RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Msl1Q6PDM1 616 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Cfap58B2RW38 873 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Mkrn3Q60764 544 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Rai14Q9EP71 979 aaKnown RBP10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Syt10Q9R0N4 523 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Trim34bJ3QNR8 485 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Kiaa1211Q5PR69 1207 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ctr9Q62018 1173 aaKnown RBP10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Pnpla2Q8BJ56 486 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Slc39a6Q8C145 765 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ccer1Q9CQL2 403 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Cwc27Q3TKY6 469 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Igsf3Q6ZQA6 1194 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ccar2Q8VDP4 922 aaKnown RBP10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Noc3lQ8VI84 807 aaKnown RBP10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ccdc83Q9D4V3 305 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Bcar3Q9QZK2 820 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Gm42641I6L9G2 585 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ms4a1P19437 291 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Tyro3P55144 880 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Oxsr1Q6P9R2 527 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 AtripQ8BMG1 785 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Snw1Q9CSN1 536 aaKnown RBP10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Golga5Q9QYE6 729 aa10.32□□□□□ -0.76
Col28a1-201ENSMUST00000115537 CalrP14211 416 aaKnown RBP10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Soga3Q6NZL0 945 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 EngaseQ8BX80 734 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Inpp5bQ8K337 993 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ranbp1P34022 203 aaKnown RBP10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Igflr1Q3U4N7 345 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Rbm26Q6NZN0 1012 aaKnown RBP10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Fam177a1Q8BR63 207 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Neurl4Q5NCX5 1563 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Pola1P33609 1465 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Arhgap4B1AUY3 965 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Morc2aQ69ZX6 1030 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ptpdc1Q6NZK8 747 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Tmco3Q8BH01 678 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Vps18Q8R307 973 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Hnrnpul1Q8VDM6 859 aaKnown RBP10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Znhit6Q3UFB2 460 aaKnown RBP10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ccdc66Q6NS45 935 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Phkg2Q9DB30 406 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Igbp1bQ9QZ29 343 aa10.31□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Lamc1P02468 1607 aaKnown RBP10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Gnai2P08752 355 aaKnown RBP10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Gjb2Q00977 226 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Rab3gap1Q80UJ7 981 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Q9D9S1 216 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Chaf1aQ9QWF0 911 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 DonsonQ9QXP4 560 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Krt85Q9Z2T6 507 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 CalcaP70160 136 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Wdr93Q402B2 695 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 GckrQ91X44 587 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Stk3Q9JI10 497 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Tmem2Q5FWI3 1383 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ica1lQ3TY65 431 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Fam83gQ5SWY7 812 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 CtifQ6PEE2 600 aaKnown RBP10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Fam13aQ8BGI4 693 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Znf428Q8C1M2 176 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 GptQ8QZR5 496 aa10.3□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Sos1Q62245 1319 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Trim25Q61510 634 aaKnown RBP10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Prkab2Q6PAM0 271 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Zscan22Q8BGS5 496 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Slx4ipQ9D7Y9 413 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Nphp1Q9QY53 687 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 ShprhQ7TPQ3 1674 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 FancaQ9JL70 1439 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 1700017N19RikA0A087WPJ1 469 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Kif3cO35066 796 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Myd88P22366 296 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Asic4Q7TNS7 539 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ankrd23Q812A3 306 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Odf2lQ9D478 642 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Adgrl1Q80TR1 1466 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Jakmip2D3YXK0 820 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Prkar2bP31324 416 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Brd2Q7JJ13 798 aaKnown RBP10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ifi35Q9D8C4 286 aa10.29□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Vwa3bJ9JI28 736 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Zrsr2Q62377 462 aaKnown RBP10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Maats1Q8BRC6 783 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ess2O70279 479 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Anapc15P60007 132 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Nol8Q3UHX0 1147 aaKnown RBP10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Kiaa0319Q5SZV5 1081 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Nrbp1Q99J45 535 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ppfibp2O35711 882 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 RtcbQ99LF4 505 aaKnown RBP10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Zcrb1Q9CZ96 217 aaKnown RBP10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ankrd50F7BE84 1390 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Btn2a2A4QPC6 514 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Gpatch3Q8BIY1 525 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Arhgap23Q69ZH9 1483 aa10.28□□□□□ -0.76
Col28a1-201ENSMUST00000115537 CrcpO35427 148 aa10.27□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Map3k2Q61083 619 aa10.27□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Irf9Q61179 399 aa10.27□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms