RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 CHMP3Q9Y3E7 222 aa17.96■□□□□ 0.47
CBX6-201ENST00000216083 SYNE4Q8N205 404 aa17.95■□□□□ 0.46
CBX6-201ENST00000216083 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
CBX6-201ENST00000216083 CASP7P55210 303 aa17.95■□□□□ 0.46
CBX6-201ENST00000216083 TBC1D9Q6ZT07 1266 aa17.95■□□□□ 0.46
CBX6-201ENST00000216083 SDSP20132 328 aa17.95■□□□□ 0.46
CBX6-201ENST00000216083 CCDC85AQ96PX6 553 aaPredicted RBP17.94■□□□□ 0.46
CBX6-201ENST00000216083 MX1P20591 662 aa17.94■□□□□ 0.46
CBX6-201ENST00000216083 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
CBX6-201ENST00000216083 NUP188Q5SRE5 1749 aa17.94■□□□□ 0.46
CBX6-201ENST00000216083 TCIRG1Q13488 830 aa17.93■□□□□ 0.46
CBX6-201ENST00000216083 INTS5Q6P9B9 1019 aaKnown RBP17.93■□□□□ 0.46
CBX6-201ENST00000216083 LMBR1LQ6UX01 489 aa17.93■□□□□ 0.46
CBX6-201ENST00000216083 SALL3Q9BXA9 1300 aa17.93■□□□□ 0.46
CBX6-201ENST00000216083 MAP4K4O95819 1239 aaPredicted RBP17.93■□□□□ 0.46
CBX6-201ENST00000216083 FAM89AQ96GI7 184 aa17.93■□□□□ 0.46
CBX6-201ENST00000216083 TJP1Q07157 1748 aa17.93■□□□□ 0.46
CBX6-201ENST00000216083 KIF1BPQ96EK5 621 aa17.93■□□□□ 0.46
CBX6-201ENST00000216083 H7C1W4 665 aa17.92■□□□□ 0.46
CBX6-201ENST00000216083 MAP3K15Q6ZN16 1313 aa17.92■□□□□ 0.46
CBX6-201ENST00000216083 RAB11FIP3O75154 756 aa17.92■□□□□ 0.46
CBX6-201ENST00000216083 DZIP3Q86Y13 1208 aaKnown RBP17.92■□□□□ 0.46
CBX6-201ENST00000216083 QTRT2Q9H974 415 aaKnown RBP17.92■□□□□ 0.46
CBX6-201ENST00000216083 HDAC5Q9UQL6 1122 aa17.92■□□□□ 0.46
CBX6-201ENST00000216083 SASH1O94885 1247 aa17.91■□□□□ 0.46
CBX6-201ENST00000216083 SEPT12Q8IYM1 358 aa17.91■□□□□ 0.46
CBX6-201ENST00000216083 ISCA1Q9BUE6 129 aa17.91■□□□□ 0.46
CBX6-201ENST00000216083 CCDC191Q8NCU4 936 aa17.91■□□□□ 0.46
CBX6-201ENST00000216083 UPF2Q9HAU5 1272 aaKnown RBP17.91■□□□□ 0.46
CBX6-201ENST00000216083 CCDC87Q9NVE4 849 aa17.91■□□□□ 0.46
CBX6-201ENST00000216083 FAM177BA6PVY3 158 aa17.91■□□□□ 0.46
CBX6-201ENST00000216083 FOXO4P98177 505 aa17.9■□□□□ 0.46
CBX6-201ENST00000216083 TRPC5Q9UL62 973 aaPredicted RBP17.9■□□□□ 0.46
CBX6-201ENST00000216083 MYH14Q7Z406 1995 aaKnown RBP17.9■□□□□ 0.46
CBX6-201ENST00000216083 G3BP1Q13283 466 aaKnown RBP eCLIP17.9■□□□□ 0.46
CBX6-201ENST00000216083 GIGYF2Q6Y7W6 1299 aaKnown RBP17.9■□□□□ 0.46
CBX6-201ENST00000216083 ARID3AQ99856 593 aa17.9■□□□□ 0.46
CBX6-201ENST00000216083 TRIM6-TRIM34B2RNG4 842 aa17.89■□□□□ 0.46
CBX6-201ENST00000216083 GOLGA6L3A6NEY3 463 aa17.89■□□□□ 0.45
CBX6-201ENST00000216083 CDC45O75419 566 aa17.89■□□□□ 0.45
CBX6-201ENST00000216083 IL6STP40189 918 aaPredicted RBP17.89■□□□□ 0.45
CBX6-201ENST00000216083 RILPL2Q969X0 211 aa17.89■□□□□ 0.45
CBX6-201ENST00000216083 TBC1D32Q96NH3 1257 aa17.89■□□□□ 0.45
CBX6-201ENST00000216083 RFX5P48382 616 aaPredicted RBP17.89■□□□□ 0.45
CBX6-201ENST00000216083 PTPN12Q05209 780 aaKnown RBP17.89■□□□□ 0.45
CBX6-201ENST00000216083 LINC00116Q8NCU8 138 aa17.89■□□□□ 0.45
CBX6-201ENST00000216083 ZNF594Q96JF6 807 aaPredicted RBP17.89■□□□□ 0.45
CBX6-201ENST00000216083 C22orf23Q9BZE7 217 aa17.89■□□□□ 0.45
CBX6-201ENST00000216083 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
CBX6-201ENST00000216083 EIF5P55010 431 aaKnown RBP17.88■□□□□ 0.45
