ 3.35
PABPN1-201ENST00000216727 MAP3K15Q6ZN16 1313 aa36.01■■■■□ 3.35
PABPN1-201ENST00000216727 HIP1O00291 1037 aa36■■■■□ 3.35
PABPN1-201ENST00000216727 SYTL4Q96C24 671 aaPredicted RBP36■■■■□ 3.35
PABPN1-201ENST00000216727 MCM2P49736 904 aa36■■■■□ 3.35
PABPN1-201ENST00000216727 ZNF330Q9Y3S2 320 aaPredicted RBP36■■■■□ 3.35
PABPN1-201ENST00000216727 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.99■■■■□ 3.35
PABPN1-201ENST00000216727 NEK4P51957 841 aa35.98■■■■□ 3.35
PABPN1-201ENST00000216727 RAB3GAP1Q15042 981 aa35.98■■■■□ 3.35
PABPN1-201ENST00000216727 BARGINQ6ZT62 677 aa35.98■■■■□ 3.35
PABPN1-201ENST00000216727 KIAA1211Q6ZU35 1233 aa35.98■■■■□ 3.35
PABPN1-201ENST00000216727 KAT6BQ8WYB5 2073 aa35.98■■■■□ 3.35
PABPN1-201ENST00000216727 MCM4P33991 863 aa35.98■■■■□ 3.35
PABPN1-201ENST00000216727 PIP4K2BP78356 416 aa35.98■■■■□ 3.35
PABPN1-201ENST00000216727 GIGYF2Q6Y7W6 1299 aaKnown RBP35.98■■■■□ 3.35
PABPN1-201ENST00000216727 DBNLQ9UJU6 430 aaKnown RBP35.98■■■■□ 3.35
PABPN1-201ENST00000216727 CHMP3Q9Y3E7 222 aa35.98■■■■□ 3.35
PABPN1-201ENST00000216727 NUTM2BA6NNL0 878 aaPredicted RBP35.96■■■■□ 3.35
PABPN1-201ENST00000216727 NUTM2EB1AL46 878 aaPredicted RBP35.96■■■■□ 3.35
PABPN1-201ENST00000216727 ATP5JP18859 108 aa35.96■■■■□ 3.35
PABPN1-201ENST00000216727 NUTM2AQ8IVF1 878 aaPredicted RBP35.96■■■■□ 3.35
PABPN1-201ENST00000216727 PCCAP05165 728 aaPredicted RBP35.96■■■■□ 3.35
PABPN1-201ENST00000216727 FOXD4L1Q9NU39 408 aa35.96■■■■□ 3.35
PABPN1-201ENST00000216727 BOLA2Q9H3K6 86 aa35.95■■■■□ 3.35
PABPN1-201ENST00000216727 GPR108Q9NPR9 543 aa35.95■■■■□ 3.35
PABPN1-201ENST00000216727 HSP90AB3PQ58FF7 597 aa35.95■■■■□ 3.34
PABPN1-201ENST00000216727 ATG9AQ7Z3C6 839 aa35.95■■■■□ 3.34
PABPN1-201ENST00000216727 PLA2G12BQ9BX93 195 aa35.95■■■■□ 3.34
PABPN1-201ENST00000216727 IL15P40933 162 aaPredicted RBP35.94■■■■□ 3.34
PABPN1-201ENST00000216727 GSE1Q14687 1217 aa35.94■■■■□ 3.34
PABPN1-201ENST00000216727 ZBTB38Q8NAP3 1195 aaPredicted RBP35.93■■■■□ 3.34
PABPN1-201ENST00000216727 SNRKQ9NRH2 765 aa35.93■■■■□ 3.34
PABPN1-201ENST00000216727 CIAO1O76071 339 aa35.92■■■■□ 3.34
PABPN1-201ENST00000216727 CWC22Q9HCG8 908 aaKnown RBP35.92■■■■□ 3.34
PABPN1-201ENST00000216727 ZBTB1Q9Y2K1 713 aa35.92■■■■□ 3.34
PABPN1-201ENST00000216727 IL6STP40189 918 aaPredicted RBP35.91■■■■□ 3.34
PABPN1-201ENST00000216727 MARCH10Q8NA82 808 aaPredicted RBP35.91■■■■□ 3.34
PABPN1-201ENST00000216727 TNPO1Q92973 898 aaKnown RBP35.91■■■■□ 3.34
PABPN1-201ENST00000216727 EYA2O00167 538 aa35.9■■■■□ 3.34
PABPN1-201ENST00000216727 FBXO3Q9UK99 471 aa35.89■■■■□ 3.34
PABPN1-201ENST00000216727 CDHR2Q9BYE9 1310 aa35.88■■■■□ 3.33
PABPN1-201ENST00000216727 ERVV-1B6SEH8 477 aa35.88■■■■□ 3.33
PABPN1-201ENST00000216727 HLFQ16534 295 aa35.88■■■■□ 3.33
PABPN1-201ENST00000216727 DBNDD2Q9BQY9 259 aa35.88■■■■□ 3.33
PABPN1-201ENST00000216727 FSD1Q9BTV5 496 aa35.88■■■■□ 3.33
PABPN1-201ENST00000216727 SNX14Q9Y5W7 946 aa35.87■■■■□ 3.33
PABPN1-201ENST00000216727 RFX7Q2KHR2 1363 aa35.87■■■■□ 3.33
PABPN1-201ENST00000216727 ANKRD36CQ5JPF3 1778 aa35.86■■■■□ 3.33
PABPN1-201ENST00000216727 NLRP10Q86W26 655 aa35.86■■■■□ 3.33
PABPN1-201ENST00000216727 ARXQ96QS3 562 aa35.86■■■■□ 3.33
PABPN1-201ENST00000216727 CSF1RP07333 972 aa35.86■■■■□ 3.33
PABPN1-201ENST00000216727 TMX3Q96JJ7 454 aa35.86■■■■□ 3.33
PABPN1-201ENST00000216727 DDX11L8A8MPP1 907 aa35.85■■■■□ 3.33
PABPN1-201ENST00000216727 NMIQ13287 307 aaPredicted RBP35.85■■■■□ 3.33
PABPN1-201ENST00000216727 CCDC57Q2TAC2 916 aa35.85■■■■□ 3.33
PABPN1-201ENST00000216727 FAM89AQ96GI7 184 aa35.85■■■■□ 3.33
PABPN1-201ENST00000216727 CCDC9Q9Y3X0 531 aaKnown RBP35.85■■■■□ 3.33
PABPN1-201ENST00000216727 KCNB2Q92953 911 aa35.84■■■■□ 3.33
PABPN1-201ENST00000216727 GBP4Q96PP9 640 aa35.84■■■■□ 3.33
PABPN1-201ENST00000216727 NUCB2P80303 420 aa35.84■■■■□ 3.33
PABPN1-201ENST00000216727 FAM227BQ96M60 508 aa35.84■■■■□ 3.33
PABPN1-201ENST00000216727 HAUS7Q99871 368 aa35.84■■■■□ 3.33
PABPN1-201ENST00000216727 CCDC171Q6TFL3 1326 aa35.84■■■■□ 3.33
PABPN1-201ENST00000216727 PTH1RQ03431 593 aa35.83■■■■□ 3.33
PABPN1-201ENST00000216727 CICQ96RK0 1608 aaPredicted RBP35.83■■■■□ 3.33
PABPN1-201ENST00000216727 LRRC24Q50LG9 513 aa35.83■■■■□ 3.33
PABPN1-201ENST00000216727 ZNF594Q96JF6 807 aaPredicted RBP35.83■■■■□ 3.33
PABPN1-201ENST00000216727 CUL4AQ13619 759 aa35.82■■■■□ 3.32
PABPN1-201ENST00000216727 CLEC17AQ6ZS10 378 aa35.82■■■■□ 3.32
PABPN1-201ENST00000216727 UPF3BQ9BZI7 483 aaKnown RBP35.82■■■■□ 3.32
PABPN1-201ENST00000216727 UBAP1LF5GYI3 381 aa35.81■■■■□ 3.32
PABPN1-201ENST00000216727 RASEFQ8IZ41 740 aa35.81■■■■□ 3.32
PABPN1-201ENST00000216727 DZIP3Q86Y13 1208 aaKnown RBP35.81■■■■□ 3.32
PABPN1-201ENST00000216727 ACSBG1Q96GR2 724 aa35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms