RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Tlr8P58682 1032 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Fam198bQ3UPI1 517 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Kif18aQ91WD7 886 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Eif3aP23116 1344 aaKnown RBP11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 TicrrQ8BQ33 1889 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 NynrinQ5DTZ0 1840 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Klc3Q91W40 508 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Taf5lQ91WQ5 589 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Zbtb3Q91X45 518 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Tktl2Q9D4D4 627 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Smg7Q5RJH6 1138 aaKnown RBP11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Unc5clQ6R653 518 aa11.81□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Usp34Q6ZQ93 3582 aa11.8□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Tbc1d4Q8BYJ6 1307 aa11.8□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Dis3l2Q8CI75 870 aaKnown RBP11.8□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Edc3Q8K2D3 508 aaKnown RBP11.8□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Tmc2Q8R4P4 888 aa11.8□□□□□ -0.52
Prpf39-201ENSMUST00000120580 GapdhsQ64467 440 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Dhx38Q80X98 1228 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 4930504O13RikQ8C5Z9 145 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Tpx2A2APB8 745 aaKnown RBP11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Slc4a1P04919 929 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Srp68Q8BMA6 625 aaKnown RBP11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Cwc27Q3TKY6 469 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 EngaseQ8BX80 734 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Cluap1Q8R3P7 413 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Ciao1Q99KN2 339 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Cwc25Q9DBF7 416 aa11.79□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Tbc1d32Q3URV1 1296 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Soga3Q6NZL0 945 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 DiexfQ8BTT6 772 aaKnown RBP11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 CenppQ9CZ92 286 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 EspnQ9ET47 871 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Esco1Q69Z69 843 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Shisa4Q8CA71 197 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Fam213aQ9CYH2 218 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Ltbp2O08999 1813 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Prl3d2F6R3P9 224 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Prune1Q8BIW1 454 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Ppp6r3Q922D4 844 aa11.78□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Rangap1P46061 589 aaKnown RBP11.77□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Atp1b3P97370 278 aa11.77□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Slc38a10Q5I012 1090 aa11.77□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Fkbp5Q64378 456 aa11.77□□□□□ -0.52
Prpf39-201ENSMUST00000120580 Jarid2Q62315 1234 aa11.77□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Slc39a11Q8BWY7 342 aa11.77□□□□□ -0.53
Prpf39-201ENSMUST00000120580 DbnlQ62418 436 aa11.77□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Ggt6Q6PDE7 497 aa11.77□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Plxnb2B2RXS4 1842 aa11.77□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Nphp1Q9QY53 687 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Gnat3Q3V3I2 354 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Sumf1Q8R0F3 372 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Sf3b3Q921M3 1217 aaKnown RBP11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Gcc1Q9D4H2 778 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Chmp5Q9D7S9 219 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 VgfQ0VGU4 617 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Cfdp1O88271 295 aaKnown RBP11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Myd88P22366 296 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 ErfeQ6PGN1 340 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 RestQ8VIG1 1082 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Sh3bp5lQ99LH9 392 aa11.76□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Myh6Q02566 1938 aaKnown RBP11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Cacna1fQ9JIS7 1985 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Cyp2d10P24456 504 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Nlrp1aQ2LKU9 1182 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Cog6Q8R3I3 657 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Sult6b1P0CC03 303 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Cetn4Q8K4K1 168 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Bcar3Q9QZK2 820 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Prr29B1ARI9 187 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Apba2P98084 750 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Insm1Q63ZV0 521 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 B4galnt3Q6L8S8 986 aa11.75□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Armcx1Q9CX83 456 aa11.74□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Zbtb38Q3LR78 1197 aa11.74□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Ncoa5Q91W39 579 aaKnown RBP11.74□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Prl3d3A0A0M6L0J6 224 aa11.74□□□□□ -0.53
Prpf39-201ENSMUST00000120580 1810065E05RikQ5NC41 235 aa11.74□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Chmp4bQ9D8B3 224 aaKnown RBP11.74□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Gpr182P43142 395 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Tbc1d9Q3UYK3 1264 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 NfkbibQ60778 359 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Smarcc1P97496 1104 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Amhr2Q8K592 568 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Fam84aQ9D650 292 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Irx6Q9ER75 438 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Brpf1B2RRD7 1212 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 CalcaP70160 136 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 LratQ9JI60 231 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Kcnq5Q9JK45 933 aa11.73□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Pdia3P27773 505 aaKnown RBP11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Slc51aQ8R000 340 aa11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 HmcesQ8R1M0 353 aaKnown RBP11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Ccne2Q9Z238 404 aa11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Ccdc183A2AJB1 534 aa11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Kcnb2A6H8H5 907 aa11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Ms4a2P20490 235 aa11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 GpkowQ56A08 488 aa11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Cops6O88545 324 aa11.72□□□□□ -0.53
Prpf39-201ENSMUST00000120580 Dbr1Q923B1 550 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 117.6 ms