CBX6-201ENST00000216083 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
CBX6-201ENST00000216083 L1TD1Q5T7N2 865 aaKnown RBP17.88■□□□□ 0.45
CBX6-201ENST00000216083 OSBPL3Q9H4L5 887 aa17.88■□□□□ 0.45
CBX6-201ENST00000216083 HSP90AB4PQ58FF6 505 aa17.88■□□□□ 0.45
CBX6-201ENST00000216083 AACSQ86V21 672 aa17.87■□□□□ 0.45
CBX6-201ENST00000216083 TLR7Q9NYK1 1049 aaKnown RBP17.87■□□□□ 0.45
CBX6-201ENST00000216083 CLASRPQ8N2M8 674 aaKnown RBP17.87■□□□□ 0.45
CBX6-201ENST00000216083 SMARCC1Q92922 1105 aaPredicted RBP17.87■□□□□ 0.45
CBX6-201ENST00000216083 EAF2Q96CJ1 260 aaPredicted RBP17.87■□□□□ 0.45
CBX6-201ENST00000216083 NLRP10Q86W26 655 aa17.87■□□□□ 0.45
CBX6-201ENST00000216083 THSD7AQ9UPZ6 1657 aa17.86■□□□□ 0.45
CBX6-201ENST00000216083 ATRNO75882 1429 aa17.86■□□□□ 0.45
CBX6-201ENST00000216083 UBN2Q6ZU65 1347 aa17.86■□□□□ 0.45
CBX6-201ENST00000216083 PI4K2BQ8TCG2 481 aa17.85■□□□□ 0.45
CBX6-201ENST00000216083 STAP2Q9UGK3 403 aa17.85■□□□□ 0.45
CBX6-201ENST00000216083 IFIT2P09913 472 aaKnown RBP17.84■□□□□ 0.45
CBX6-201ENST00000216083 TFCP2Q12800 502 aa17.84■□□□□ 0.45
CBX6-201ENST00000216083 COPRSQ9NQ92 184 aa17.84■□□□□ 0.45
CBX6-201ENST00000216083 BECN1Q14457 450 aa17.84■□□□□ 0.45
CBX6-201ENST00000216083 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
CBX6-201ENST00000216083 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
CBX6-201ENST00000216083 ERC1Q8IUD2 1116 aa17.83■□□□□ 0.44
CBX6-201ENST00000216083 PUS3Q9BZE2 481 aaKnown RBP17.83■□□□□ 0.44
CBX6-201ENST00000216083 TRIM28Q13263 835 aaKnown RBP17.83■□□□□ 0.44
CBX6-201ENST00000216083 ZBTB38Q8NAP3 1195 aaPredicted RBP17.83■□□□□ 0.44
CBX6-201ENST00000216083 NUP98P52948 1817 aa17.82■□□□□ 0.44
CBX6-201ENST00000216083 AMIGO3Q86WK7 504 aa17.82■□□□□ 0.44
CBX6-201ENST00000216083 ONECUT3O60422 494 aaPredicted RBP17.82■□□□□ 0.44
CBX6-201ENST00000216083 CAMTA2O94983 1202 aa17.82■□□□□ 0.44
CBX6-201ENST00000216083 PCCAP05165 728 aaPredicted RBP17.82■□□□□ 0.44
CBX6-201ENST00000216083 BTAF1O14981 1849 aa17.82■□□□□ 0.44
CBX6-201ENST00000216083 CCNL1Q9UK58 526 aaPredicted RBP17.81■□□□□ 0.44
CBX6-201ENST00000216083 HSP90AB3PQ58FF7 597 aa17.81■□□□□ 0.44
CBX6-201ENST00000216083 SUSD4Q5VX71 490 aa17.81■□□□□ 0.44
CBX6-201ENST00000216083 COL15A1P39059 1388 aa17.8■□□□□ 0.44
CBX6-201ENST00000216083 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
CBX6-201ENST00000216083 NDUFB9Q9Y6M9 179 aa17.8■□□□□ 0.44
CBX6-201ENST00000216083 IRS4O14654 1257 aaPredicted RBP17.8■□□□□ 0.44
CBX6-201ENST00000216083 HCLS1P14317 486 aaPredicted RBP17.8■□□□□ 0.44
CBX6-201ENST00000216083 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
CBX6-201ENST00000216083 ZNF34Q8IZ26 560 aa17.8■□□□□ 0.44
CBX6-201ENST00000216083 IL25Q9H293 177 aa17.8■□□□□ 0.44
CBX6-201ENST00000216083 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
CBX6-201ENST00000216083 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
CBX6-201ENST00000216083 ECHDC1Q9NTX5 307 aa17.79■□□□□ 0.44
CBX6-201ENST00000216083 CLCN1P35523 988 aa17.79■□□□□ 0.44
CBX6-201ENST00000216083 NIP7Q9Y221 180 aaKnown RBP eCLIP17.79■□□□□ 0.44
CBX6-201ENST00000216083 BOLA2Q9H3K6 86 aa17.79■□□□□ 0.44
CBX6-201ENST00000216083 GREM2Q9H772 168 aa17.79■□□□□ 0.44
CBX6-201ENST00000216083 GNPATO15228 680 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms