RNA–Protein interactions for RNA: ENST00000216014.8

KDELR3-201, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELR3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-201ENST00000216014 RTL5Q5HYW3 569 aaPredicted RBP25.3■■□□□ 1.64
KDELR3-201ENST00000216014 MEIS3Q99687 375 aa25.3■■□□□ 1.64
KDELR3-201ENST00000216014 USP44Q9H0E7 712 aa25.3■■□□□ 1.64
KDELR3-201ENST00000216014 NRXN2Q9P2S2 1712 aa25.29■■□□□ 1.64
KDELR3-201ENST00000216014 NEXNQ0ZGT2 675 aa25.29■■□□□ 1.64
KDELR3-201ENST00000216014 CCDC24Q8N4L8 307 aa25.29■■□□□ 1.64
KDELR3-201ENST00000216014 DDX60Q8IY21 1712 aaKnown RBP25.29■■□□□ 1.64
KDELR3-201ENST00000216014 NBPF7P0C2Y1 421 aaPredicted RBP25.29■■□□□ 1.64
KDELR3-201ENST00000216014 HSP90AB3PQ58FF7 597 aa25.29■■□□□ 1.64
KDELR3-201ENST00000216014 POLRMTO00411 1230 aaKnown RBP25.28■■□□□ 1.64
KDELR3-201ENST00000216014 ALDH1L1O75891 902 aa25.28■■□□□ 1.64
KDELR3-201ENST00000216014 NTSR2O95665 410 aa25.28■■□□□ 1.64
KDELR3-201ENST00000216014 CWC25Q9NXE8 425 aaPredicted RBP25.28■■□□□ 1.64
KDELR3-201ENST00000216014 MMP10P09238 476 aa25.27■■□□□ 1.64
KDELR3-201ENST00000216014 CASP7P55210 303 aa25.27■■□□□ 1.64
KDELR3-201ENST00000216014 NUTM1Q86Y26 1132 aa25.27■■□□□ 1.64
KDELR3-201ENST00000216014 CCDC191Q8NCU4 936 aa25.27■■□□□ 1.64
KDELR3-201ENST00000216014 EXOC6Q8TAG9 804 aa25.27■■□□□ 1.64
KDELR3-201ENST00000216014 ATF5Q9Y2D1 282 aaPredicted RBP25.27■■□□□ 1.64
KDELR3-201ENST00000216014 ZBTB7BO15156 539 aaPredicted RBP25.26■■□□□ 1.63
KDELR3-201ENST00000216014 NLGN1Q8N2Q7 840 aa25.26■■□□□ 1.63
KDELR3-201ENST00000216014 FAM89AQ96GI7 184 aa25.26■■□□□ 1.63
KDELR3-201ENST00000216014 SETDB2Q96T68 719 aa25.26■■□□□ 1.63
KDELR3-201ENST00000216014 TNRC6CQ9HCJ0 1690 aaKnown RBP25.26■■□□□ 1.63
KDELR3-201ENST00000216014 ANKRD31Q8N7Z5 1873 aa25.25■■□□□ 1.63
KDELR3-201ENST00000216014 CARMIL3Q8ND23 1372 aa25.25■■□□□ 1.63
KDELR3-201ENST00000216014 ABCC12Q96J65 1359 aa25.25■■□□□ 1.63
KDELR3-201ENST00000216014 LAMB2P55268 1798 aa25.25■■□□□ 1.63
KDELR3-201ENST00000216014 H7C1W4 665 aa25.24■■□□□ 1.63
KDELR3-201ENST00000216014 UBE3BQ7Z3V4 1068 aa25.24■■□□□ 1.63
KDELR3-201ENST00000216014 KAZALD1Q96I82 304 aa25.24■■□□□ 1.63
KDELR3-201ENST00000216014 GRM8O00222 908 aa25.23■■□□□ 1.63
KDELR3-201ENST00000216014 MS4A1P11836 297 aa25.23■■□□□ 1.63
KDELR3-201ENST00000216014 SRCAPQ6ZRS2 3230 aa25.23■■□□□ 1.63
KDELR3-201ENST00000216014 UTYO14607 1347 aa25.23■■□□□ 1.63
KDELR3-201ENST00000216014 ERFEQ4G0M1 354 aa25.23■■□□□ 1.63
KDELR3-201ENST00000216014 PARP10Q53GL7 1025 aa25.23■■□□□ 1.63
KDELR3-201ENST00000216014 SLC16A10Q8TF71 515 aa25.23■■□□□ 1.63
KDELR3-201ENST00000216014 C1orf115Q9H7X2 142 aa25.23■■□□□ 1.63
KDELR3-201ENST00000216014 TRMT112Q9UI30 125 aaKnown RBP25.23■■□□□ 1.63
KDELR3-201ENST00000216014 SERPINB2P05120 415 aa25.22■■□□□ 1.63
KDELR3-201ENST00000216014 EPHA10Q5JZY3 1008 aa25.22■■□□□ 1.63
KDELR3-201ENST00000216014 UTP14AQ9BVJ6 771 aaKnown RBP25.22■■□□□ 1.63
KDELR3-201ENST00000216014 IBTKQ9P2D0 1353 aaPredicted RBP25.22■■□□□ 1.63
KDELR3-201ENST00000216014 PRR5LQ6MZQ0 368 aa25.21■■□□□ 1.63
KDELR3-201ENST00000216014 C3orf67Q6ZVT6 689 aa25.21■■□□□ 1.63
KDELR3-201ENST00000216014 SGIP1Q9BQI5 828 aa25.21■■□□□ 1.63
KDELR3-201ENST00000216014 MTFR1LQ9H019 292 aa25.21■■□□□ 1.63
KDELR3-201ENST00000216014 PCCAP05165 728 aaPredicted RBP25.2■■□□□ 1.63
KDELR3-201ENST00000216014 NBPF5PQ86XG9 351 aaPredicted RBP25.2■■□□□ 1.63
KDELR3-201ENST00000216014 ZBTB38Q8NAP3 1195 aaPredicted RBP25.2■■□□□ 1.63
KDELR3-201ENST00000216014 SUCLG2Q96I99 432 aa25.2■■□□□ 1.63
KDELR3-201ENST00000216014 MYH3P11055 1940 aa25.2■■□□□ 1.62
KDELR3-201ENST00000216014 HCLS1P14317 486 aaPredicted RBP25.2■■□□□ 1.62
KDELR3-201ENST00000216014 PTGER2P43116 358 aa25.2■■□□□ 1.62
KDELR3-201ENST00000216014 ZBTB40Q9NUA8 1239 aa25.2■■□□□ 1.62
KDELR3-201ENST00000216014 C9orf78Q9NZ63 289 aaPredicted RBP25.2■■□□□ 1.62
KDELR3-201ENST00000216014 COL4A1P02462 1669 aa25.19■■□□□ 1.62
KDELR3-201ENST00000216014 PPP1R42Q7Z4L9 355 aa25.18■■□□□ 1.62
KDELR3-201ENST00000216014 DDX19BQ9UMR2 479 aa25.18■■□□□ 1.62
KDELR3-201ENST00000216014 TAF1P21675 1872 aa25.18■■□□□ 1.62
KDELR3-201ENST00000216014 LRRFIP2Q9Y608 721 aaKnown RBP25.17■■□□□ 1.62
KDELR3-201ENST00000216014 SH3TC1Q8TE82 1336 aa25.17■■□□□ 1.62
KDELR3-201ENST00000216014 FOXO4P98177 505 aa25.16■■□□□ 1.62
KDELR3-201ENST00000216014 CNBD1Q8NA66 436 aa25.16■■□□□ 1.62
KDELR3-201ENST00000216014 PARP3Q9Y6F1 533 aa25.16■■□□□ 1.62
KDELR3-201ENST00000216014 COL11A2P13942 1736 aaPredicted RBP25.16■■□□□ 1.62
KDELR3-201ENST00000216014 IRS4O14654 1257 aaPredicted RBP25.15■■□□□ 1.62
KDELR3-201ENST00000216014 UBTFL1P0CB47 393 aaPredicted RBP25.15■■□□□ 1.62
KDELR3-201ENST00000216014 ANKRD44Q8N8A2 993 aa25.15■■□□□ 1.62
KDELR3-201ENST00000216014 CDHR2Q9BYE9 1310 aa25.14■■□□□ 1.62
KDELR3-201ENST00000216014 TPTE2Q6XPS3 522 aa25.14■■□□□ 1.61
KDELR3-201ENST00000216014 BICC1Q9H694 974 aaKnown RBP25.14■■□□□ 1.61
KDELR3-201ENST00000216014 KIF13BQ9NQT8 1826 aa25.13■■□□□ 1.61
KDELR3-201ENST00000216014 NYXQ9GZU5 481 aa25.13■■□□□ 1.61
KDELR3-201ENST00000216014 KIAA1551Q9HCM1 1747 aa25.13■■□□□ 1.61
KDELR3-201ENST00000216014 SLC10A5Q5PT55 438 aa25.12■■□□□ 1.61
KDELR3-201ENST00000216014 PCDHB15Q9Y5E8 787 aa25.12■■□□□ 1.61
KDELR3-201ENST00000216014 GNAI3P08754 354 aa25.12■■□□□ 1.61
KDELR3-201ENST00000216014 CCDC85AQ96PX6 553 aaPredicted RBP25.12■■□□□ 1.61
KDELR3-201ENST00000216014 C10orf71Q711Q0 1435 aa25.1■■□□□ 1.61
KDELR3-201ENST00000216014 GTF2E1P29083 439 aaPredicted RBP25.1■■□□□ 1.61
KDELR3-201ENST00000216014 SIRT2Q8IXJ6 389 aa25.1■■□□□ 1.61
KDELR3-201ENST00000216014 GNAI2P04899 355 aa25.09■■□□□ 1.61
KDELR3-201ENST00000216014 PLA2G12BQ9BX93 195 aa25.09■■□□□ 1.61
KDELR3-201ENST00000216014 GOLGB1Q14789 3259 aaKnown RBP25.08■■□□□ 1.61
KDELR3-201ENST00000216014 LMBR1LQ6UX01 489 aa25.08■■□□□ 1.61
KDELR3-201ENST00000216014 RIC1Q4ADV7 1423 aa25.08■■□□□ 1.61
KDELR3-201ENST00000216014 SPEF2Q9C093 1822 aa25.08■■□□□ 1.6
KDELR3-201ENST00000216014 PNMA6EA0A0J9YXQ4 647 aa25.07■■□□□ 1.6
KDELR3-201ENST00000216014 NPHP1O15259 732 aa25.07■■□□□ 1.6
KDELR3-201ENST00000216014 PDE8AO60658 829 aa25.07■■□□□ 1.6
KDELR3-201ENST00000216014 CTSWP56202 376 aa25.07■■□□□ 1.6
KDELR3-201ENST00000216014 RABL6Q3YEC7 729 aaPredicted RBP25.07■■□□□ 1.6
KDELR3-201ENST00000216014 CEP85Q6P2H3 762 aa25.07■■□□□ 1.6
KDELR3-201ENST00000216014 SLC51AQ86UW1 340 aa25.07■■□□□ 1.6
KDELR3-201ENST00000216014 TTLL11Q8NHH1 800 aa25.07■■□□□ 1.6
KDELR3-201ENST00000216014 SPON1Q9HCB6 807 aa25.06■■□□□ 1.6
KDELR3-201ENST00000216014 CSF1RP07333 972 aa25.06■■□□□ 1.6
KDELR3-201ENST00000216014 ST5P78524 1137 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms