RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 RFX5P48382 616 aaPredicted RBP19.21■□□□□ 0.67
LAPTM4A-201ENST00000175091 ITPK1Q13572 414 aa19.21■□□□□ 0.67
LAPTM4A-201ENST00000175091 CCDC87Q9NVE4 849 aa19.21■□□□□ 0.67
LAPTM4A-201ENST00000175091 TSHZ3Q63HK5 1081 aa19.21■□□□□ 0.67
LAPTM4A-201ENST00000175091 INTS5Q6P9B9 1019 aaKnown RBP19.21■□□□□ 0.67
LAPTM4A-201ENST00000175091 COPRSQ9NQ92 184 aa19.21■□□□□ 0.67
LAPTM4A-201ENST00000175091 TRPC5Q9UL62 973 aaPredicted RBP19.21■□□□□ 0.67
LAPTM4A-201ENST00000175091 USP42Q9H9J4 1324 aaKnown RBP19.2■□□□□ 0.66
LAPTM4A-201ENST00000175091 ONECUT3O60422 494 aaPredicted RBP19.2■□□□□ 0.66
LAPTM4A-201ENST00000175091 CRKLP46109 303 aaKnown RBP19.2■□□□□ 0.66
LAPTM4A-201ENST00000175091 EIF5P55010 431 aaKnown RBP19.2■□□□□ 0.66
LAPTM4A-201ENST00000175091 FOXO4P98177 505 aa19.2■□□□□ 0.66
LAPTM4A-201ENST00000175091 HSP90AB3PQ58FF7 597 aa19.19■□□□□ 0.66
LAPTM4A-201ENST00000175091 ERVV-1B6SEH8 477 aa19.19■□□□□ 0.66
LAPTM4A-201ENST00000175091 SASH1O94885 1247 aa19.19■□□□□ 0.66
LAPTM4A-201ENST00000175091 HLFQ16534 295 aa19.19■□□□□ 0.66
LAPTM4A-201ENST00000175091 NUTM1Q86Y26 1132 aa19.19■□□□□ 0.66
LAPTM4A-201ENST00000175091 TAF1LQ8IZX4 1826 aa19.19■□□□□ 0.66
LAPTM4A-201ENST00000175091 SCN7AQ01118 1682 aa19.18■□□□□ 0.66
LAPTM4A-201ENST00000175091 PTPN12Q05209 780 aaKnown RBP19.18■□□□□ 0.66
LAPTM4A-201ENST00000175091 DZIP3Q86Y13 1208 aaKnown RBP19.18■□□□□ 0.66
LAPTM4A-201ENST00000175091 CLASRPQ8N2M8 674 aaKnown RBP19.18■□□□□ 0.66
LAPTM4A-201ENST00000175091 KLHDC4Q8TBB5 520 aa19.18■□□□□ 0.66
LAPTM4A-201ENST00000175091 C22orf23Q9BZE7 217 aa19.18■□□□□ 0.66
LAPTM4A-201ENST00000175091 PCCAP05165 728 aaPredicted RBP19.17■□□□□ 0.66
LAPTM4A-201ENST00000175091 G3BP1Q13283 466 aaKnown RBP eCLIP19.17■□□□□ 0.665e-8■□□□□ 8.5
LAPTM4A-201ENST00000175091 LMBR1LQ6UX01 489 aa19.17■□□□□ 0.66
LAPTM4A-201ENST00000175091 PI4K2BQ8TCG2 481 aa19.17■□□□□ 0.66
LAPTM4A-201ENST00000175091 LAMB2P55268 1798 aa19.17■□□□□ 0.66
LAPTM4A-201ENST00000175091 BRWD3Q6RI45 1802 aa19.17■□□□□ 0.66
LAPTM4A-201ENST00000175091 SIL1Q9H173 461 aa19.16■□□□□ 0.66
LAPTM4A-201ENST00000175091 TTC41PQ6P2S7 1318 aa19.16■□□□□ 0.66
LAPTM4A-201ENST00000175091 EIF5BO60841 1220 aaKnown RBP19.16■□□□□ 0.66
LAPTM4A-201ENST00000175091 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
LAPTM4A-201ENST00000175091 NLRP10Q86W26 655 aa19.16■□□□□ 0.66
LAPTM4A-201ENST00000175091 CDHR2Q9BYE9 1310 aa19.15■□□□□ 0.66
LAPTM4A-201ENST00000175091 RBM25P49756 843 aaKnown RBP19.15■□□□□ 0.66
LAPTM4A-201ENST00000175091 PTF1AQ7RTS3 328 aa19.15■□□□□ 0.66
LAPTM4A-201ENST00000175091 ZBTB38Q8NAP3 1195 aaPredicted RBP19.15■□□□□ 0.66
LAPTM4A-201ENST00000175091 ARXQ96QS3 562 aa19.15■□□□□ 0.66
LAPTM4A-201ENST00000175091 PLA2G12BQ9BX93 195 aa19.15■□□□□ 0.66
LAPTM4A-201ENST00000175091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.15■□□□□ 0.66
LAPTM4A-201ENST00000175091 TBC1D2BQ9UPU7 963 aa19.14■□□□□ 0.66
LAPTM4A-201ENST00000175091 CASC1Q6TDU7 716 aa19.14■□□□□ 0.65
LAPTM4A-201ENST00000175091 LINC00116Q8NCU8 138 aa19.14■□□□□ 0.65
LAPTM4A-201ENST00000175091 EP400Q96L91 3159 aa19.13■□□□□ 0.65
LAPTM4A-201ENST00000175091 UBN2Q6ZU65 1347 aa19.13■□□□□ 0.65
LAPTM4A-201ENST00000175091 CNTNAP4Q9C0A0 1308 aa19.13■□□□□ 0.65
LAPTM4A-201ENST00000175091 GPTP24298 496 aa19.13■□□□□ 0.65
LAPTM4A-201ENST00000175091 SEPT12Q8IYM1 358 aa19.13■□□□□ 0.65
LAPTM4A-201ENST00000175091 DDX60Q8IY21 1712 aaKnown RBP19.12■□□□□ 0.65
LAPTM4A-201ENST00000175091 FAM182BQ5T319 152 aa19.12■□□□□ 0.65
LAPTM4A-201ENST00000175091 AACSQ86V21 672 aa19.12■□□□□ 0.65
LAPTM4A-201ENST00000175091 ZNF34Q8IZ26 560 aa19.12■□□□□ 0.65
LAPTM4A-201ENST00000175091 EAF2Q96CJ1 260 aaPredicted RBP19.12■□□□□ 0.65
LAPTM4A-201ENST00000175091 CAMTA2O94983 1202 aa19.11■□□□□ 0.65
LAPTM4A-201ENST00000175091 IFIT2P09913 472 aaKnown RBP19.11■□□□□ 0.65
LAPTM4A-201ENST00000175091 FAM89AQ96GI7 184 aa19.11■□□□□ 0.65
LAPTM4A-201ENST00000175091 CHMP3Q9Y3E7 222 aa19.11■□□□□ 0.65
LAPTM4A-201ENST00000175091 LRP5O75197 1615 aa19.11■□□□□ 0.65
LAPTM4A-201ENST00000175091 GLRX3O76003 335 aaKnown RBP19.11■□□□□ 0.65
LAPTM4A-201ENST00000175091 GPATCH3Q96I76 525 aa19.11■□□□□ 0.65
LAPTM4A-201ENST00000175091 ECHDC1Q9NTX5 307 aa19.11■□□□□ 0.65
LAPTM4A-201ENST00000175091 TRIM6-TRIM34B2RNG4 842 aa19.1■□□□□ 0.65
LAPTM4A-201ENST00000175091 ERC2O15083 957 aa19.1■□□□□ 0.65
LAPTM4A-201ENST00000175091 QTRT2Q9H974 415 aaKnown RBP19.1■□□□□ 0.65
LAPTM4A-201ENST00000175091 C4AP0C0L4 1744 aa19.09■□□□□ 0.65
LAPTM4A-201ENST00000175091 C4BP0C0L5 1744 aa19.09■□□□□ 0.65
LAPTM4A-201ENST00000175091 CASZ1Q86V15 1759 aa19.09■□□□□ 0.65
LAPTM4A-201ENST00000175091 CSF1RP07333 972 aa19.09■□□□□ 0.65
LAPTM4A-201ENST00000175091 RILPL2Q969X0 211 aa19.09■□□□□ 0.65
LAPTM4A-201ENST00000175091 TLR7Q9NYK1 1049 aaKnown RBP19.09■□□□□ 0.65
LAPTM4A-201ENST00000175091 ATG9AQ7Z3C6 839 aa19.08■□□□□ 0.64
LAPTM4A-201ENST00000175091 COL24A1Q17RW2 1714 aa19.08■□□□□ 0.64
LAPTM4A-201ENST00000175091 ZNF609O15014 1411 aa19.08■□□□□ 0.64
LAPTM4A-201ENST00000175091 CIAO1O76071 339 aa19.07■□□□□ 0.64
LAPTM4A-201ENST00000175091 CHMLP26374 656 aa19.07■□□□□ 0.64
LAPTM4A-201ENST00000175091 TFCP2Q12800 502 aa19.07■□□□□ 0.64
LAPTM4A-201ENST00000175091 TNNI3KQ59H18 835 aa19.07■□□□□ 0.64
LAPTM4A-201ENST00000175091 ERICH6Q7L0X2 663 aa19.07■□□□□ 0.64
LAPTM4A-201ENST00000175091 CNTROBQ8N137 903 aa19.07■□□□□ 0.64
LAPTM4A-201ENST00000175091 TRMT112Q9UI30 125 aaKnown RBP19.07■□□□□ 0.64
LAPTM4A-201ENST00000175091 FPGT-TNNI3KV9GXZ4 949 aa19.07■□□□□ 0.64
LAPTM4A-201ENST00000175091 SYNE4Q8N205 404 aa19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 CCDC8Q9H0W5 538 aaPredicted RBP19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 EYA2O00167 538 aa19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 REC8O95072 547 aa19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 IL15P40933 162 aaPredicted RBP19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 CTSWP56202 376 aa19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 KCNQ4P56696 695 aa19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 RC3H1Q5TC82 1133 aaKnown RBP19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 ESYT1Q9BSJ8 1104 aa19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
LAPTM4A-201ENST00000175091 IRS4O14654 1257 aaPredicted RBP19.05■□□□□ 0.64
LAPTM4A-201ENST00000175091 RGL2O15211 777 aa19.05■□□□□ 0.64
LAPTM4A-201ENST00000175091 CCDC57Q2TAC2 916 aa19.05■□□□□ 0.64
LAPTM4A-201ENST00000175091 PARP10Q53GL7 1025 aa19.05■□□□□ 0.64
LAPTM4A-201ENST00000175091 KIF2CQ99661 725 aa19.05■□□□□ 0.64
LAPTM4A-201ENST00000175091 USP26Q9BXU7 913 aa19.05■□□□□ 0.64
LAPTM4A-201ENST00000175091 DBNLQ9UJU6 430 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms