RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Bin1O08539 588 aaKnown RBP17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 NppbP40753 121 aa17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 MicalclQ9D5U9 680 aa17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Wdr62Q3U3T8 1523 aa17.44■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ift57Q8BXG3 429 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Fam213aQ9CYH2 218 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Tmco5aQ9D9D5 303 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Lamc3Q9R0B6 1581 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Gm1043A0A140LJC2 1431 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Tbc1d8bA3KGB4 1114 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Map2k1P31938 393 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ranbp6Q8BIV3 1105 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Zbtb43Q9DAI4 467 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Uchl5Q9WUP7 329 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Cnksr2Q80YA9 1032 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Zscan29E9Q5B4 869 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ano2Q8CFW1 1002 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ginm1Q91WR6 327 aa17.43■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Dzip1lQ499E4 774 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Atf7Q8R0S1 413 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Taf12Q8VE65 161 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Krt79Q8VED5 531 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Krt23Q99PS0 422 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ktn1Q61595 1327 aaKnown RBP17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Fam135aQ6NS59 1506 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ctage5Q8R311 779 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Mcm3P25206 812 aaKnown RBP17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Sil1Q9EPK6 465 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Prpf40aQ9R1C7 953 aaKnown RBP17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Rbbp8nlA2ABX0 614 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Dnaaf4Q8R368 420 aa17.42■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Slc27a3O88561 667 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Myl3P09542 204 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Atp2b4Q6Q477 1205 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Abtb2Q7TQI7 1024 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Fancd2Q80V62 1450 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Usp37Q8C0R0 979 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Tshz3Q8CGV9 1081 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Kif21aQ9QXL2 1672 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ddx19aQ61655 478 aaKnown RBP17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Haus2Q9CQS9 234 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Hsf2bpQ9D4G2 338 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Skap1Q3UUV5 355 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Usp33Q8R5K2 909 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Pcdhb5Q91XZ5 792 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Naip2Q9QUK4 1447 aa17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 DroshaQ5HZJ0 1373 aaKnown RBP17.41■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Cnnm2Q3TWN3 875 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Cadps2Q8BYR5 1297 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ccdc112A0AUP1 442 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 SrrtQ99MR6 875 aaKnown RBP17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Eid1Q9DCR4 169 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Gm4758L7N258 96 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Tom1l2Q5SRX1 507 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Mtmr7Q9Z2C9 660 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Kdm5bQ80Y84 1544 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Polr3aB2RXC6 1390 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ythdc2B2RR83 1445 aaKnown RBP17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Dnm1P39053 867 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Ccdc66Q6NS45 935 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Rbm10Q99KG3 930 aaKnown RBP17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Mx2Q9WVP9 655 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Sestd1Q80UK0 696 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Pde1cQ64338 706 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Irs4Q9Z0Y7 1216 aa17.4■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 Lrrc43Q3V0L5 667 aa17.39■□□□□ 0.38
Ccdc50-203ENSMUST00000100026 AqrQ8CFQ3 1481 aaKnown RBP17.39■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Grm8P47743 908 aa17.39■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 StambpQ9CQ26 424 aa17.39■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Hmg20bQ9Z104 317 aa17.39■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Dapk3O54784 448 aa17.39■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 GnaqP21279 359 aa17.39■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Baiap2l1Q9DBJ3 514 aa17.39■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 GancQ8BVW0 898 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Eif4g1Q6NZJ6 1600 aaKnown RBP17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Ppp4r3aQ6P2K6 820 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Tbc1d5Q80XQ2 815 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Cabp5Q9JLK3 173 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 L1td1Q587J6 782 aaKnown RBP17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Tekt3Q6X6Z7 490 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Hoxb7P09024 217 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Otud6bQ8K2H2 294 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Bloc1s2Q9CWG9 143 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Fam184aE9PW83 1143 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 U2af1l4Q8BGJ9 220 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Dnajc5bQ9CQ94 199 aa17.38■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Kif5bQ61768 963 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Pram1Q6BCL1 675 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Shtn1Q8K2Q9 631 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Gps2Q921N8 327 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Krt15Q61414 452 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Cavin1O54724 392 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Stat1P42225 749 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Atp6v1aP50516 617 aaKnown RBP17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Gm21985Q6P6P5 1106 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Pik3ap1Q9EQ32 811 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 EvcP57680 1005 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 MpndQ3TV65 487 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Rab3il1Q8VDV3 383 aa17.37■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Mpp4Q6P7F1 635 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms