RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 LMBR1LQ6UX01 489 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 ASAP1Q9ULH1 1129 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 TFCP2Q12800 502 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 CWC25Q9NXE8 425 aaPredicted RBP9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 COL15A1P39059 1388 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 COL14A1Q05707 1796 aaKnown RBP9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 RUFY2Q8WXA3 655 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 PIGBQ92521 554 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 CWC22Q9HCG8 908 aaKnown RBP9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 SNX14Q9Y5W7 946 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 MCM2P49736 904 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 NUCB2P80303 420 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 IL17RAQ96F46 866 aa9.66□□□□□ -0.86
HMGXB4-201ENST00000216106 PTH1RQ03431 593 aa9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 FAM227BQ96M60 508 aa9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 COL16A1Q07092 1604 aaPredicted RBP9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 H7C1W4 665 aa9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 BAG4O95429 457 aaKnown RBP9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 CYP2E1P05181 493 aaPredicted RBP9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 FOXO4P98177 505 aa9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 TNNI3KQ59H18 835 aa9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 DBNLQ9UJU6 430 aaKnown RBP9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 BRPF3Q9ULD4 1205 aa9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 FPGT-TNNI3KV9GXZ4 949 aa9.65□□□□□ -0.86
HMGXB4-201ENST00000216106 DNAJC10Q8IXB1 793 aa9.65□□□□□ -0.87
HMGXB4-201ENST00000216106 EDC3Q96F86 508 aaKnown RBP9.65□□□□□ -0.87
HMGXB4-201ENST00000216106 FSD1Q9BTV5 496 aa9.65□□□□□ -0.87
HMGXB4-201ENST00000216106 DISP2A7MBM2 1401 aa9.64□□□□□ -0.87
HMGXB4-201ENST00000216106 NMIQ13287 307 aaPredicted RBP9.64□□□□□ -0.87
HMGXB4-201ENST00000216106 CCDC191Q8NCU4 936 aa9.64□□□□□ -0.87
HMGXB4-201ENST00000216106 ATG3Q9NT62 314 aa9.64□□□□□ -0.87
HMGXB4-201ENST00000216106 CCDC9Q9Y3X0 531 aaKnown RBP9.64□□□□□ -0.87
HMGXB4-201ENST00000216106 NDUFB9Q9Y6M9 179 aa9.64□□□□□ -0.87
HMGXB4-201ENST00000216106 A0A0D9SFI3 127 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 GOLGA6L22H0YM25 854 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 CUL4AQ13619 759 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 CLEC17AQ6ZS10 378 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 ZDHHC9Q9Y397 364 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 CPA1P15085 419 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 FOXD4L5Q5VV16 416 aaPredicted RBP9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 MCTP1Q6DN14 999 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 FOXD4L4Q8WXT5 416 aaPredicted RBP9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 SYTL4Q96C24 671 aaPredicted RBP9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 DBNDD2Q9BQY9 259 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 CCDC171Q6TFL3 1326 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 AHDC1Q5TGY3 1603 aaPredicted RBP9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 PLCH1Q4KWH8 1693 aa9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 LARP6Q9BRS8 491 aaKnown RBP9.63□□□□□ -0.87
HMGXB4-201ENST00000216106 COL22A1Q8NFW1 1626 aaPredicted RBP9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 HIP1O00291 1037 aa9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 CASTP20810 708 aaKnown RBP9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 IL27Q8NEV9 243 aa9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 ZNF594Q96JF6 807 aaPredicted RBP9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 DNAJC2Q99543 621 aaKnown RBP9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 WNK3Q9BYP7 1800 aa9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 ATP5JP18859 108 aa9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 KCNJ4P48050 445 aa9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 ADCK5Q3MIX3 580 aa9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 CHAMP1Q96JM3 812 aa9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 TTC14Q96N46 770 aa9.62□□□□□ -0.87
HMGXB4-201ENST00000216106 GOLGA6L3A6NEY3 463 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 PTMSP20962 102 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 AK2P54819 239 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 ATG9AQ7Z3C6 839 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 RBM8AQ9Y5S9 174 aaKnown RBP9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 BCL9O00512 1426 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 STARD3NLO95772 234 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 KIF6Q6ZMV9 814 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 ZNF589Q86UQ0 364 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 INTS4Q96HW7 963 aaKnown RBP9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 JAKMIP1Q96N16 626 aaKnown RBP9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 ISCA1Q9BUE6 129 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 EXOC5O00471 708 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 TCIRG1Q13488 830 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 SKOR2Q2VWA4 1001 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 LRRC24Q50LG9 513 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 NEUROD6Q96NK8 337 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 SLC4A9Q96Q91 983 aa9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 TEX13AQ9BXU3 409 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-201ENST00000216106 CHGBP05060 677 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 NECTIN1Q15223 517 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 DOT1LQ8TEK3 1739 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 MED23Q9ULK4 1368 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 L1TD1Q5T7N2 865 aaKnown RBP9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 RUFY3Q7L099 469 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 FAM89AQ96GI7 184 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 DDX49Q9Y6V7 483 aaKnown RBP9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 FSD2A1L4K1 749 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 CREB3L3Q68CJ9 461 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 DDX46Q7L014 1031 aaKnown RBP9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 MAP4K1Q92918 833 aa9.6□□□□□ -0.87
HMGXB4-201ENST00000216106 A0A0G2JS52 829 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 TIMM10P62072 90 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 PUS3Q9BZE2 481 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms