RNA–Protein interactions for RNA: ENST00000034275.12

RANBP3-201, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-201ENST00000034275 CEP85Q6P2H3 762 aa21.07■□□□□ 0.96
RANBP3-201ENST00000034275 ANKRD44Q8N8A2 993 aa21.07■□□□□ 0.96
RANBP3-201ENST00000034275 SRP68Q9UHB9 627 aaKnown RBP21.07■□□□□ 0.96
RANBP3-201ENST00000034275 NIP7Q9Y221 180 aaKnown RBP eCLIP21.07■□□□□ 0.96
RANBP3-201ENST00000034275 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
RANBP3-201ENST00000034275 ZNF827Q17R98 1081 aa21.06■□□□□ 0.96
RANBP3-201ENST00000034275 ZBTB38Q8NAP3 1195 aaPredicted RBP21.06■□□□□ 0.96
RANBP3-201ENST00000034275 UBR3Q6ZT12 1888 aa21.06■□□□□ 0.96
RANBP3-201ENST00000034275 CENPQQ7L2Z9 268 aaPredicted RBP21.05■□□□□ 0.96
RANBP3-201ENST00000034275 HMMRO75330 724 aa21.05■□□□□ 0.96
RANBP3-201ENST00000034275 ATP8B2P98198 1209 aa21.05■□□□□ 0.96
RANBP3-201ENST00000034275 SIRT2Q8IXJ6 389 aa21.05■□□□□ 0.96
RANBP3-201ENST00000034275 JARID2Q92833 1246 aaPredicted RBP21.05■□□□□ 0.96
RANBP3-201ENST00000034275 BCL2L12Q9HB09 334 aa21.05■□□□□ 0.96
RANBP3-201ENST00000034275 TRMT112Q9UI30 125 aaKnown RBP21.05■□□□□ 0.96
RANBP3-201ENST00000034275 PCCAP05165 728 aaPredicted RBP21.04■□□□□ 0.96
RANBP3-201ENST00000034275 RTL5Q5HYW3 569 aaPredicted RBP21.04■□□□□ 0.96
RANBP3-201ENST00000034275 PPP1R42Q7Z4L9 355 aa21.04■□□□□ 0.96
RANBP3-201ENST00000034275 ANKRD36CQ5JPF3 1778 aa21.04■□□□□ 0.96
RANBP3-201ENST00000034275 UBN2Q6ZU65 1347 aa21.03■□□□□ 0.96
RANBP3-201ENST00000034275 SUCLG2Q96I99 432 aa21.03■□□□□ 0.96
RANBP3-201ENST00000034275 SETDB2Q96T68 719 aa21.03■□□□□ 0.96
RANBP3-201ENST00000034275 STK32BQ9NY57 414 aa21.03■□□□□ 0.96
RANBP3-201ENST00000034275 CASP7P55210 303 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 SLC15A2Q16348 729 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 SUSD4Q5VX71 490 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 FAM89AQ96GI7 184 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 UTP14AQ9BVJ6 771 aaKnown RBP21.02■□□□□ 0.96
RANBP3-201ENST00000034275 BCORQ6W2J9 1755 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 KDM2BQ8NHM5 1336 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 MSH5O43196 834 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 TBC1D9BQ66K14 1250 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 BICDL1Q6ZP65 573 aa21.02■□□□□ 0.96
RANBP3-201ENST00000034275 KAZALD1Q96I82 304 aa21.01■□□□□ 0.95
RANBP3-201ENST00000034275 BICC1Q9H694 974 aaKnown RBP21.01■□□□□ 0.95
RANBP3-201ENST00000034275 COL23A1Q86Y22 540 aaPredicted RBP21■□□□□ 0.95
RANBP3-201ENST00000034275 C4AP0C0L4 1744 aa21■□□□□ 0.95
RANBP3-201ENST00000034275 FAM177BA6PVY3 158 aa21■□□□□ 0.95
RANBP3-201ENST00000034275 SRGAP3O43295 1099 aa21■□□□□ 0.95
RANBP3-201ENST00000034275 GYS1P13807 737 aa21■□□□□ 0.95
RANBP3-201ENST00000034275 MTX1Q13505 466 aa21■□□□□ 0.95
RANBP3-201ENST00000034275 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
RANBP3-201ENST00000034275 PNMA6EA0A0J9YXQ4 647 aa20.99■□□□□ 0.95
RANBP3-201ENST00000034275 HSP90B1P14625 803 aaKnown RBP20.99■□□□□ 0.95
RANBP3-201ENST00000034275 UPF1Q92900 1129 aaKnown RBP eCLIP20.99■□□□□ 0.95
RANBP3-201ENST00000034275 SH3TC1Q8TE82 1336 aa20.98■□□□□ 0.95
RANBP3-201ENST00000034275 CDHR2Q9BYE9 1310 aa20.98■□□□□ 0.95
RANBP3-201ENST00000034275 SSH3Q8TE77 659 aa20.98■□□□□ 0.95
RANBP3-201ENST00000034275 GCC1Q96CN9 775 aa20.98■□□□□ 0.95
RANBP3-201ENST00000034275 IRS4O14654 1257 aaPredicted RBP20.97■□□□□ 0.95
RANBP3-201ENST00000034275 GTF2E1P29083 439 aaPredicted RBP20.97■□□□□ 0.95
RANBP3-201ENST00000034275 EPHA10Q5JZY3 1008 aa20.97■□□□□ 0.95
RANBP3-201ENST00000034275 NYXQ9GZU5 481 aa20.97■□□□□ 0.95
RANBP3-201ENST00000034275 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
RANBP3-201ENST00000034275 PNPLA7Q6ZV29 1317 aa20.97■□□□□ 0.95
RANBP3-201ENST00000034275 FOXO4P98177 505 aa20.97■□□□□ 0.95
RANBP3-201ENST00000034275 RABL6Q3YEC7 729 aaPredicted RBP20.97■□□□□ 0.95
RANBP3-201ENST00000034275 TPTE2Q6XPS3 522 aa20.97■□□□□ 0.95
RANBP3-201ENST00000034275 SYNE4Q8N205 404 aa20.97■□□□□ 0.95
RANBP3-201ENST00000034275 NLGN1Q8N2Q7 840 aa20.97■□□□□ 0.95
RANBP3-201ENST00000034275 DCTPP1Q9H773 170 aa20.97■□□□□ 0.95
RANBP3-201ENST00000034275 NTSR2O95665 410 aa20.96■□□□□ 0.95
RANBP3-201ENST00000034275 NBPF5PQ86XG9 351 aaPredicted RBP20.96■□□□□ 0.95
RANBP3-201ENST00000034275 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
RANBP3-201ENST00000034275 PLA2G12BQ9BX93 195 aa20.96■□□□□ 0.95
RANBP3-201ENST00000034275 POLA2Q14181 598 aa20.95■□□□□ 0.94
RANBP3-201ENST00000034275 NFIXQ14938 502 aa20.95■□□□□ 0.94
RANBP3-201ENST00000034275 LMBR1LQ6UX01 489 aa20.95■□□□□ 0.94
RANBP3-201ENST00000034275 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
RANBP3-201ENST00000034275 PDE8AO60658 829 aa20.95■□□□□ 0.94
RANBP3-201ENST00000034275 NUTM1Q86Y26 1132 aa20.94■□□□□ 0.94
RANBP3-201ENST00000034275 CARMIL3Q8ND23 1372 aa20.93■□□□□ 0.94
RANBP3-201ENST00000034275 NPHP1O15259 732 aa20.93■□□□□ 0.94
RANBP3-201ENST00000034275 TM4SF1P30408 202 aa20.93■□□□□ 0.94
RANBP3-201ENST00000034275 CHMP3Q9Y3E7 222 aa20.93■□□□□ 0.94
RANBP3-201ENST00000034275 SURF6O75683 361 aaKnown RBP20.92■□□□□ 0.94
RANBP3-201ENST00000034275 HCLS1P14317 486 aaPredicted RBP20.92■□□□□ 0.94
RANBP3-201ENST00000034275 TUBGCP6Q96RT7 1819 aa20.92■□□□□ 0.94
RANBP3-201ENST00000034275 CSF1RP07333 972 aa20.91■□□□□ 0.94
RANBP3-201ENST00000034275 ERFEQ4G0M1 354 aa20.91■□□□□ 0.94
RANBP3-201ENST00000034275 ZBTB47Q9UFB7 747 aaPredicted RBP20.91■□□□□ 0.94
RANBP3-201ENST00000034275 CTSWP56202 376 aa20.9■□□□□ 0.94
RANBP3-201ENST00000034275 HSP90AB4PQ58FF6 505 aa20.9■□□□□ 0.94
RANBP3-201ENST00000034275 SLC10A5Q5PT55 438 aa20.9■□□□□ 0.94
RANBP3-201ENST00000034275 ANKRD45Q5TZF3 282 aa20.9■□□□□ 0.94
RANBP3-201ENST00000034275 TTLL11Q8NHH1 800 aa20.9■□□□□ 0.94
RANBP3-201ENST00000034275 CCDC57Q2TAC2 916 aa20.9■□□□□ 0.94
RANBP3-201ENST00000034275 EXOC6BQ9Y2D4 811 aa20.9■□□□□ 0.94
RANBP3-201ENST00000034275 SERPINB2P05120 415 aa20.89■□□□□ 0.93
RANBP3-201ENST00000034275 NUCB1Q02818 461 aa20.88■□□□□ 0.93
RANBP3-201ENST00000034275 CNBD1Q8NA66 436 aa20.88■□□□□ 0.93
RANBP3-201ENST00000034275 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
RANBP3-201ENST00000034275 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
RANBP3-201ENST00000034275 RAB11FIP3O75154 756 aa20.87■□□□□ 0.93
RANBP3-201ENST00000034275 IFIT5Q13325 482 aaKnown RBP20.87■□□□□ 0.93
RANBP3-201ENST00000034275 CCDC85AQ96PX6 553 aaPredicted RBP20.87■□□□□ 0.93
RANBP3-201ENST00000034275 COPRSQ9NQ92 184 aa20.87■□□□□ 0.93
RANBP3-201ENST00000034275 QSER1Q2KHR3 1735 aa20.87■□□□□ 0.93
RANBP3-201ENST00000034275 APBB1O00213 710 aa20.87■□□□□ 0.93
RANBP3-201ENST00000034275 G3BP1Q13283 466 aaKnown RBP eCLIP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms